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MetabolomicsBased on the Metabolomic Approach the Energy Metabolism Responses of Oriental River Prawn Macrobrachium nipponense Hepatopancreas to Acute Hypoxia and Reoxygenation
Hypoxia represents a major physiological challenge for prawns and is a problem in aquaculture. Therefore, an understanding of the metabolic response mechanism of economically important prawn species to hypoxia and re-oxygenation is essential. However, little is known about the intrinsic mechanisms b...
2021-05-17 | MTBLS584 | MetaboLights
TranscriptomicsExpression data from leaf of (P. tomentosa x P. bolleana) x P. tomentosa under elevated CO2 concentrations
The atmosphere CO2 concentration keeps increasing every year. Use the Affymetrix poplar gene chip to confirm the expression changes in key genes in the triploid white poplar due to the influence of elevated CO2 concentrations. We used microarrays to detail the global programme of gene expression und...
ORGANISM(S): (Populus tomentosa x Populus bolleana) x Populus tomentosa 
2014-05-24 | E-GEOD-55216 | biostudies-arrayexpress
GenomicsDNA Cytosine Hydroxymethylation Levels Are Distinct Among Peripheral Blood Leukocytes
Peripheral blood leukocytes are the most commonly used surrogates to study epigenome-induced risk and epigenomic response to disease related stress. We considered the hypothesis that the TET enzyme catalyzed hydroxymethylation of 5mC to 5hmC might vary among peripheral blood leukocytes and reflect t...
ORGANISM(S): Homo sapiens 
2016-07-05 | E-GEOD-70519 | biostudies-arrayexpress
TranscriptomicsDrosophila Ecdysone Receptor Study
We used the DamID method to systematically identify the binding sites of Ecdysone Receptor and its heterodimeric partner USP across the whole genome in Drosophila Kc cells. We find that the EcR sites are a subset of the USP sites and that only a proportion are ecdysone regulated from an accompanying...
ORGANISM(S): Drosophila melanogaster 
2008-05-01 | E-GEOD-9156 | biostudies-arrayexpress
GenomicsmodENCODE_Lieb and White Lab: unltra-deep sequencing data of genomic DNA, chromatin input, and ChIP of Su(Hw) and H3K36me3 from S2 cells on Illumina Genome Analyzer.
This is a dataset generated by the modENCODE Project. It contains both the pair-end and single-end sequencing data of genomic DNA, chromatin input and the ChIP of the factors Su(Hw) and H3K36me3 from Drosophila S2 cells and it was generated on Illumina Genome Analyzer. The goal was to sequence ~120M...
ORGANISM(S): Drosophila melanogaster 
2011-03-04 | E-GEOD-27679 | biostudies-arrayexpress
TranscriptomicsLivers from lean or fat muscle lines fed low or high lipid diets
We used fish from two divergent lines of rainbow trout, selected for low or high muscle fat content (respectively L and F lines) and fed two different diets, containing either 10% (LE diet) or 23% (HE diet) lipids. For more details about experimental fish and diets, see Kolditz et al.,Am J Physiol R...
ORGANISM(S): Oncorhynchus mykiss 
2008-09-01 | E-GEOD-12031 | biostudies-arrayexpress
UnknownPeripheral Administration of NMU Promotes White Adipose Tissue Beiging and Improves Glucose Tolerance.
Not available
S-EPMC8373479 | biostudies-literature
UnknownAngiotensin II Promotes White Adipose Tissue Browning and Lipolysis in Mice.
Not available
S-EPMC9253869 | biostudies-literature
TranscriptomicsA Genome-wide mRNA Screen and Functional Analysis Reveal FOXO3 as a Candidate Gene for Chicken Growth
The objective of this study was to identify candidate genes associated with chicken growth and investigate their potential mechanisms. We used RNA-Seq to study the breast muscle transcriptome in high and low tails of Recessive White Rock (WRRh, WRRl) and Xinghua chickens (XHh, XHl). A total of 60, 2...
ORGANISM(S): Gallus gallus 
2015-08-27 | E-GEOD-72424 | biostudies-arrayexpress
TranscriptomicsM. tuberculosis transcriptional profile of delta pepD strain vs wild-type strain
pepD is regulated by a 2CS, MprAB, and impacts upon the regulation of sigE, an important M.tb sigma factor. Here we examine the global impact of gene regulation in a delta pepD mutant strain. Analysis compares total RNA from early log growth cultures of both wild-type and a delta pepD strain.
ORGANISM(S): Mycobacterium tuberculosis 
2009-10-29 | E-GEOD-17587 | biostudies-arrayexpress
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