Xi Xun X - OmicsDI

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Genomics (3)
Unknown (3)
Transcriptomics (2)
Metabolomics (1)

Organisms

Homo sapiens (4)
Mus musculus (1)

Repository

biostudies-arrayexpress (5)
MetaboLights (1)

Technology Type

Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2015 (3)
2012 (1)
2007 (1)
2025 (1)

Metabolite Name

(+)-6-aminopenicillanic acid (1)
(+-)12-HETE (1)
(-)-catechin gallate (1)
(1-(5-fluoropentyl)-1h-indazole-3-carbonyl)-l-valine (1)
(1-acetyloxy-3-hydroxy-6,8a-dimethyl-7-oxo-3-propan-2-yl-2,3a,4,8-tetrahydro-1h-azulen-4-yl) 4-hydroxybenzoate (1)
(19r)-9-acetyl-19-hydroxy-10,14-dimethyl-20-oxopentacyclo[11.8.0.0<2,10>.0<4,9 >.0<14,19>]henicos-17-yl acetate (1)
(1e,4e)-1,5-bis(4-methoxyphenyl)penta-1,4-dien-3-one (1)
(2-aminoethoxy)[2-[docosa-4.7.10.13.16.19-hexaenoyloxy]-3-[hexadec-1-en-1-yloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[2-[docosa-4.7.10.13.16.19-hexaenoyloxy]-3-[octadeca-1.9-dien-1-yloxy]propoxy]phosphinic acid (1)
(2-aminoethoxy)[3-[hexadec-1-en-1-yloxy]-2-(hexadecanoyloxy)propoxy]phosphinic acid (1)
(2-aminoethoxy)[3-[hexadec-1-en-1-yloxy]-2-[icosa-5.8.11.14-tetraenoyloxy]propoxy]phosphinic acid (1)
(2e,6e,10e)-13-[(2r)-6-hydroxy-2,8-dimethyl-3,4-dihydrochromen-2-yl]-2,6,10-trimethyltrideca-2,6,10-trienoic acid (1)
(2s,3r,5r,10r,13r,14s,17s)-2,3,14-trihydroxy-10,13-dimethyl-17-[(2r,3r,5r)-2,3,6-trihydroxy-5,6-dimethylheptan-2-yl]-2,3,4,5,9,11,12,15,16,17-decahydro-1h-cyclopenta[a]phenanthren-6-one (1)
(3s,4r)-7-hydroxy-3-[(3s,4r)-7-hydroxy-4-(4-hydroxyphenyl)-2-oxo-5-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydrochromen-3-yl]-4-(4-hydroxyphenyl)-5-[(2s,3r,4s,5s,6r)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-3,4-dihydrochromen-2-one (1)
(4Z,7Z,10Z,13Z,16Z,19Z)-4,7,10,13,1 6,19-Docosahexaenoic acid (1)
(4e,8e)-10-(4-hydroxy-6-methoxy-7-methyl-3-oxo-1h-2-benzofuran-5-yl)-4,8-dimethyldeca-4,8-dienoic acid (1)
(5e)-3,4,9-trihydroxy-2-propyl-2,3,4,7,8,9-hexahydrooxecin-10-one (1)
(9e)-11a-hydroxy-3,6,10-trimethyl-6,7,8,11-tetrahydro-4h-cyclodeca[b]furan-2,5-dione (1)
(S)-2-Hydroxyglutarate (1)
(n-(-2-acetamido))-2-aminoethanesulfonic acid (1)
(r)-butaprost (free acid) (1)
.alpha.-d-galactose 1-phosphate (1)
.beta.-hydroxypropionic acid (1)
.beta.-muricholic acid (1)
.gamma.-glutamyl-(s)-allyl-l-cysteine (1)
1,2-Distearoyl-sn-glycerol 3-phosphate (1)
1,2-dihydro-1,2-naphthalenediol (1)
1,2-dilauroyl-sn-glycero-3-phospho-sn-glycerol (1)
1,2-dimyristoyl-sn-glycero-3-phosphate (1)
1,2-dioleoyl-sn-glycero-3-phosphate (1)

Study type

ChIP-seq (3)
Transcription profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2015 (3)
2012 (1)
2007 (1)
2024 (1)
2022 (1)
2020 (1)

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Transcription profiling of mouse CD45- and CD45+ cells in the embryonic lung

Side population (SP) cells are highly enriched in stem and progenitor cells. CD45+and CD45- SP cells were found at all developmental lung stages with the highest frequency of cells present at embryonic day 17.5 (E17.5), In order to clarify the role of these cells in lung development, we used oligonu...

ORGANISM(S): Mus musculus

2007-11-23 | E-GEOD-2057 | biostudies-arrayexpress

Redefinition of Human Androgen Responsive Elements [FOX_ChIP_exo]

The androgen receptor (AR) mediates the action of androgens by binding to androgen-responsive elements (AREs) and subsequently regulating target genes involved in prostate carcinogenesis. The precise locations, true nature, and functional roles of AREs in human prostate cancer are still unknown. Her...

ORGANISM(S): Homo sapiens

2015-01-01 | E-GEOD-43678 | biostudies-arrayexpress

Redefinition of Human Androgen Responsive Elements [MNase-Seq, ChIP_seq]

ORGANISM(S): Homo sapiens

2015-01-01 | E-GEOD-43720 | biostudies-arrayexpress

Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin hubs

We have analyzed publicly available K562 Hi-C data, which enables genome-wide unbiased capturing of chromatin interactions, using a Mixture Poisson Regression Model to define a highly specific set of interacting genomic regions. We integrated multiple ENCODE Consortium resources with the Hi-C data, ...

ORGANISM(S): Homo sapiens

2012-06-30 | E-GEOD-32213 | biostudies-arrayexpress

Different effects of hydrogen-rich water intake and hydrogen gas inhalation on gut microbiome and plasma metabolites of rats in health status.

Not available

S-EPMC9068821 | biostudies-literature

Ligand-dependent genomic function of glucocorticoid receptor in triple-negative breast cancer

Glucocorticoids (GC) have been widely used as coadjuvants in the treatment of solid tumors, but GC treatment may be associated with poor pharmacotherapeutic response and/or prognosis. The genomic action of GC in these tumors is largely unknown. Here we find that dexamethasone (Dex, a synthetic GC) r...

ORGANISM(S): Homo sapiens

2015-09-18 | E-GEOD-56022 | biostudies-arrayexpress

Multi-kingdom gut microbiota dysbiosis is associated with the development of pulmonary arterial hypertension

Gut microbiota dysbiosis has been implicated in pulmonary arterial hypertension (PAH). However, most studies have focused on the bacterial community and the exact role and mechanisms of multi-kingdom gut microbiota, including bacteria, archaea and fungi in PAH remains largely unclear. Idiopathic ...

2025-05-12 | MTBLS10563 | MetaboLights

Tongxinluo and Functional Outcomes Among Patients With Acute Ischemic Stroke: A Randomized Clinical Trial.

Not available

S-EPMC11428006 | biostudies-literature

Robust estimation of bacterial cell count from optical density.

Not available

S-EPMC7499192 | biostudies-literature