Wu Liang L - OmicsDI

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Unknown (3674)
Transcriptomics (448)
Proteomics (104)
Genomics (74)
Metabolomics (33)
Multiomics (3)

Organisms

Homo sapiens (263)
Mus musculus (161)
Arabidopsis thaliana (28)
Caenorhabditis elegans (18)
Rattus norvegicus (13)
Saccharomyces cerevisiae (12)
Danio rerio (12)
Oryza sativa (7)
Drosophila melanogaster (6)
Escherichia coli (6)
Pseudomonas aeruginosa (5)
Schizosaccharomyces pombe (3)
Mycobacterium tuberculosis (3)
Nitrosomonas europaea ATCC 19718 (2)
Methanobrevibacter smithii ATCC 35061 (2)
Gossypium hirsutum (2)
mixed sample (2)
Gallus gallus (2)
Sus scrofa (2)
Delphinapterus leucas (1)
Phaseolus coccineus (1)
Bacillus anthracis str. Ames (1)
Haloferax mediterranei (1)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (1)
Phaseolus vulgaris (1)
Brassica oleracea (1)
Petrolisthes cinctipes (1)
Methanobrevibacter smithii (1)
Rhodopseudomonas palustris (1)
environmental samples (1)

Organisms

Solanum tuberosum (1)

Repository

biostudies-arrayexpress (510)
iProX (58)
pride (36)
MetaboLights (33)
EGA (14)
MassIVE (6)
PeptideAtlas (3)
ENA (1)

Tissue

Cell culture (14)
Liver (6)
Others (3)
Brain (3)
Colon (2)
Embryo (2)
Epithelial cell (2)
Posterior silk gland (2)
Blood (1)
Blood cell (1)
Blood plasma (1)
Embryonic stem cell (1)
Fat body (1)
Gland (1)
Head (1)
Intestine (1)
Kidney (1)
Leaf (1)
Ovary (1)
Permanent cell line cell (1)
Silk gland (1)
Skin (1)
Spleen (1)
Testis (1)

Disease

Colon cancer (3)
Normal (2)
Astrocytoma (1)
Endometrioid carcinoma (1)
Progressive skeletal muscle myopathy (1)
Bladder cancer (1)
Colon carcinoma (1)
Not infected (1)
Tumor (1)
Melanoma (1)
Brain cancer (1)
Cholangiocarcinoma (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (36)
Mass spectrometry (29)
Shotgun proteomics (21)
Gel-based experiment (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Bottom-up proteomics (3)
Illumina HiSeq 2000, ILLUMINA (2)
Mass spectrometry assay (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Proteogenomics (2)
Top-down proteomics (2)
Illumina HiSeq 2000, Illumina_2.5M (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy assay (1)
NMR spectroscopy (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)
DiaPASEF (1)
SWATH MS (1)

Instrument Platform

Illumina NovaSeq 6000 (20)
Illumina HiSeq 2000 (12)
Illumina HiSeq 4000 (7)
N/A (6)
Chromium Next GEM Single Cell Multiome ATAC + Gene Expression Reagent Bundle, (4)
10X Genomics reagent kit (4)
418 [Affymetrix] (3)
GenePix 4000B [Axon Instruments] (3)
NextSeq 500 (3)
10X Chromium Nuclei Isolation Kit (2)
Illumina Genome Analyzer (2)
Illumina Genome Analyzer IIx (2)
Illumina Genome Analyzer II (2)
Chromium Next GEM Single Cell Multiome Reagent Bundle (1)
10X Genomics reagents (1)
10X Chromium On-Chip Multiplex (1)
10x Chromium with a target of 5,000 cells. Chromium Single Cell 3’ Library & Gel Bead Kit v2 (1)
Illumina Hiseq 2000 (1)
ScanArray Express HT [PerkinElmer] (1)
ScanArray 4000XL [PerkinElmer] (1)
Affymetrix Fluidics Station 400 (1)
NA (1)
Illumina HiSeq X (1)
NextSeq 2000 (1)
BGISEQ-500 (1)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
MaXis (1)
Orbitrap Fusion (1)
Orbitrap Fusion Lumos (1)

Publication Date

2014 (78)
2013 (74)
2011 (65)
2012 (60)
2010 (48)
2015 (46)
2016 (38)
2022 (24)
2021 (24)
2009 (24)
2008 (24)
2025 (20)
2020 (19)
2019 (16)
2024 (13)
2023 (13)
2007 (12)
2026 (10)
2006 (4)
2018 (3)
2017 (3)
2005 (1)
2004 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:16828 (12)
CHEBI:17351 (12)
CHEBI:18050 (11)
CHEBI:16704 (11)
CHEBI:17895 (11)
CHEBI:17295 (11)
CHEBI:15428 (10)
CHEBI:16015 (10)
CHEBI:30915 (10)
CHEBI:16919 (10)
CHEBI:17191 (10)
CHEBI:16643 (10)
CHEBI:17368 (10)
CHEBI:30769 (10)
CHEBI:16708 (9)
CHEBI:17750 (9)
CHEBI:16467 (9)
CHEBI:18183 (9)
CHEBI:17053 (9)
CHEBI:30805 (8)
CHEBI:16040 (8)
CHEBI:16750 (8)
CHEBI:17196 (8)
CHEBI:17115 (8)
CHEBI:16196 (8)
CHEBI:16335 (8)
CHEBI:17568 (8)
CHEBI:17509 (8)
CHEBI:18019 (8)
CHEBI:17203 (8)

Metabolite Name

Adenosine (10)
L-Tyrosine (10)
Hypoxanthine (10)
Thymidine (8)
L-Valine (8)
L-Phenylalanine (8)
Cytosine (7)
L-Tryptophan (7)
Adenine (7)
Guanosine (7)
Creatine (7)
L-Leucine (7)
Glycine (6)
L-Proline (6)
L-Arginine (6)
Indole (6)
4-Hydroxybenzaldehyde (6)
L-Glutamine (6)
Uric acid (6)
L-Serine (6)
Xanthine (6)
Creatinine (6)
L-Isoleucine (6)
L-Methionine (6)
Inosine (6)
Uracil (5)
Kynurenic acid (5)
L-Asparagine (5)
Choline (5)
Taurine (5)

First Public Date

2025 (1)

Study type

Transcription profiling by array (293)
RNA-seq of coding RNA (60)
ChIP-seq (51)
RNA-seq of non coding RNA (19)
Comparative genomic hybridization by array (16)
RNA-seq of coding RNA from single cells (15)
Other (7)
Methylation profiling by high throughput sequencing (7)
Unknown experiment type (6)
Methylation profiling by array (6)
Single nucleus RNA sequencing (5)
ChIP-chip by tiling array (4)
Human - Single-cell sequencing (2)
ChIP-chip by array (2)
RNA-seq of total RNA (2)
Transcription profiling by high throughput sequencing (1)
Cell line - Single-cell sequencing (1)
Animal - Single-cell sequencing (1)
Transcription profiling by tiling array (1)
RNAi profiling by array (1)
Genotyping by array (1)
CLIP-seq (1)
Antigen profiling (1)
Transcription profiling by RT-PCR (1)
RIP-seq (1)
ScATAC-seq (1)
MicroRNA profiling by array (1)
DNA-seq (1)

Release Date

2025 (592)
2022 (511)
2023 (449)
2024 (443)
2021 (430)
2020 (288)
2019 (191)
2018 (174)
2016 (167)
2014 (146)
2017 (143)
2015 (143)
2013 (111)
2026 (91)
2011 (86)
2012 (80)
2010 (61)
2009 (28)
2008 (25)
2007 (14)
2006 (5)
2005 (5)
2004 (1)

Lab affiliation

College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Hepatobiliary Surgery, Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Guangxi academy of fishery sciences (1)
Institute of Systems Biomedicine, Peking University Health Science Center, Beijing 100191, China. (1)
Peking University (1)
School of Basic Medical Sciences, Anhui Medical University, (1)
School of Medicine, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China. (1)
School of Medicine, Shanghai University, Shanghai 200444, China. (1)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (1)
State Key Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, Beijing 100005, China (1)
Sun Yat-Sen University (1)
Sun Yat-sen university (1)
Tea Research Institute (CAAS), China (1)
The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China; The First Affiliated Hospital of Harbin Medical University (1)
The Key Laboratory of Industrial Biotechnology, Ministry of Education, School of Biotechnology, Jiangnan University, 1800 Lihu Avenue, Wuxi 214122, Jiangsu, China (1)
The University of Newcastle (1)
Tsinghua University (1)
University of Science and Technology of China (1)
Wenzhou Medical University (1)
Westlake University (1)
sun yat-sen memorial hospital (1)

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3C-seq of HT29 cells with CCAT1-L knockdown or scramble knockdown

CCAT1-L is a highly expressed long noncoding RNA located in the colorectal cancer specific super enhance region about 500 kb upstream of MYC gene. Knockdown of CCAT1-L significantly down-regulated interaction frequency between CCAT1 and MYC locus and repress MYC expression, suggesting a long-range c...

ORGANISM(S): Homo sapiens

2014-02-22 | E-GEOD-55261 | biostudies-arrayexpress

A Combined Proteomic and Metabolomic Strategy for Allergens Characterization in Natural and Fermented Brassica napus Bee Pollen

Bee pollen is consumed for its nutritional and pharmacological benefits, but it also contains hazardous allergens which has not been identified. Here, we identified 2 potential allergens, glutaredoxin and oleosin-B2, in Brassica napus (B. napus) bee pollen using mass spectrometr...

2022-03-23 | MTBLS3950 | MetaboLights

DNA Methylation Mediated by a MicroRNA Pathway

In plants, the known microRNAs (miRNAs) are produced as ~21 nucleotide (nt) duplexes from their precursors by Dicer like 1 (DCL1). They are incorporated into Argonaute 1 (AGO1) protein to regulate target gene expression primarily through mRNA cleavage. We report here the discovery of a new class of ...

ORGANISM(S): Oryza sativa

2010-03-12 | E-GEOD-20748 | biostudies-arrayexpress

Impulse control deficits among patients with nonsuicidal self-injury: a mediation analysis based on structural imaging.

Not available

S-EPMC11882201 | biostudies-literature

Receptor-specific crosstalk between prostanoid E receptor 3 and bombesin receptor subtype 3.

Not available

S-EPMC5956246 | biostudies-literature

Polycystin-2 expression is regulated by a PC2-binding domain in the intracellular portion of fibrocystin.

Not available

S-EPMC2581563 | biostudies-literature

New and noteworthy boletes from subtropical and tropical China.

Not available

S-EPMC6401544 | biostudies-literature

Integrative transcriptome and proteome revealed high-yielding mechanisms of epsilon-poly-L-lysine by Streptomyces albulus

ε-poly-L-lysine (ε-PL) is a high value, widely used natural antimicrobial peptide additive for foods and cosmetic products that is mainly produced by S. albulus. In previous work, we developed the high-yield industrial strain S. albulus WG-608 through successive rounds of engineering. Here, we use i...

ORGANISM(S): Streptomyces sp. A494 Ydz-AH

2023-07-20 | PXD036099 | Pride

RNA-seq from paired human CRC/control mucosa samples

We have used RNA-seq to examine gene expression from paired human CRC/control mucosa samples and identified CRC-specific expressed long noncoding RNAs To identify CRC-specific expressed genes, including long noncoding RNAs

ORGANISM(S): Homo sapiens

2014-02-22 | E-GEOD-55259 | biostudies-arrayexpress

Designing a Biostable L-DNAzyme for Lead(II) Ion Detection in Practical Samples.

Not available

S-EPMC5650247 | biostudies-literature

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4335 Results

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