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TranscriptomicsTranscriptomic modulations triggered by Xanthomonas oryzae pv oryzae inoculation in rice
The transcriptomic modulations leading to defense response in rice one hour after inoculation by Xanthomonas oryzae pv oryzae. Xoo and mock inoculated plant of cultivars IET8585 (bacterial leaf blight resistant) and IR-24 (bacterial leaf blight susceptible) were compared.
ORGANISM(S): Oryza sativa 
2012-03-12 | E-MEXP-3388 | biostudies-arrayexpress
TranscriptomicsTranscriptome Profiling of Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv. oryzicola
This SuperSeries is composed of the following subset Series: GSE9640: Transcriptome Profiling of Xanthomonas oryzae pv. oryzae and Xanthomonas oryzae pv. oryzicola on two different medias GSE9643: Transcriptome Profiling of Xanthomonas oryzae pv. oryzae knockout mutants at different hybridization co...
ORGANISM(S): Xanthomonas oryzae pv. oryzae KACC10331 
2010-05-26 | E-GEOD-9658 | biostudies-arrayexpress
TranscriptomicsXanthomonas oryzae pv. oryzae (Indian Isolate): Wild type vs. rpfF mutant
Transcription profiling of the DSF regulon in Xanthomonas oryzae pv. oryzae (Xoo) using wild type and the rpfF mutant. Cell-cell signaling mediated by the quorum sensing molecule known as Diffusible Signaling factor (DSF) is required for virulence of Xanthomonas group of plant pathogens. DSF in diff...
ORGANISM(S): Xanthomonas oryzae pv. oryzae 
2011-04-02 | E-GEOD-27809 | biostudies-arrayexpress
ProteomicsTime-resolved combined analysis of transcriptome and proteome of the pathogenicity-activated plant pathogen Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae (Xoo) is a rice pathogen causing bacterial blight, which outbreaks in most rice cultivating countries and reduces yield up to 50% due to no effective pesticide. Urgent responses of Xoo upon the initial contacts with rice at infection site are essential for pathogenesis....
ORGANISM(S): Xanthomonas oryzae pv. oryzae KACC 10331 
2021-09-09 | PXD020135 | Pride
Transcriptome Time-resolved gene expression Xoo–rice interactions Pathogenicity Proteome Xanthomonas oryzae pv. oryzae 
TranscriptomicsHost transcriptional reprogramming in response to the rice bacterial blight pathogen Xanthomonas oryzae pv.oryzae constitutively expressing the X. oryzae pv. oryzicola TAL2a effector from the high copy vector pKEB31
We performed RNA-Seq of leaves of Oryza sativa L. ssp. japonica cv. Nipponbare 48 hours after inoculation with  Xanthomonas oryzae pv. oryzae strain PXO99A heterologously expressing the Tal2a effector, the designer TAL effector dT280 which targets a sequence overlapping the predicted Tal2a binding s...
ORGANISM(S): Oryza sativa Japonica Group 
2015-05-01 | E-GEOD-67958 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of indica rice cultivar IET8585 (Ajaya) infected with bacterial leaf blight pathogen (Xoo)
An indica rice cultivar IET8585 (Ajaya), resists diverse races of the Xanthomonas oryzae pv oryzae (Xoo) pathogen attack, and is often cultivated as bacterial leaf blight (blb) resistant check in India. Earlier we reported a recessive blb resistance gene mapped to the long arm of chromosome 5 in IET...
ORGANISM(S): Oryza sativa (indica cultivar-group) 
2008-06-14 | E-GEOD-6244 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Density-dependent of Xanthomonas oryzae pv. oryzae PXO99A and PXO99∆ax21
Xanthomonas oryzae pv. oryzae strain PXO99A, so called Xoo, is disable to infect in rice cultivar carrying Xa21 gene. A set of experiments indicated that Ax21 is quorum sensing factor in PXO99 strain. To observe fine-tuned details how Ax21 controls expression of PXO99 in response to change of cell p...
ORGANISM(S): Xanthomonas oryzae pv. oryzae PXO99A 
2012-01-01 | E-GEOD-24989 | biostudies-arrayexpress
GenomicsXanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae Raw sequence reads
PRJNA1094627 | ENA
GenomicsXanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae Raw sequence reads
PRJNA515793 | ENA
GenomicsXanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae Genome sequencing and assembly
PRJNA1124925 | ENA
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