Who - OmicsDI

OmicsDI

Browse
Submit Data
Databases
API
Help

320502 Results

Show all Save search Copy query

Show results for

Unknown (297781)
Genomics (9457)
Transcriptomics (8772)
Clinical (1735)
Proteomics (1457)
Metabolomics (526)
Genomic (426)
Methylation profiling (171)
Other (118)
Models (38)
Multiomics (9)

Organisms

Homo sapiens (6504)
Mus musculus (2065)
Arabidopsis thaliana (308)
Drosophila melanogaster (247)
Saccharomyces cerevisiae (240)
Rattus norvegicus (185)
Caenorhabditis elegans (98)
Danio rerio (86)
Escherichia coli (47)
Gallus gallus (41)
Sus scrofa (39)
Schizosaccharomyces pombe (37)
Zea mays (29)
Bos taurus (26)
Candida albicans (22)
Streptomyces coelicolor (21)
Xenopus laevis (21)
Escherichia coli str. K-12 substr. MG1655 (20)
Apis mellifera (20)
Hordeum vulgare (17)
Glycine max (16)
Escherichia coli K-12 (16)
Mycobacterium tuberculosis (16)
Sinorhizobium meliloti (15)
Taeniopygia guttata (15)
Daphnia magna (14)
Oryza sativa Japonica Group (14)
Oryza sativa (13)
Severe acute respiratory syndrome coronavirus 2 (7)
Lactococcus lactis (1)

Organisms

Homo sapiens (4097)
Mus musculus (324)
human gut metagenome (80)
human metagenome (26)
Anopheles funestus (22)
Rattus norvegicus (20)
Escherichia coli (18)
Staphylococcus aureus (17)
Macaca mulatta (16)
human oral metagenome (16)
Anopheles gambiae (15)
human vaginal metagenome (13)
Mycobacterium tuberculosis (12)
Klebsiella pneumoniae (12)
Sus scrofa (10)
Plasmodium falciparum (10)
Faecalibacterium prausnitzii (9)
Acinetobacter baumannii (9)
metagenome (9)
Heligmosomoides polygyrus bakeri (8)
Human immunodeficiency virus 1 (8)
Bacteria (8)
unidentified (8)
Culex pipiens (7)
Drosophila melanogaster (7)
feces metagenome (7)
Heligmosomoides polygyrus (6)
Anopheles marshallii (6)
Anopheles darlingi (6)
Anopheles coluzzii (6)

Repository

ENA (7748)
biostudies-arrayexpress (7591)
geo (2437)
EGA (782)
MassIVE (605)
MetaboLights (505)
pride (444)
dbGaP (426)
jPOST (123)
iProX (116)
PAXDB (78)
PanoramaPublic (43)
GNPS (20)
BioModels (19)
PeptideAtlas (17)
Cell Collective (13)
EVA (9)
FAIRDOMHub (6)
ExpressionAtlas (2)
MetabolomicsWorkbench (1)
NODE (1)

Tissue

Blood plasma (60)
Brain (48)
Blood serum (35)
Cell culture (33)
Epithelial cell (24)
Blood (16)
Liver (13)
Blood cell (12)
Saliva (12)
Urine (12)
Lung (11)
Cerebrospinal fluid (9)
Heart (9)
Fibroblast (7)
B cell (6)
Colon (5)
Cell suspension culture (4)
Lymph node (4)
Monocyte (4)
Ovary (4)
Skin (4)
Whole body (4)
Dental plaque (3)
Kidney (3)
Macrophage (3)
Malignant cell (3)
Milk (3)
Neutrophil (3)
Blood (1)
Bone marrow CD45+ cells (1)

Disease

Normal (40)
Colorectal cancer (23)
Breast cancer (22)
Glioblastoma (19)
COVID-19 (14)
Glioblastoma multiforme (5)
Reference (5)
Infiltrating ductal carcinoma (3)
Prostate carcinoma (3)
Adenocarcinoma (3)
Pancreatic cancer (2)
High grade glioblastoma (2)
Primary tumor (2)
Breast adenocarcinoma (2)
Chronic lymphocytic leukemia (2)
Sarcoma (2)
Prostate cancer (2)
Breast carcinoma (2)
Acute myeloid leukemia (2)
Multiple sclerosis (1)
Cancer (1)
Astrocytoma (1)
High risk B-precurser acute lymphoblastic leukemia (1)
Astrocytomas (1)
XCGD (1)
Non-classic glioblastoma (1)
Tumor bearing (1)
Early onset preeclampsia (1)
Lymphoblastic leukemia (1)
Responder to preoperative radiotherapy (1)

Technology Type

Illumina HiSeq 2000 (22)
Illumina HiSeq 2500 (6)
Illumina MiSeq (6)
Illumina Genome Analyzer II (6)
Illumina HiSeq 2500, ILLUMINA (5)
ILLUMINA, Illumina HiSeq 2000 (5)
ILLUMINA, Illumina HiSeq 2500 (4)
Aperio (2)
Illumina (2)
Illumina HumanCoreExome BeadChip array (1)
Illumina CytoSNP 12 bead array, nanostring (1)
HiSeq X Ten (ILLUMINA), HiSeq X Ten, ILLUMINA (1)
NextSeq 500, ILLUMINA (1)
HiSeq X Ten, Illumina HiSeq 2000, Illumina MiSeq, ILLUMINA, Illumina HiSeq 2500 (1)
OXFORD_NANOPORE, ILLUMINA, MinION, HiSeq X Ten (1)
Illumina HiSeq 2000 (ILLUMINA), Illumina HiSeq 1500 (ILLUMINA) (1)
Illumina HiSeq 2000, HiSeq X Ten, Illumina HiSeq 2500, ILLUMINA (1)
OXFORD_NANOPORE, MinION (1)
Illumina HumanMethylation450K, Illumina HiSeq 2500, Illumina InfiniumCoreExome-24v1-1_A, ILLUMINA (1)
ILLUMINA, Illumina HiSeq 2500, Illumina HumanMethylation450K, Illumina InfiniumCoreExome-24v1-1_A (1)
ILLUMINA, Illumina HiSeq 4000 (1)
Illumina HiSeq 2500, Illumina HiSeq 4000, ILLUMINA, NextSeq 500 (1)
ILLUMINA, HiSeq X Ten (1)
Complete Genomics, COMPLETE_GENOMICS (1)
Complete Genomics (COMPLETE_GENOMICS) (1)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten (1)
IlluminaHuman HT12, IlluminaHuman AWG-6 and HT12 (1)
Illumina HumanMethylation450 (1)
Illumina 450K, Bisulfite-Seq (1)
Illumina 450K-chip (methylation data) (1)

Instrument Platform

Illumina NovaSeq 6000 (221)
Illumina HiSeq 2000 (134)
Illumina HiSeq 2500 (131)
NextSeq 500 (128)
Illumina HiSeq 4000 (111)
Illumina MiSeq (26)
NextSeq 550 (24)
Illumina NovaSeq X (21)
Illumina Genome Analyzer IIx (19)
NextSeq 2000 (16)
Agilent G2565AA and G2565BA Microarray Scanner (15)
Axon GenePix 4000B scanning hardware (14)
AB SOLiD 4 System (10)
Illumina Genome Analyzer II (9)
BGISEQ-500 (8)
Illumina HiSeq 1500 (8)
Illumina HiSeq 3000 (8)
Dell PowerEdge R750; CPU: 2 × Intel Xeon Gold 6346 (32 Cores / 64 Threads); RAM: 188 GB (7)
NucleoSpin RNA/Protein kit lysis buffer (350 µL per tube; Macherey‑Nagel). (6)
ScanArray Express HT (6)
Ion Torrent Proton (6)
Illumina HiSeq 1000 (6)
See manuscript (5)
FastPrep‑24 homogenizer (MP Biomedicals) (4)
G2565AA DNA microarray scanner [Agilent] (4)
GenePix 4000B [Axon Instruments] (4)
Scanning hardware (4)
None (4)
NA (4)
DNBSEQ-G400 (4)

Publication Date

2014 (1058)
2013 (1035)
2015 (956)
2010 (924)
2012 (870)
2011 (718)
2025 (692)
2016 (664)
2024 (567)
2022 (539)
2023 (531)
2026 (497)
2008 (418)
2021 (407)
2020 (381)
2019 (346)
2018 (310)
2009 (308)
2017 (245)
2007 (196)
2006 (76)
2005 (60)
2004 (31)
2003 (8)
2002 (3)
2001 (1)

UNIPROT ID/AC

1433B_HUMAN (50)
1433E_HUMAN (50)
1433F_HUMAN (50)
1433G_HUMAN (50)
1433S_HUMAN (50)
1433T_HUMAN (50)
1433Z_HUMAN (50)
2AAA_HUMAN (50)
2ABA_HUMAN (50)
2ABD_HUMAN (50)
3HIDH_HUMAN (50)
5NTC_HUMAN (50)
6PGD_HUMAN (50)
6PGL_HUMAN (50)
A0A087WVV2_HUMAN (50)
A0A0A6YYL6_HUMAN (50)
AATC_HUMAN (50)
AATM_HUMAN (50)
ABCE1_HUMAN (50)
ABR_HUMAN (50)
ACAD9_HUMAN (50)
ACBP_HUMAN (50)
ACINU_HUMAN (50)
ACLY_HUMAN (50)
ACOC_HUMAN (50)
ACON_HUMAN (50)
ACOX1_HUMAN (50)
ACSL1_HUMAN (50)
ACSL3_HUMAN (50)
Q14609 (1)

ENSEMBL ID

ENSDARG00000000103 (16)
ENSDARG00000001431 (16)
ENSDARG00000001915 (16)
ENSDARG00000001950 (16)
ENSDARG00000001993 (16)
ENSDARG00000002480 (16)
ENSDARG00000005039 (16)
ENSDARG00000005560 (16)
ENSDARG00000005791 (16)
ENSDARG00000006399 (16)
ENSDARG00000007219 (16)
ENSDARG00000009285 (16)
ENSDARG00000009484 (16)
ENSDARG00000010149 (16)
ENSDARG00000010478 (16)
ENSDARG00000013078 (16)
ENSDARG00000016301 (16)
ENSDARG00000016393 (16)
ENSDARG00000017014 (16)
ENSDARG00000017624 (16)
ENSDARG00000018404 (16)
ENSDARG00000020008 (16)
ENSDARG00000021124 (16)
ENSDARG00000022767 (16)
ENSDARG00000023323 (16)
ENSDARG00000024746 (16)
ENSDARG00000025012 (16)
ENSDARG00000025301 (16)
ENSDARG00000025350 (16)
ENSDARG00000025635 (16)

CHEBI ID

CHEBI:17154 (61)
CHEBI:16828 (53)
CHEBI:16467 (46)
CHEBI:16761 (37)
CHEBI:16675 (30)
CHEBI:15422 (2)
CHEBI:15846 (2)
CHEBI:15379 (2)
CHEBI:18367 (2)
CHEBI:5779 (1)
CHEBI:15688 (1)
CHEBI:16812 (1)
CHEBI:24996 (1)
CHEBI:16982 (1)
CHEBI:36559 (1)
CHEBI:32544 (1)
CHEBI:17380 (1)
CHEBI:15927 (1)
CHEBI:15763 (1)
CHEBI:16171 (1)
CHEBI:18304 (1)
CHEBI:16960 (1)
CHEBI:15343 (1)
CHEBI:30249 (1)
CHEBI:15346 (1)
CHEBI:16474 (1)
CHEBI:16908 (1)
CHEBI:18009 (1)
CHEBI:16444 (1)
CHEBI:15350 (1)

Metabolite Name

Creatinine (72)
Hypoxanthine (71)
Creatine (70)
Inosine (66)
L-Tyrosine (63)
Taurine (59)
Xanthine (59)
Choline (58)
Adenosine (58)
Uridine (58)
L-Tryptophan (56)
Glycine (55)
Guanosine (55)
Uracil (54)
L-Phenylalanine (53)
Leucine (50)
Adenine (50)
Guanine (49)
L-Valine (48)
Glycine (47)
Betaine (46)
L-Threonine (45)
L-Histidine (45)
Valine (44)
Phenylalanine (44)
Cytosine (44)
Phenylalanine (44)
Uric acid (44)
Citric acid (43)
Glutamine (43)

First Public Date

2025 (1147)
2024 (1055)
2026 (786)
2014 (755)
2023 (704)
2022 (686)
2021 (521)
2020 (440)
2019 (368)
2017 (303)
2018 (299)
2015 (246)
2013 (241)
2016 (175)
2011 (11)
2012 (10)
2010 (1)

Modelling Approach

Ordinary differential equation model (13)
Population model (2)
Mathematical model (1)
Metabolic network (1)
Other (1)

Study status

Completed (859)
Recruiting (336)
Not provided (134)
Terminated (124)
Not yet recruiting (117)
Active, not recruiting (97)
Withdrawn (36)
Ongoing (14)
Enrolling by invitation (8)
No longer available (4)
Suspended (3)
Available (2)
Approved for marketing (1)

Lab affiliation

Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (4)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry (4)
Executive Science Officer, BioFrontiers InstituteDistinguished ProfessorProfessor, Howard Hughes Medical Institute MOLECULAR CELLULAR AND DEVELOPMENTAL BIOLOGY CU DENVER SCHOOL OF MEDICINE (3)
Professor, Microbiology, Immunology, and Pathology Mycobacteria Research Laboratories Scientific Director, Rocky Mountain Regional Biocontainment Laboratory Editor-in-chief, BMC Mycobacteria (3)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital (3)
Radboud university medical center, Radboud Institute for Health Sciences, Department of Hematology The Netherlands (3)
UHN (3)
Vanderbilt University Department of Chemistry (3)
1 Department of Otorhinolaryngology - Head and Neck Surgery, University of Helsinki and HUS Helsinki University Hospital, P.O.Box 263, FI-00029 HUS, Helsinki, Finland 2 Department of Biosciences and Nutrition, Karolinska Institutet, SE-171 76, Stockholm, Sweden. 3 Research Program in Systems Oncology, Faculty of Medicine, University of Helsinki, Helsinki, Finland. (2)
Clarkson University (2)
Department of Biochemistry and Molecular Biology, University of Calgary, Alberta, Canada; Department of Physiology and Pharmacology, University of Calgary, Alberta, Canada; The Hotchkiss Brain Institute, University of Calgary, Alberta, Canada; McCaig Institute for Bone and Joint Health, University of Calgary, Alberta, Canada (2)
Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota 55905, United States (2)
Department of Life and Environmental Sciences, University of Cagliari (2)
Department of Microbial Proteomics, University of Greifswald, Greifswald, Germany (2)
Head of Laboratory Neuro-Oncology, Clinical and Cancer Proteomics, Neurology (2)
Institute of Bioinformatics, Bangalore - 560066, India (2)
Institute of Clinical Sciences, Department of Oncology, Lund University, Sweden (2)
Medical University of Vienna (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (2)
School of Biomedical Sciences, University of Plymouth, UK (2)
State Key Laboratory of Oncology in South China (2)
The Fifth Affiliated Hospital of Guangzhou Medical University (2)
Tianjin Medical University General Hospital (2)
Traditional Chinese Medicine Hospital Affiliated to Xinjiang Medical University (2)
Wellcome Trust Sanger Institute (2)
1 National Institute of Parasitic Diseases, Chinese Center for Disease Control and Prevention (Chinese Center for Tropical Diseases Research); NHC Key Laboratory of Parasite and Vector Biology; WHO Collaborating Center for Tropical Diseases; National Center for International Research on Tropical Diseases, Shanghai 200025, China 2 The School of Global Health, Chinese Center for Tropical Diseases Research, Shanghai Jiao Tong University School of Medicine, Shanghai 200025, China (1)
1. University of Edinburgh, Wellcome Trust Centre for Cell Biology, Edinburgh, United Kingdom. 2. Technische Universität Berlin, Institute of Biotechnology, Department of Bioanalytics, Berlin, Germany. (1)
1: Macquarie Medical School, Faculty of Medicine, Health and Human Sciences, Macquarie University, NSW, Australia 2: School of Medical Sciences, Faculty of Medicine and Health, University of Sydney, NSW, Australia (1)
1Platelet Proteomics Group, Center for Research in Molecular Medicine and Chronic Diseases (CIMUS), Universidade Santiago de Compostela; and Instituto de Investigación Sanitaria de Santiago (IDIS), Santiago de Compostela, Spain. (1)

Keyword

Stage IV colon cancer (135)
Recurrent colon cancer (133)
Fluorouracil (130)
Leucovorin (124)
Stage IV rectal cancer (123)
Irinotecan (121)
Recurrent rectal cancer (120)
Oxaliplatin (108)
Bevacizumab (90)
Levoleucovorin (87)
Adenocarcinoma of the colon (83)
Adenocarcinoma of the rectum (81)
Stage III colon cancer (75)
Capecitabine (75)
Stage III rectal cancer (69)
Calcium (67)
Cetuximab (66)
Small intestine lymphoma (40)
Stage II colon cancer (36)
Colonoscopy (35)
Stage II rectal cancer (35)
Recurrent grade 1 follicular lymphoma (31)
Recurrent grade 2 follicular lymphoma (31)
Recurrent pancreatic cancer (31)
Recurrent adult diffuse large cell lymphoma (30)
Recurrent small lymphocytic lymphoma (30)
Recurrent marginal zone lymphoma (30)
Recurrent grade 3 follicular lymphoma (30)
Recurrent mantle cell lymphoma (30)
Extranodal marginal zone B-cell lymphoma of mucosa-associated lymphoid tissue (30)

IsPrivate

False (19)

Submitter Keywords

Immuno-oncology (4)
COVID-19 (3)
Not Peer Reviewed (2)

Classification

bacteria (216)
viruses (40)
protozoa (27)
fungi (15)
helminths (9)

Modification

15.994915 (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
4x(2)H labeled dimethylated residue (1)
57.021464 (1)
N6 (1)
Not available (1)

Study type

Transcription profiling by array (4321)
RNA-seq of coding RNA (1070)
ChIP-seq (503)
Comparative genomic hybridization by array (213)
Unknown experiment type (174)
Methylation profiling by array (163)
RNA-seq of coding RNA from single cells (139)
Other (126)
RNA-seq of non coding RNA (121)
ChIP-chip by tiling array (112)
Methylation profiling by high throughput sequencing (72)
Genotyping by array (62)
MicroRNA profiling by array (50)
RNA-seq of total RNA (48)
Transcription profiling by tiling array (47)
DNA-seq (45)
ChIP-chip by array (42)
Transcription profiling by RT-PCR (25)
Animal - High-throughput sequencing (22)
Cell line - High-throughput sequencing (21)
Proteomic profiling by array (16)
Transcription profiling by SAGE (15)
ATAC-seq (13)
RNAi profiling by array (10)
Spatial transcriptomics by high-throughput sequencing (8)
RIP-seq (8)
Human - High-throughput sequencing (7)
Plant - High-throughput sequencing (7)
Cell line - One-color microarray (7)
CLIP-seq (7)

Release Date

2022 (43364)
2023 (37900)
2021 (35854)
2025 (34683)
2024 (32046)
2020 (25984)
2019 (18855)
2018 (15756)
2017 (12070)
2016 (9834)
2015 (8495)
2014 (6907)
2013 (4887)
2026 (4452)
2012 (3712)
2011 (2865)
2010 (2690)
2009 (1577)
2008 (1230)
2007 (641)
2006 (483)
2005 (315)
2004 (209)
2003 (144)
2002 (130)
2001 (110)
2000 (86)
1999 (50)
1998 (32)
1997 (3)

Location

United States (651)
United Kingdom (205)
China (134)
Australia (129)
France (126)
Spain (122)
Germany (118)
Italy (114)
Canada (103)
Japan (93)
Netherlands (81)
Belgium (72)
South Korea (64)
Denmark (51)
Poland (40)
Austria (40)
Sweden (36)
Iran (33)
Taiwan (32)
Switzerland (31)
Brazil (29)
Russia (26)
India (25)
New Zealand (25)
Czechia (25)
Hong Kong (24)
Hungary (24)
Portugal (21)
Israel (21)
Turkey (18)

Previous page
1 / 32051
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 32051
Next page

Sort by:

Relevance

Page size

Metabolomic Profiling in Early Pregnancy using Pre-Diagnostic Sera from Women Who Developed Placental Abruption

Not available

ORGANISM(S): Homo sapiens

ST000405 | MetabolomicsWorkbench

Quantitative proteomics of the 2016 WHO Neisseria gonorrhoeae reference strains identifies vaccine candidates and antimicrobial resistance signatures.

Neisseria gonorrhoeae is the causative agent of gonorrhea, a leading sexually transmitted disease with severe complications on reproductive health. The U.S. Centers for Disease Control and Prevention has categorized the public health threat induced by N. gonorrhoeae as “urgent”, due to the ease of t...

ORGANISM(S): Neisseria gonorrhoeae FA6140 Neisseria gonorrhoeae

2018-12-19 | PXD008412 | Pride