Williams Caroline C

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Transcriptomics (33)
Unknown (18)
Genomics (7)
Metabolomics (2)
Genomic (1)

Organisms

Homo sapiens (19)
Mus musculus (7)
Rattus norvegicus (6)
Arabidopsis thaliana (4)
Streptomyces lividans (1)
Equus caballus (1)
Schizosaccharomyces pombe (1)
Plasmodium falciparum (1)

Repository

biostudies-arrayexpress (36)
EGA (4)
MetaboLights (2)
dbGaP (1)

Disease

ACUTE MYELOID LEUKEMIA (2)
Normal (2)
Injured (1)
Idiopathic myelofibrosis (1)
Breast Normal (1)
Epithelioid mesothelioma (1)
CHRONIC LYMPHOCYTIC LEUKEMIA (1)
NORMAL (1)
Model of metabolic syndrome (1)
No lesions (1)
Challenged with Pieris rapae larvae (1)
Melanoma (1)

Technology Type

Mass spectrometry assay (2)

Instrument Platform

ScanArray scanning hardware (2)
Scanning hardware (2)
ScanArray 4000 [PerkinElmer] (1)
Illumina HiSeq 2500 (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2010 (11)
2008 (4)
2015 (3)
2013 (3)
2007 (3)
2014 (2)
2012 (2)
2006 (2)
2026 (2)
2024 (1)
2020 (1)
2016 (1)
2011 (1)
2009 (1)
2004 (1)

CHEBI ID

CHEBI:1127735 (1)
CHEBI:127762 (1)
CHEBI:134216 (1)
CHEBI:1427 (1)
CHEBI:15354 (1)
CHEBI:15355 (1)
CHEBI:15366 (1)
CHEBI:15428 (1)
CHEBI:15603 (1)
CHEBI:15727 (1)
CHEBI:15728 (1)
CHEBI:15729 (1)
CHEBI:15741 (1)
CHEBI:15891 (1)
CHEBI:15908 (1)
CHEBI:15940 (1)
CHEBI:15971 (1)
CHEBI:16020 (1)
CHEBI:16135 (1)
CHEBI:16259 (1)
CHEBI:16347 (1)
CHEBI:16359 (1)
CHEBI:16411 (1)
CHEBI:16414 (1)
CHEBI:16437 (1)
CHEBI:16450 (1)
CHEBI:16467 (1)
CHEBI:16543 (1)
CHEBI:16704 (1)
CHEBI:16709 (1)

Metabolite Name

(+)-S,S-Ethambutol (1)
(+)-Thioctic acid (1)
(+)-yohimbine (1)
(+/-)-Camphoric acid (1)
(+/-)-Hesperetin (1)
(+/-)-Metanephrine (1)
(-)-Oxycodone (1)
(-)-Oxymorphone (1)
(-)-Shikimic acid (1)
(-)-secoisolariciresinol (1)
(12-Methyl-7-tetraphenyl)methyl hydrogen sulfate (1)
(2E)-3-(3,4-Dimethoxyphenyl)acrylic acid (1)
(2E)-3-(4-Hydroxy-3-methoxyphenyl)-N-(4-oxobutyl)acrylamide (1)
(2E)-3-Methyl-4-(sulfooxy)-2-butenoic acid (1)
(2E)-N-[2-(Dihydroxymethyl)-4-hydroxy-5-methoxyphenyl]-3-(4-hydroxy-3-methoxyphenyl)acrylamide (1)
(2R)-1-{[(2-Aminoethoxy)(hydroxy)phosphoryl]oxy}-3-hydroxy-2-propanyl (6Z,9Z,12Z,15Z)-6,9,12,15-octadecatetraenoate (1)
(2R,3R)-2-(3,4-Dihydroxyphenyl)-5,7-dihydroxy-3,4-dihydro-2H-chromen-3-yl 4-hydroxybenzoate (1)
(2R,3S)-3-Hydroxy-8-methyl-8-azabicyclo[3.2.1]octane-2-carboxylic acid (1)
(2S)-3-(1H-Imidazol-4-yl)-2-({[(3S,4S,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)tetrahydro-2-furanyl]methyl}amino)propanoic acid (non-preferred name) (1)
(2S)-6-Amino-2-[(E)-(hydroxymethylene)amino]hexanimidic acid (1)
(2Z)-(2,6-Dihydroxy-3,4-dimethoxycyclohexylidene)acetonitrile (1)
(3S)-3-{[(2E)-3-Carboxy-2-propenoyl]oxy}-4-(trimethylammonio)butanoate (1)
(3S)-3-{[(2E)-4-Carboxy-2-butenoyl]oxy}-4-(trimethylammonio)butanoate (1)
(3S,4S)-7,12-Dimethyl-3,4-dihydro-3,4-tetraphenediol (1)
(4-Ethoxyphenyl)urea (1)
(4E)-2-Amino-3-oxo-4-undecenoic acid (1)
(4R,5S,9S,10R,12S,13S)-1,5,9-Trimethyl-11,14,15,16-tetraoxatetracyclo[10.3.1.0~4,13~.0~8,13~]hexadecan-10-ol (1)
(4S)-4-[(2E,4Z)-2,4-Decadienoyloxy]-4-(trimethylammonio)butanoate (1)
(4beta,8alpha,9R)-6'-Methoxycinchonan-3,9-diol (1)
(5R,6Z,8E,10E,12S,14Z)-5,12,20,20,20-Pentahydroxy-6,8,10,14-icosatetraenoic acid (1)

Study type

Transcription profiling by array (25)
MicroRNA profiling by array (7)
ChIP-seq (3)
RNA-seq of coding RNA (1)

Release Date

2010 (11)
2021 (6)
2022 (5)
2008 (4)
2015 (3)
2013 (3)
2007 (3)
2023 (3)
2024 (2)
2020 (2)
2014 (2)
2012 (2)
2006 (2)
2016 (1)
2011 (1)
2009 (1)
2004 (1)
2025 (1)
2017 (1)

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Biochemical changes in Robinia pseudoacacia leaflets in dependence of leaf mining, plant age and location

Plant responses to leaf-mining insects are still poorly studied, especially in woody species. Robinia pseudoacacia is widely cultivated in Ukraine, where it is not native. There, the trees are facing increasing damage from the likewise introduced leaf miner species Parectopa robiniel...

2026-03-20 | MTBLS14099 | MetaboLights

Expression Analysis of Mammary Epithelial Cells Isolated from 12-16 Week Old Virgin C57Bl6 Lrp5+/+ and Lrp5-/- Mice

Investigation of whole-genome gene expression level changes in C57Bl6 Lrp5-/- mammary epithelial cells, compared to the wild-type strain. The mammary epithelial cells were isolated from numbers 4 and 5 mammary glands. The Lrp5-/- mouse strain described in this study has been further described in Lin...

ORGANISM(S): Mus musculus

2010-05-19 | E-GEOD-19228 | biostudies-arrayexpress

Genomic Predictors of Combat Stress Vulnerability and Resilience

The Genomic Predictors of Combat Stress Vulnerability and Resilience Study was designed to probe the likely hereditary basis for risk or resilience to develop PTSD and other trauma spectrum disorders. The overall guiding hypothesis was that genomic variation gives rise to risk/susceptibility trai...

phs000864 | dbGaP

Transcription profiling of A. thaliana wild type plants challenged for 5h with Pieris rapae larvar to investigate damage response

Arabidopsis wild-type plants challenged for 5 h with larvae of Pieris rapae

ORGANISM(S): Arabidopsis thaliana

2006-12-04 | E-MEXP-911 | biostudies-arrayexpress

Atra effect on ERBB2 and RARA-coamplified SKBR-3 cells.

RNA was extracted with Rneasy Micro Kit (Qiagen, France) from SKBR3 cells treated with 1 uM ATRA. The quantity and purity of the extracted RNA was evaluated using a NanoDropTM spectrophotometer and its integrity measured using an Agilent BioanalyzerTM. For microarray hybridizations, 500 ng of total ...

ORGANISM(S): Homo sapiens

2012-03-02 | E-MTAB-1013 | biostudies-arrayexpress

Transcription profiling of A. thaliana acd2-2 mutants leaves with spontaneous lesions vs. leaves without lesions

Arabidopsis acd2-2 mutant was used. Leaves conataining spontaneous lesions were compared to leaves without lesions

ORGANISM(S): Arabidopsis thaliana

2006-12-04 | E-MEXP-912 | biostudies-arrayexpress

Tempo-Seq experiment relating to Next Generation Risk Assessment for Occupational Chemical Safety – a Real World Example with Sodium-2-hydroxyethane sulfonate

A dose response and human cell line comparison of transcriptional responses following treatment with the chemical compound Sodium-2-hydroxyethane sulfonate. Gene expression changes were used to estimate the POD - minimum effect concentration when a biological perturbation as estimated by gene exp...

ORGANISM(S): Homo sapiens

2024-12-31 | E-MTAB-14069 | biostudies-arrayexpress

Transcription profiling of rat proximal and distal colonic epithelium after azoxymethane treatment

Comparison of global gene expression in the proximal and distal colonic epithelium in azoxymethane treated rats. Experiment Overall Design: Ten male Sprague Dawley rats weighing approximately 245 Â± 14.5 g were housed in wire-bottomed caging in a temperature controlled room (22-24Â°C) with a 12 h li...

ORGANISM(S): Rattus norvegicus

2009-01-13 | E-GEOD-13802 | biostudies-arrayexpress

eIF4F is a nexus of resistance to anti-BRAF and anti-MEK cancer therapies

The amounts of eIF4G and eIF4B were decreased in the vemurafenib-treated sensitive A375 cell line. To find mechanisms behind this decrease, we sought to identify the genes whose expression changes after vemurafenib treatment in A375 cells as compared to Mel624 cells by using microarrays.

ORGANISM(S): Homo sapiens

2014-12-30 | E-MTAB-2607 | biostudies-arrayexpress

Transcription profiling of human tumours at baseline and after 21 days of treatment with sorafenib and dacarbazine

Background New approaches are needed to improve prognostic accuracy for treatment response and to explore the complexities of drug effects on human tumours. We developed a strategy of global genomic investigation of sequential tumor biopsies at baseline and 21 days post-treatment, and applied this ...

ORGANISM(S): Homo sapiens

2010-07-31 | E-TABM-760 | biostudies-arrayexpress

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61 Results

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