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TranscriptomicsAnalysis of the RDR6-dependent ein5 ski2 profile in Arabidopsis
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2015-04-15 | E-GEOD-52409 | biostudies-arrayexpress
TranscriptomicsAnalysis of the RDR6-dependent small RNA profile in ein5 ski2 in Arabidopsis with biological replications and increased sequencing depth
Post-transcriptional gene silence (PTGS) is employed in plants to shut down transgenes, invading viral genes and a certain group of endogenous genes. Meanwhile, it is not clear how the risk of expansive PTGS from endogenous genes featured by transitive siRNA production is minimized. Here we demonstr...
ORGANISM(S): Arabidopsis thaliana 
2015-04-13 | E-GEOD-57936 | biostudies-arrayexpress
TranscriptomicsAnalysis of the RDR6-dependent ein5 ski2 transcriptome profile in Arabidopsis
Post-transcriptional gene silence (PTGS) is employed in plants to shut down transgenes, invading viral genes and a certain group of endogenous genes. Meanwhile, it is not clear how the risk of expansive PTGS from endogenous genes featured by transitive siRNA production is minimized. Here we demonstr...
ORGANISM(S): Arabidopsis thaliana 
2015-04-13 | E-GEOD-52407 | biostudies-arrayexpress
UnknownEffectiveness of various COVID-19 vaccine regimens among 10.4 million patients from the National COVID Cohort Collaborative during Pre-Delta to Omicron periods - United States, 11 December 2020 to 30 June 2022.
Not available
S-EPMC10730423 | biostudies-literature
ProteomicsHuman hepatocellular carcinoma MHCC97H proteome
In this work, we generated a MHCC97H proteome datasets by In-gel digestion on Orbitrap Fusion Lumos. We systematically compared RNC-seq and Ribo-seq in the context of proteome identification, especially when identifying protein isoforms from AS. We also demonstrated that the single-molecule long rea...
ORGANISM(S): Homo sapiens (Human) 
2022-06-28 | PXD032201 | Pride
Human In-gel digestion Liver Mhcc97h Lc-ms/ms 
ProteomicsPhysical and chemical niche of human growth plate for polarized bone development
The significantly enriched proteins in growth plate-epiphysis interface compared to growth plate and epiphysis and the significantly enriched proteins in growth plate-metaphysis interface compared to growth plate and metaphysis;
ORGANISM(S): Homo Sapiens 
2025-01-16 | PXD059908 |
UnknownWhole-Transcriptome Profiling and Functional Prediction of Long Non-Coding RNAs Associated with Cold Tolerance in Japonica Rice Varieties.
Not available
S-EPMC10889138 | biostudies-literature
MetabolomicsMulti-omics analysis reveals ToMMV-induced regulation of amino acid and phenylpropanoid biosynthesis pathways affecting tomato fruit quality and resistance

Tomato mottle mosaic virus (ToMMV) is a major threat to cultivating tomatoes and other solanaceous plants. Here, an infectious clone of the ToMMV Huludao isolate was constructed, and ToMMV infection significantly reduces soluble sugar, soluble phenolic and vitamin C ...

2025-09-01 | MTBLS12864 | MetaboLights
ProteomicsProteome sequencing of uterus at different eggshell strenghten and thickness of hens
In this study, we employed proteomics to investigate the differences between the uteruses of laying hens with high- or low-breaking-strength shells.
ORGANISM(S): Gallus Gallus 
2020-09-14 | PXD021449 |
ProteomicsCharacterization of COVID-19 survivors 6-month after discharge
we applied quantitative proteomic and metabolomic approach to analyze plasma samples from health subjects and COVID-19 survivors six months after discharge
ORGANISM(S): Homo Sapiens 
2022-01-19 | PXD025148 |
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