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TranscriptomicsMammosphere
Comparison of different culture conditions of the human breast cancer cell line SUM149. We cultured the cells adherent in standard medium in normal cell culture flasks and as mammospheres in MammoCult (stemcell technologies) in ultra low-attachment flasks
ORGANISM(S): Homo sapiens 
2013-08-18 | E-MTAB-1553 | biostudies-arrayexpress
UnknownCD4<sup>+</sup> T cells with convergent TCR recombination reprogram stroma and halt tumor progression in adoptive therapy.
Not available
S-EPMC11560124 | biostudies-literature
TranscriptomicsTranscriptional profiling of human kidney samples to discover gene signatures of progression and metastasis in renal cell cancer
In order to address the progression, metastasis, and clinical heterogeneity of renal cell cancer (RCC), transcriptional profiling with oligonucleotide microarrays (22,283 genes) was done on 49 RCC tumors, 20 non-RCC renal tumors, and 23 normal kidney samples. Samples were clustered based on gene exp...
ORGANISM(S): Homo sapiens 
2009-04-28 | E-GEOD-15641 | biostudies-arrayexpress
UnknownHuman Nasal Turbinate Tissues in Organ Culture as a Model for Human Cytomegalovirus Infection at the Mucosal Entry Site.
Not available
S-EPMC7495380 | biostudies-literature
UnknownHuman Nasal and Lung Tissues Infected Ex Vivo with SARS-CoV-2 Provide Insights into Differential Tissue-Specific and Virus-Specific Innate Immune Responses in the Upper and Lower Respiratory Tract.
Not available
S-EPMC8223920 | biostudies-literature
ProteomicsA therapeutically tractable dependency on nonsense-mediated decay for cellular homeostasis and immune control in small cell lung cancer
Small cell lung cancer (SCLC) is among the deadliest cancers with excessive somatic alterations, expectedly resulting in immunogenic epitopes. However, patient benefit from immunotherapy is limited. We found abundant frameshift mutations in SCLC, regarded as highly immunogenic, counterbalanced by a ...
ORGANISM(S): Homo sapiens (Human) 
2026-09-14 | PXD066995 | Pride
Nonsense-mediated decay  lung cancer  sclc  immunopeptidomics  neoepitope  data-independent aquisitiona  faims  parallel reaction monitoring 
UnknownThe molecular mechanism of on-demand sterol biosynthesis at organelle contact sites.
Not available
S-EPMC11100823 | biostudies-literature
GenomicOncoArray: Prostate Cancer

Original description of the study: From ELLIPSE (linked to the PRACTICAL consortium), we contributed ~78,000 SNPs to the OncoArray. A large fraction of the content was derived from the GWAS meta-analyses in European ancestry populations (overall and aggressive disease; ~27K SNPs). We also ...

phs001391 | dbGaP
UnknownA multi-layer functional genomic analysis to understand noncoding genetic variation in lipids.
Not available
S-EPMC9388392 | biostudies-literature
UnknownDifferential and shared genetic effects on kidney function between diabetic and non-diabetic individuals.
Not available
S-EPMC9192715 | biostudies-literature
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