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TranscriptomicsNitrogen-regulated genes in Fusarium fujikuroi
Genome-wide search for AreA-dependent and -independent nitrogen-regulated genes in Fusarium fujikuroi by cross-species hybridization with F. verticillioides microarrays. Keywords: glutamine treatmet Compare expression of genes of Fusarium fujikuroi wild-type and areA mutant strains responding to ni...
ORGANISM(S): Gibberella fujikuroi 
2010-05-15 | E-GEOD-10692 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouseB-cell lymphomas with defined genetic alterations in p53 or p73
Induction of apoptosis by the tumor suppressor p53 is known to protect from Myc-driven lymphomagenesis. The p53 family member p73 is also a pro-apoptotic protein, which is activated in response to oncogenes like Myc. We therefore investigated whether p73 provides a similar protection from Myc-driven...
ORGANISM(S): Mus musculus 
2008-12-05 | E-MEXP-1620 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse expressing human Cathepsin L inhibitor hurpin, skin alterations and increased carcinogenesis.
Aim of this study was to identify gene expression differences in the skin of hurpin (=headpin=serpinB13) transgenic mice in comparison to wildtype mice. Experiment Overall Design: Comparison of 4 transgenic mice with 3 wildtype mice. One wildtye sample was used two times. Experiment Overall Design:...
ORGANISM(S): Mus musculus 
2008-06-13 | E-GEOD-5236 | biostudies-arrayexpress
UnknownProperties of an inward-facing state of LeuT: conformational stability and substrate release.
Not available
S-EPMC4375683 | biostudies-literature
TranscriptomicsTranscription profiling of Arabidopsis wild type Col-0 and hsf407 double knock out plants after heat stress
Effect of heat stress on wildtype COL-0 Arabidopsis and hsf4-7 double knock out plants.
ORGANISM(S): Arabidopsis thaliana 
2008-12-31 | E-MEXP-1725 | biostudies-arrayexpress
TranscriptomicsTranscriptome analysis reveals a major impact of Tyk2 on the expression of interferon responsive and metabolic genes
Peritoneal macrophages of Tyk2-/- and wildtype (wt) mice were compared before and after six hours of LPS treatment. Interferon responsive genes are lower expressed in Tyk2-/- macrophages at the basal level, metabolic genes higher before, but even more after LPS treatment. cDNA from macrophages from ...
ORGANISM(S): Mus musculus 
2010-04-01 | E-GEOD-19733 | biostudies-arrayexpress
TranscriptomicsComparison of the expression profiles of wild type (WT) and Oct-6-deficient (Oct-6-/-) macrophages in response to poly(I:C) treatment
Identification of target genes of the POU-transcription factor Oct-6 in macrophages after poly(I:C) treatment WT and Oct-6-/- fetal-liver macrophages were treated with poly(I:C) for 8 hours or were left untreated (3 independent expreiments = biological replicates). 200 genes differentially regulated...
ORGANISM(S): Mus musculus 
2010-08-01 | E-GEOD-22691 | biostudies-arrayexpress
ProteomicsSirt2 regulates liver metabolism in a sex-specific manner
Sirtuin-2 (Sirt2), an NAD+-dependent lysine deacylase enzyme, has previously been implicated as a regulator of glucose metabolism, but the specific mechanisms remain poorly defined. Here, we observed that Sirt2-/- males, but not females, have decreased body fat, moderate hypoglycemia upon fasting, a...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
2024-07-19 | MSV000095391 | MassIVE
ProteomicsMultiplexed, scheduled high resolution sMRM-HR acquisition on full scan MS/MS instruments
Advances in software and high resolution, high mass accuracy mass spectrometers have expanded their functionality beyond traditional data dependent acquisition (DDA) methods. Using a single platform, an orthogonal quadrupole time-of flight (QqTOF) mass spectrometer, the TripleTOF 5600, we have inve...
ORGANISM(S): Bos Taurus (ncbitaxon:9913) Escherichia Coli (ncbitaxon:562) Saccharomyces Cerevisiae (ncbitaxon:4932) 
2015-03-10 | MSV000079077 | MassIVE
ProteomicsA.thaliana - Whole organism, SC (Motohashi,plant_physiol,2012)
abundance based on Spectral counting, Interaction consistency score: 6.0, Coverage: 6
ORGANISM(S): 3702 
2012-00-00 | 2208543227 | PAXDB
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