Wu Y Y - OmicsDI

Show results for

Unknown (84317)
Proteomics (1285)
Transcriptomics (554)
Genomics (238)
Metabolomics (119)
Models (9)
Multiomics (8)
Other (6)

Organisms

Homo sapiens (652)
Mus musculus (304)
Arabidopsis thaliana (36)
Caenorhabditis elegans (32)
Rattus norvegicus (27)
Oryza sativa (21)
Drosophila melanogaster (15)
Saccharomyces cerevisiae (15)
Gallus gallus (14)
Zea mays (11)
Oryza sativa Japonica Group (10)
Bos taurus (10)
Pseudomonas aeruginosa (6)
Vibrio cholerae (5)
cellular organisms (4)
Gossypium hirsutum (4)
Chlamydomonas reinhardtii (4)
Schizosaccharomyces pombe (4)
Bacillus subtilis (4)
Sus scrofa (4)
Danio rerio (4)
Haloarcula hispanica (3)
Citrus sinensis (3)
Nitrosomonas europaea ATCC 19718 (2)
Pan troglodytes (2)
Drosophila simulans (2)
Vitis vinifera (2)
Glycine max (2)
Ovis aries (2)
Pseudomonas aeruginosa M18 (1)

Organisms

Bahaba taipingensis (5)
Homo sapiens (3)
Mus musculus (2)
Camellia delicata (1)
Camellia longistyla (1)
Camellia mairei var. lapidea (1)
groundwater metagenome (1)
Oryza sativa (1)
Rattus norvegicus (1)

Repository

pride (675)
biostudies-arrayexpress (646)
iProX (468)
EGA (127)
MetaboLights (115)
PeptideAtlas (85)
MassIVE (44)
ENA (18)
BioModels (9)
jPOST (9)
GPMDB (6)
geo (4)
GNPS (4)
LINCS (3)
PAXDB (2)

Tissue

Cell culture (155)
Epithelial cell (45)
Liver (45)
Liver (44)
Brain (42)
Whole body (24)
Leaf (23)
Permanent cell line cell (23)
Testis (22)
Blood plasma (21)
Plant cell (21)
Blood serum (16)
Hepatocyte (16)
Plasma Non-glyco (13)
Heart (13)
Kidney (13)
Lung (12)
Root (12)
Stem cell (12)
T cell (11)
Cell suspension culture (10)
Colon (10)
HeLa cell (9)
Others (8)
Blood (8)
Embryo (8)
Fibroblast (8)
Brain (3)
Male Reproductive System (2)
Prefrontal Cortex (1)

Disease

Disease free (22)
Breast cancer (18)
Colon cancer (15)
Cervix carcinoma (7)
Malignant neoplasm of ovary (7)
Prostate adenocarcinoma (7)
Not Available (6)
Acute leukemia (6)
Alzheimer's disease (6)
Brain cancer (6)
Cardiovascular system disease (5)
Type 2 diabetes mellitus (4)
Wounds and Injuries (4)
Brain glioblastoma multiforme (3)
Hepatocellular carcinoma (3)
Influenza (3)
Liver cancer (3)
Liver carcinoma (3)
Melanoma (3)
Osteosarcoma (3)
Severe acute respiratory syndrome (3)
Acute kidney tubular necrosis (2)
Amyotrophic lateral sclerosis (2)
Cervical cancer (2)
Disease (2)
Hepatitis B (2)
Kidney cancer (2)
Mammary tumor (1)
Normal (1)
Alzheimer's Disease (1)

Technology Type

Mass Spectrometry (675)
Shotgun proteomics (375)
Mass spectrometry (96)
Bottom-up proteomics (71)
Data-dependent acquisition (57)
Gel-based experiment (54)
Affinity purification coupled with mass spectrometry proteomics (49)
SWATH MS (34)
Top-down proteomics (32)
Data-independent acquisition (18)
NMR spectroscopy (10)
Mass spectrometry assay (10)
Illumina HiSeq 2000 (9)
SRM/MRM (8)
Chemical cross-linking coupled with mass spectrometry proteomics (7)
Proteogenomics (7)
Mass spectrometry imaging (6)
Chemiluminescence (3)
ELISA (3)
Affinity proteomics (3)
All-ion fragmentation (3)
Illumina HiSeq 2000, Illumina_2.5M (2)
Illumina HiSeq 2000, ILLUMINA (2)
Illumina HiSeq 2000, Illumina Infinium HumanMethylation450 BeadChip, Affymetrix expression array, ILLUMINA (1)
Illumina HiSeq 2000, unknown (1)
Illumina 2.5M, Illumina HiSeq 2000 (1)
Illumina Genome Analyzer IIx, Illumina HiSeq 2000 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina HiSeq 2500 (1)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)

Instrument Platform

LTQ Orbitrap Velos (24)
Q Exactive (12)
Orbitrap Fusion Lumos (11)
Illumina HiSeq 2000 (8)
LTQ (8)
LTQ Orbitrap Elite (7)
Instrument (6)
Illumina Genome Analyzer IIx (5)
Illumina Genome Analyzer II (4)
Illumina HiSeq 2500 (4)
Illumina NovaSeq 6000 (4)
LTQ Orbitrap (4)
Illumina Genome Analyzer (3)
Q Exactive Plus (3)
HiSeq X Ten (2)
LTQ Orbitrap Velos Pro (2)
SYNAPT G2-Si (2)
TSQ Altis (2)
Xevo G2 XS Tof (2)
Xevo G2-XS QTof (2)
Orbitrap Exploris 480 (2)
Q Exactive HF (2)
418 [Affymetrix] (1)
Ion Torrent PGM (1)
NextSeq 2000 (1)
Illumina HiSeq 1000 (1)
Illumina HiSeq 4000 (1)
MS:1000031 (1)
Orbitrap Eclipse (1)
Orbitrap Elite mass spectrometer(Thermo) (1)

Publication Date

2022 (195)
2025 (162)
2023 (157)
2024 (135)
2014 (124)
2013 (124)
2021 (121)
2019 (105)
2015 (92)
2020 (83)
2011 (82)
2012 (73)
2010 (72)
2016 (68)
2026 (57)
2018 (46)
2017 (36)
2009 (24)
2008 (18)
2005 (10)
2006 (7)
2007 (4)
2004 (4)
2002 (2)
2003 (1)
2001 (1)

UNIPROT ID/AC

P17676 (2)
P15260 (2)
P67775 (2)
P62136 (2)
P08887 (2)
P40189 (2)
P01579 (2)
O14543 (2)
P42224 (2)
P40763 (2)
O60674 (2)
P05231 (2)
P01112 (2)
P04049 (2)
Q02750 (2)
P28482 (2)
Q07889 (2)
Q06124 (2)
P62993 (2)
O15524 (2)
P23458 (2)
14331_ORYSJ (2)
14332_ORYSJ (2)
14333_ORYSJ (2)
14334_ORYSJ (2)
14335_ORYSJ (2)
14336_ORYSJ (2)
2ABA_ORYSJ (2)
40G2_ORYSJ (2)
6PGD1_ORYSJ (2)

ENSEMBL ID

ENSG00000170477 (25)
ENSG00000147251 (10)
ENSG00000247315 (7)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (40)
CHEBI:16919 (39)
CHEBI:16704 (38)
CHEBI:16737 (36)
CHEBI:30769 (36)
CHEBI:15891 (35)
CHEBI:17596 (35)
CHEBI:16708 (34)
CHEBI:16040 (33)
CHEBI:17154 (33)
CHEBI:16335 (33)
CHEBI:15428 (32)
CHEBI:17750 (32)
CHEBI:15354 (32)
CHEBI:17562 (31)
CHEBI:17568 (31)
CHEBI:7916 (31)
CHEBI:16750 (29)
CHEBI:15741 (29)
CHEBI:32816 (29)
CHEBI:30915 (29)
CHEBI:17895 (29)
CHEBI:16235 (28)
CHEBI:17509 (28)
CHEBI:16027 (28)
CHEBI:15756 (28)
CHEBI:17351 (28)
CHEBI:15318 (27)
CHEBI:17748 (26)
CHEBI:17821 (26)

Metabolite Name

Hypoxanthine (28)
Creatinine (27)
Cytosine (25)
Adenosine (24)
Betaine (23)
Adenine (22)
Creatine (22)
Choline (21)
Uridine (20)
Cytidine (19)
Uracil (18)
L-Proline (18)
L-Arginine (18)
Xanthine (18)
L-Carnitine (18)
Glycine (17)
Taurine (17)
Inosine (17)
Cholic acid (16)
L-Glutamine (16)
Glycerophosphocholine (16)
L-Tyrosine (16)
Valine (15)
Guanine (15)
Linoleic acid (15)
Guanosine (15)
Thymidine (15)
L-Leucine (15)
L-Phenylalanine (15)
Leucine (14)

First Public Date

2026 (7)
2018 (3)
2014 (3)
2022 (2)
2025 (1)
2024 (1)
2013 (1)

Modelling Approach

Constraint-based model (5)
Ordinary differential equation model (4)

Lab affiliation

College of Animal Sciences, Zhejiang University, Hangzhou, P. R. China (9)
Institutes of Biomedical Sciences and department of Chemistry, Fudan University, Shanghai, China (6)
Department of Biochemistry and Biomedical Sciences McMaster University (5)
Northwest University (5)
Nankai University (4)
St. Jude Children's Research Hospital (4)
Sun Yat-sen University (4)
Center for Excellence in Molecular Cell Science, CAS (3)
Department of Clinical Laboratory, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (3)
Institute of Immunology and Department of Orthopaedics of the Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China (3)
Nanjing Medical University (3)
Peking University (3)
Shanghai Jiao Tong University (3)
State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200438, China (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
Third Military Medical University (3)
wuhan union hospital (3)
Army Medical University (Third Military Medical University) (2)
BGI-Shenzhen,China (2)
Beijing Friendship Hospital, Capital Medical University (2)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (2)
College of Plant Protection, Northwest A&F University (2)
Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center (2)
Department of Cardiology, Jiangbin Hospital of Guangxi Zhuang Autonomous Region, No. 85 Hedi Road, Nanning, Guangxi, 530021, China (2)
Department of Clinical Laboratory Medicine, Shanghai Tenth People’s Hospital of Tongji University, Shanghai, 200072, China (2)
Department of Endocrinology, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China. (2)
Department of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu 610041, China. (2)
Department of Radiation and Medical Oncology, Zhongnan Hospital of Wuhan University (2)
Department of Stomatology, Nanfang Hospital, Southern Medical University, Guangzhou, China, 510515 (2)
Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)

IsPrivate

False (9)

Submitter Keywords

COVID-19 (1)

Modification

57.021464 (3)
15.994915 (2)
Not available (2)
2x(15)N labeled L-lysine (1)
4-tetrahydrothiazine-3-carboxylic acid (1)
42.010565 (1)
4x(15)N labeled L-arginine (1)
71.037114 (1)

Study type

Transcription profiling by array (302)
RNA-seq of coding RNA (126)
ChIP-seq (71)
RNA-seq of non coding RNA (30)
Methylation profiling by high throughput sequencing (21)
Comparative genomic hybridization by array (19)
Unknown experiment type (16)
Other (15)
Methylation profiling by array (13)
ChIP-chip by tiling array (9)
Transcription profiling by tiling array (6)
Transcription profiling by RT-PCR (3)
RNA-seq of coding RNA from single cells (3)
ATAC-seq (2)
RNA-seq of total RNA (2)
Animal - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Genotyping by array (1)
CLIP-seq (1)
Antigen profiling (1)
MicroRNA profiling by array (1)
DNA-seq (1)

Release Date

2025 (13851)
2022 (11879)
2023 (10866)
2024 (10503)
2021 (8713)
2020 (6263)
2019 (4575)
2018 (3671)
2017 (3134)
2016 (2575)
2015 (2041)
2026 (1833)
2014 (1488)
2013 (1022)
2012 (725)
2011 (589)
2010 (404)
2009 (271)
2008 (215)
2007 (107)
2006 (72)
2005 (60)
2004 (34)
2003 (21)
2002 (15)
2001 (14)
2000 (8)
1999 (6)
1998 (5)
1996 (1)

Previous page
1 / 8654
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 8654
Next page

Sort by:

Relevance

Page size

The Pd (II) reduction mechanisms in Bacillus megaterium Y-4 revealed by proteomic analysis

Many studies have been conducted on microbial reduction of Pd (II) to palladium nanoparticles (PdNPs) due to the environmental friendliness, low cost and the decreased toxicity of Pd (II) ions. In this study, we investigate the reduction mechanism of Pd (II) by Bacillus megaterium Y-4 through proteo...

ORGANISM(S): environmental samples <bacteria

2024-05-24 | PXD049711 | Pride

Lc-msms Bacillus megaterium

Characterization of the complete chloroplast genome of a chinese endangered species Cymbidium wenshanense Y. S. Wu et F. Y. Liu.

Not available

S-EPMC10402856 | biostudies-literature

Differentially expressed proteins between WT Y. pestis and ΔhmwC

ORGANISM(S): Yersinia Pestis Co92

PXD042928 |

Camellia delicata isolate:Camellia delicata Y. K. Li

Camellia delicata isolate:Camellia delicata Y. K. Li Genome sequencing

PRJNA399245 | ENA

Protocol to detect RNAs from tissue sections in mice using Y-branched probe in situ hybridization.

Not available

S-EPMC9490196 | biostudies-literature

Influence of 17M-NM-2-estradiol on Gene Expression of Paracoccidioides During Mycelia-to-Yeast Transition

Background: Paracoccidioides is the causative agent of paracoccidioidomycosis, a systemic mycosis endemic to Latin America. Infection is initiated by inhalation of conidia (C) or mycelial (M) fragments, which subsequently differentiate into yeast (Y). Epidemiological studies show a striking predomin...

ORGANISM(S): Paracoccidioides brasiliensis Pb01

2011-12-14 | E-GEOD-30466 | biostudies-arrayexpress

Comparative transcriptomic analysis of normal and abnormal in vitro flowers in Cymbidium nanulum Y. S. Wu et S. C. Chen identifies differentially expressed genes and candidate genes involved in flower formation.

Not available

S-EPMC9638074 | biostudies-literature

Transcriptional modulation of the pre-implantation embryo-specific Rnf35 gene by the Y-box protein NF-Y/CBF.

Not available

S-EPMC1134964 | biostudies-literature

Camellia mairei var. lapidea isolate:Camellia lapidea Wu

Camellia mairei var. lapidea isolate:Camellia lapidea Wu Genome sequencing

PRJNA399237 | ENA

Retrieving Y chromosomal haplogroup trees using GWAS data.