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ProteomicsDSSO Crosslinking of Intact Tetrahymena Thermophila Cilia
The MS-cleavable crosslinker, DSSO, was added to cilia isolated from Tetrahymena thermophila. After digestion crosslinked peptides were enriched by size exclusion chromatography. Data were collected using an MS2/MS3 method. Analysis was done using the XlinkX node of PD2.3 and a fasta file generat...
ORGANISM(S): Tetrahymena Thermophila (ncbitaxon:5911) 
2022-07-19 | MSV000089917 | MassIVE
ProteomicsDSSO Crosslinking of Partially Purified IFT-A from Tetrahymena thermophila
DSSO crosslinking data from two Tetrahymena thermophila samples: IEX fractions from chromatography of a cilia extract, and IFT-A-enriched fractions from preparative SEC of cilia extract.
ORGANISM(S): Tetrahymena Thermophila (ncbitaxon:5911) 
2022-03-25 | MSV000089131 | MassIVE
UnknownVismodegib Exerts Targeted Efficacy Against Recurrent Sonic Hedgehog-Subgroup Medulloblastoma: Results From Phase II Pediatric Brain Tumor Consortium Studies PBTC-025B and PBTC-032.
Not available
S-EPMC4534527 | biostudies-literature
ProteomicsExtracellular matrix proteome remodeling with substrate stiffness
Extracellular matrix proteomic profiling Mass spectrometry characterization illustrated a reprogrammed proteome in response to matrix stiffness, including a core subset of 84 ECM-specific proteins, including various ECM regulators and tissue-associated ECM-related proteins. Further, we observe remod...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000092971 | MassIVE
ProteomicsMultiomic analysis of PI3K in Atrial Myopathy
Here, we undertook comprehensive physiological and molecular analyses in cardiac-specific transgenic mice with increased or decreased PI3K to assess the dose response impact of directly regulating PI3K. Elevated PI3K was associated with a dose-dependent increase in heart size, and preserved/enhanced...
ORGANISM(S): Mus Musculus (ncbitaxon:10090) 
MSV000092855 | MassIVE
UnknownEcological Networks in Stored Grain: Key Postharvest Nodes for Emerging Pests, Pathogens, and Mycotoxins.
Not available
S-EPMC4718207 | biostudies-literature
TranscriptomicsPerivascular Human Endometrial Mesenchymal Stem Cells Express Pathways Relevant to Self-Renewal, Lineage Specification, and Functional Phenotype
A population of endometrial cells displaying key properties of mesenchymal stem cells (eMSC) has been identified in human endometrium. eMSC co-express CD146 and PDGFRB surface markers, have a perivascular location, and likely represent the reservoir of progenitors giving rise to the endometrial str...
ORGANISM(S): Homo sapiens 
2011-11-14 | E-GEOD-31152 | biostudies-arrayexpress
TranscriptomicsSeminal plasma induces global transcriptomic changes associated with cell migration, proliferation and viability in endometrial epithelial cells and stromal fibroblasts.
Exposure of eEC and eSF to SP in vitro increases expression of genes and secreted proteins associated with cellular migration, proliferation, viability and inhibition of cell death. This is a cross sectional study involving control samples versus treatment. SP (pooled from twenty donors) was first t...
ORGANISM(S): Homo sapiens 
2014-05-07 | E-GEOD-57356 | biostudies-arrayexpress
UnknownCellular anatomy of the mouse primary motor cortex.
Not available
S-EPMC8494646 | biostudies-literature
ProteomicsColumbia River sediment HUM-V (Hyporheic Uncultured Microbial and Viral) database metaproteome
Metaproteomic data for Rodriguez-Ramos, et al. interrogating microbial and viral communities of hyporheic river sediments within the Columbia River. Samples were digested with trypsin, and analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline.
ORGANISM(S): Environmental Samples <bacteria> (ncbitaxon:48479) 
2021-04-28 | MSV000087330 | MassIVE
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