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TranscriptomicsTranscription profiling of rat ileum mucosa and Peyers patches in the small intestine at different time points following Salmonella infection
Time dependent effect of Salmonella infection on host gene expression in vivo in the ileum mucosa and Peyer’s patches.
ORGANISM(S): Rattus norvegicus 
2007-04-02 | E-MEXP-636 | biostudies-arrayexpress
TranscriptomicsmRNA Sequencing Reveals Altered Synaptic Vesicular Transport in Post-Mortem Cerebellum
Schizophrenia (SCZ) is a common, disabling mental illness with high heritability but complex, poorly understood genetic etiology. As the first phase of a genomic convergence analysis of SCZ, we generated 16.7 billion nucleotides of short read, shotgun sequences of cDNA from post-mortem cerebellar c...
ORGANISM(S): Homo sapiens 
2009-08-29 | E-GEOD-12297 | biostudies-arrayexpress
TranscriptomicsATAC-sequencing of murine alveolar macrophages after IL-33 treatment
ATAC-sequencing of murine alveolar macrophages after 3 I.T. doses of PBS (control) or IL-33 treatment.
ORGANISM(S): Mus musculus 
2025-12-12 | E-MTAB-16048 | biostudies-arrayexpress
UnknownBifidobacterium animalis: the missing link for the cancer-preventive effect of Gynostemma pentaphyllum.
Not available
S-EPMC8381792 | biostudies-literature
ModelsLi2019 - In Silico mechanistic model for proarrhythmia risk prediction under the CiPA initiative
The International Council on Harmonization (ICH) S7B and E14 regulatory guidelines are sensitive but not specific for predicting which drugs are pro‐arrhythmic. In response, the Comprehensive In Vitro Proarrhythmia Assay (CiPA) was proposed that integrates multi‐ion channel pharmacology data in vitr...
2021-11-26 | MODEL2111260002 | BioModels
TransQST 
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of RNAs bound by DDX5 and RORgt in cultured T helper 17 cell [RIP-seq]
Purpose: The goals of this study are to compare RNAs bound by DDX5 and RORgt in cultured T helper 17 cell in wildtype background. Methods: Th17 mRNA profiles of 48hrs in vitro cultured T helper 17 cells from wild-type mice were generated by deep sequencing, using Illumina HighSeq. The sequence read...
ORGANISM(S): Mus musculus 
2015-12-21 | E-GEOD-70109 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Facilitates Quantitative Analysis of Wild Type, DDX5 knockout, RORc knockout, RmrpG262T knockin T helper 17 cell Transcriptomes [RNA-seq]
Purpose: The goals of this study are to compare in vitro polarized T helper 17 cell transcriptome profiling (RNA-seq) in different genetic background. Methods: Th17 mRNA profiles of 96hrs in vitro cultured T helper 17 cells from wild-type and mutant mice were generated by deep sequencing, using Ill...
ORGANISM(S): Mus musculus 
2015-12-21 | E-GEOD-70108 | biostudies-arrayexpress
UnknownRacial differences in the association of body mass index and ovarian cancer risk in the OCWAA Consortium.
Not available
S-EPMC9681872 | biostudies-literature
UnknownCombinatorial protein barcodes enable self-correcting neuron tracing with nanoscale molecular context.
Not available
S-EPMC12485930 | biostudies-literature
GenomicsGenome-Wide Analysis of Hypodiploid Acute Lymphoblastic Leukemia

Hypodiploid acute lymphoblastic leukemia (ALL) is an aggressive form of leukemia characterized by multiple whole chromosomal losses and very poor outcome. Here we report an integrative genomic analysis that identifies multiple subtypes of hypodiploid ALL characterized by variation in the degree o...

phs000341.v1.p1 | EGA
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