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TranscriptomicsTranscription Profiling of Formalin-Fixed Paraffin-Embedded Samples and fresh frozen samples by Affymetrix Microarrays as a qualitative assessment
Background: To date, few studies have systematically characterized microarray gene expression signal performance with degraded RNA from formalin-fixed paraffin-embedded (FFPE) specimens in comparison to intact RNA from unfixed fresh-frozen (FF) specimens. Methodology: RNA was extracted and isolated ...
ORGANISM(S): Homo sapiens 
2010-11-25 | E-GEOD-19249 | biostudies-arrayexpress
UnknownSubstrate vibrations during courtship in three Drosophila species.
Not available
S-EPMC3829934 | biostudies-literature
TranscriptomicsIdentification of the 3' end of the pig miRNA by the RAKE technology [platform 1: 9003467]
We applied a new computational approach to predict specie-specific and conserved miRNAs, than experimentally confirmed by a modified RNA-primed Array-based Klenow Extension (RAKE) method. We identified 489 conserved and 1,178 pig-specific novel miRNAs increasing our tally of confirmed miRNAs to 1,66...
ORGANISM(S): Sus scrofa 
2014-03-31 | E-GEOD-28137 | biostudies-arrayexpress
TranscriptomicsIdentification of the 3' end of the pig miRNA by the RAKE technology [platform 2: 9003179]
We applied a new computational approach to predict specie-specific and conserved miRNAs, than experimentally confirmed by a modified RNA-primed Array-based Klenow Extension (RAKE) method. We identified 489 conserved and 1,178 pig-specific novel miRNAs increasing our tally of confirmed miRNAs to 1,66...
ORGANISM(S): Sus scrofa 
2014-03-31 | E-GEOD-28138 | biostudies-arrayexpress
UnknownAntispila oinophylla new species (Lepidoptera, Heliozelidae), a new North American grapevine leafminer invading Italian vineyards: taxonomy, DNA barcodes and life cycle.
Not available
S-EPMC3288679 | biostudies-literature
UnknownEndogenous florendoviruses are major components of plant genomes and hallmarks of virus evolution.
Not available
S-EPMC4241990 | biostudies-literature
UnknownHyperfractionated or accelerated radiotherapy in lung cancer: an individual patient data meta-analysis.
Not available
S-EPMC4934452 | biostudies-literature
TranscriptomicsLong noncoding intronic RNAs are differentially expressed in primary and metastatic pancreatic cancer
Pancreatic ductal adenocarcinoma (PDAC) is known by its aggressiveness and lack of effective therapeutic options. Thus, improvement in current knowledge of molecular changes associated with pancreatic cancer is urgently needed to explore novel venues of diagnostics and treatment of this dismal disea...
ORGANISM(S): Homo sapiens 
2011-12-31 | E-GEOD-30134 | biostudies-arrayexpress
TranscriptomicsPhysical mapping of bread wheat chromosome 5A: an integrated approach
The huge size, the redundancy and the great repeated portion of the bread wheat genome [Triticum aestivum (L.)], placed it among the most difficult species to be sequenced and dissected at the genetic, structural and evolutionary levels. To overcome the limitations, a strategy based on the genome co...
ORGANISM(S): Triticum aestivum 
2015-08-13 | E-GEOD-66996 | biostudies-arrayexpress
TranscriptomicsCRISPR screen exploring resistance to AKTi (Capivasertib) in ER+ Breast Cancer in MCF7, T47D and CAMA-1 cell lines
A genome-wide CRISPR-Cas9 knockout screen was performed in the breast cancer cell lines T47D, MCF7, and CAMA-1 to identify genes modulating sensitivity and resistance to capivasertib, a selective AKT inhibitor. Cells were transduced with a CRISPR library, followed by treatment with capivasertib or v...
ORGANISM(S): Homo sapiens 
2026-05-25 | E-MTAB-16438 | biostudies-arrayexpress
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