Xia Y Y - OmicsDI

Show results for

Unknown (16080)
Proteomics (289)
Metabolomics (96)
Transcriptomics (87)
Genomics (23)

Organisms

Homo sapiens (171)
Mus musculus (97)
Bombyx mori (16)
Rattus norvegicus (12)
Arabidopsis thaliana (9)
Oryza sativa (9)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (3)
Manihot esculenta (2)
Salmonella enterica subsp. enterica serovar Typhimurium (2)
Sus scrofa (2)
Drosophila melanogaster (2)
Drosophila rhopaloa (1)
Bos grunniens (1)
Methanococcus maripaludis (1)
Musa acuminata (1)
Cordyceps militaris (1)
Metarhizium acridum (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S (1)
Bemisia tabaci (1)
Xenopus tropicalis (1)
Populus euphratica (1)
Listeria monocytogenes (1)
Populus trichocarpa (1)
Setaria italica (1)
Bos taurus (1)
Escherichia coli K-12 (1)
Pseudomonas aeruginosa (1)
Saccharomyces cerevisiae (1)
Escherichia coli str. K-12 substr. MG1655 (1)
108887 (1)

Repository

pride (181)
biostudies-arrayexpress (101)
iProX (100)
MetaboLights (96)
EGA (8)
MassIVE (3)
PeptideAtlas (2)
jPOST (1)
PanoramaPublic (1)
PAXDB (1)
ENA (1)

Tissue

Cell culture (50)
Brain (15)
Epithelial cell (12)
Hepatocyte (7)
Colon (5)
Heart (5)
Kidney (5)
Liver (5)
Lung (5)
Permanent cell line cell (5)
Plant cell (5)
Testis (5)
Blood plasma (4)
Pupal wing (4)
Skin (4)
Bone marrow (3)
Leaf (3)
B cell (2)
Blood (2)
Byssus (2)
Cell suspension culture (2)
Colonic mucosa (2)
Fibroblast (2)
Macrophage (2)
Malignant cell (2)
Saliva (2)
Shoot (2)
Stem cell (2)
Brain (1)
Others (1)

Disease

Disease free (7)
Colon cancer (4)
Breast cancer (3)
Pancreatic ductal adenocarcinoma (3)
Alzheimer's disease (2)
Brain cancer (2)
Brain glioblastoma multiforme (2)
Cervix carcinoma (2)
Liver carcinoma (2)
Lung cancer (2)
Pancreatic carcinoma (2)
Prostate adenocarcinoma (2)
Wounds and Injuries (2)
Acute leukemia (1)
Adult hepatocellular carcinoma (1)
Cardiovascular system disease (1)
Diarrhea (1)
Diffuse gastric cancer (1)
Dilated cardiomyopathy (1)
Duodenal ulcer (1)
Gastric adenocarcinoma (1)
Head and neck squamous cell carcinoma (1)
Hepatitis B (1)
Herpes zoster (1)
Malignant neoplasm of ovary (1)
Melanoma (1)
Myocardial ischemia (1)
Neuropathic pain (1)
Non-small cell lung carcinoma (1)
Prostate carcinoma (1)

Technology Type

Mass Spectrometry (181)
Mass spectrometry (86)
Shotgun proteomics (75)
Bottom-up proteomics (33)
Gel-based experiment (22)
Data-dependent acquisition (20)
Affinity purification coupled with mass spectrometry proteomics (14)
NMR spectroscopy (10)
Data-independent acquisition (10)
Top-down proteomics (8)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Proteogenomics (4)
SWATH MS (3)
DiaPASEF (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
All-ion fragmentation (1)
Immunopeptidomics (1)
MSE (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (39)
Liquid Chromatography MS - negative - reverse phase (30)
Liquid Chromatography MS - alternating - hilic (7)
Liquid Chromatography MS - positive - hilic (7)
Liquid Chromatography MS - alternating - reverse phase (6)
Gas Chromatography MS - positive (5)
Liquid Chromatography MS - negative (5)
Liquid Chromatography MS - negative - hilic (5)
Liquid Chromatography MS - positive (5)
Nuclear Magnetic Resonance (NMR) - (5)
Direct infusion MS - negative (4)
Direct infusion MS - positive (4)
Bruker (3)
Gas Chromatography MS - (3)
Gas Chromatography MS - Positive (GC-MS (Positive)) (3)
Illumina HiSeq 2500 (2)
Illumina HiSeq 2000 (2)
Direct infusion MS - (2)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (2)
Nuclear Magnetic Resonance (NMR) (2)
Ion Torrent PGM (1)
Illumina MiSeq (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Fusion ETD (1)
Q Exactive (1)
5975C Series GC/MSD (Agilent) (1)
6460 Triple Quadrupole LC/MS (Agilent) (1)
6520 Q-TOF LC/MS (Agilent) (1)
6550 Q-TOF LC-MS Agilent (1)
7000C Triple Quadrupole GC/MS (Agilent) (1)

Publication Date

2022 (73)
2023 (63)
2024 (51)
2025 (46)
2021 (43)
2026 (42)
2013 (25)
2014 (20)
2018 (19)
2010 (16)
2011 (15)
2020 (14)
2019 (13)
2012 (12)
2017 (10)
2016 (8)
2015 (8)
2009 (3)
2008 (1)
2007 (1)
2006 (1)
2005 (1)

UNIPROT ID/AC

A1AT_BOMMO (1)
ACH1_BOMMO (1)
B0FPE7_BOMMO (1)
B0ZT34_BOMMO (1)
B9VJ79_BOMMO (1)
BGBP_BOMMO (1)
C0H6R2_BOMMO (1)
C7EPE2_BOMMO (1)
CALR_BOMMO (1)
E5EVW2_BOMMO (1)
E5EVW3_BOMMO (1)
E9JEH5_BOMMO (1)
EF2_BOMMO (1)
FIBH_BOMMO (1)
FIBL_BOMMO (1)
G8GBC4_BOMMO (1)
H9B457_BOMMO (1)
H9IS19_BOMMO (1)
H9IS38_BOMMO (1)
H9ISA2_BOMMO (1)
H9ISA5_BOMMO (1)
H9ISI0_BOMMO (1)
H9ISJ8_BOMMO (1)
H9ISR3_BOMMO (1)
H9ITL0_BOMMO (1)
H9ITR7_BOMMO (1)
H9IU44_BOMMO (1)
H9IUA7_BOMMO (1)
H9IV93_BOMMO (1)
H9IVN9_BOMMO (1)

ENSEMBL ID

ENSG00000170477 (2)
ENSG00000229353 (1)

CHEBI ID

CHEBI:28044 (36)
CHEBI:16708 (31)
CHEBI:30769 (31)
CHEBI:18186 (30)
CHEBI:18237 (29)
CHEBI:27897 (29)
CHEBI:15428 (28)
CHEBI:15741 (27)
CHEBI:16335 (27)
CHEBI:17368 (27)
CHEBI:17822 (27)
CHEBI:28300 (27)
CHEBI:17596 (26)
CHEBI:6650 (26)
CHEBI:16704 (25)
CHEBI:22660 (25)
CHEBI:27266 (25)
CHEBI:15354 (24)
CHEBI:16750 (24)
CHEBI:16811 (24)
CHEBI:18012 (24)
CHEBI:18257 (24)
CHEBI:24898 (24)
CHEBI:25094 (24)
CHEBI:26271 (24)
CHEBI:16449 (23)
CHEBI:25017 (23)
CHEBI:15756 (22)
CHEBI:17568 (22)
CHEBI:17895 (22)

Metabolite Name

Adenine (20)
Adenosine (19)
Glycine (18)
Hypoxanthine (18)
Inosine (18)
Uridine (17)
Choline (16)
Citric acid (16)
Creatine (16)
Creatinine (16)
Phenylalanine (16)
Guanosine (15)
Tryptophan (15)
Tyrosine (15)
Cytidine (14)
L-Tyrosine (14)
Ornithine (14)
Proline (14)
Valine (14)
Xanthine (14)
L-Arginine (13)
Leucine (13)
Threonine (13)
Uric acid (13)
Arachidonic acid (12)
Glutamine (12)
Histidine (12)
Isoleucine (12)
L-Glutamine (12)
L-Proline (12)

First Public Date

2025 (1)

Modification

15.977156 (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)

Study type

Transcription profiling by array (45)
RNA-seq of coding RNA (27)
ChIP-seq (8)
Methylation profiling by high throughput sequencing (6)
RNA-seq of non coding RNA (6)
Unknown experiment type (3)
ChIP-chip by tiling array (2)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
Methylation profiling by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (2488)
2022 (2233)
2023 (1969)
2024 (1922)
2021 (1735)
2020 (1263)
2019 (919)
2018 (737)
2017 (613)
2016 (578)
2015 (378)
2026 (338)
2014 (324)
2013 (200)
2012 (126)
2011 (94)
2010 (90)
2009 (68)
2008 (41)
2006 (22)
2007 (16)
2004 (7)
2005 (5)
2003 (5)
1999 (3)
1998 (3)
2002 (2)
2001 (1)
2000 (1)

Lab affiliation

School of Automation and Intelligent Sensing, Shanghai Jiao Tong University (5)
Biological Science Research Center, Southwest University, Chongqing, 400715, China (3)
Central South University (3)
Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
The Second Hospital of Dalian Medical University (3)
Zhejiang University (3)
CAS Key Laboratory of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China. (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
Department of Radiation and Medical Oncology, Zhongnan Hospital of Wuhan University (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
National Institutes of Health (NIH) National Center for Advancing Translational Sciences (NCATS) (2)
National Key Laboratory of Medical Molecular Biology & Department of Immunology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences, 5 Dong Dan San Tiao, Dongcheng District, Beijing 100005, China. (2)
Northeast Normal University (2)
Ruijin Hospital, Shanghai Jiao Tong University School of Medicine (2)
Shenzhen People’s Hospital (2)
State Key Laboratory of Oncology in South China (2)
State Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (2)
Tianjin Medical University Cancer Institute and Hospital (2)
Tongji University (2)
1 Department of Hepatobiliary & Pancreatic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, PR China. 2 Clinical Medicine Research Center for Minimally Invasive Procedure of Hepatobiliary & Pancreatic Diseases of Hubei Province, Hubei, PR China. 3 Taikang Center for Life and Medical Sciences of Wuhan University (1)
1Department of Hepatobiliary & Pancreatic Surgery, Zhongnan Hospital of Wuhan University, Wuhan, 430071, PR China. 2Clinical Medicine Research Center for Minimally Invasive Procedure of Hepatobiliary & Pancreatic Diseases of Hubei Province, Hubei, PR China. 3Taikang Center for Life and Medical Sciences of Wuhan University (1)
1Department of Pathophysiology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine (SJTU-SM), Shanghai 200025, China. 2Institute of Health Sciences, Shanghai Institutes for Biological Sciences of Chinese Academy of Sciences and SJTU-SM, Shanghai 200025, China. (1)
Affiliated Hospital of Nanjing University of Chinese Medicine (1)
Affiliated Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
Assistant Professor, Department of Chemistry Assistant Professor, Department of Biology (by courtesy) Assistant Professor, Thomas C. Jenkins Department of Biophysics (by courtesy) Preceptor, Chemistry-Biology Interface (CBI) Program (1)
Assistant Professor, Department of Chemistry Assistant Professor, Thomas C. Jenkins Department of Biophysics (by courtesy) (1)
Basic Medicine, Guangxi University of Chinese Medicine, Nanning, China (1)
Beijing Hospital (1)
Biological Science Research Center, Southwest University, Chongqing, 400715, China. (1)
Breast Tumor Center Sun Yat-Sen Memorial Hospital Sun Yat-Sen University 107 Yanjiang West Road Guangzhou 510120, P.R.China (1)