Xiang K K - OmicsDI

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Unknown (2436)
Transcriptomics (87)
Proteomics (87)
Genomics (48)
Metabolomics (19)
Multiomics (1)

Organisms

Homo sapiens (120)
Mus musculus (43)
Rattus norvegicus (9)
Thermococcus eurythermalis (4)
Macaca mulatta (3)
Haloferax mediterranei (2)
Camponotus floridanus (2)
Lateolabrax japonicus (2)
Bombyx mori (2)
298176 (2)
Larimichthys crocea (1)
Brucella melitensis (1)
Sedum alfredii (1)
Brassica napus (1)
Heterocephalus glaber (1)
Oryza sativa Japonica Group (1)
Gallus gallus (1)
Adeno-Associated Virus PREDICT_AaV-6 (1)
Aeromonas hydrophila HS01 (1)
Escherichia coli (1)
Human parechovirus strain T82-0169 (1)
Lactuca sativa (1)
Mus (1)
Oryza sativa (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
Triticum aestivum/Septoria tritici mixed cDNA library (1)
Acanthaster planci (1)
Arabidopsis thaliana (1)
Bos taurus (1)
Caenorhabditis elegans (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (98)
pride (46)
EGA (38)
iProX (31)
MetaboLights (18)
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Tissue

Cell culture (4)
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HCT-116 cell (1)
Heart (1)
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Thyroid gland (1)

Disease

Cervix carcinoma (2)
Adenocarcinoma (1)
Acute T cell leukemia (1)
Atherosclerosis (1)
Breast cancer (1)
Severe acute respiratory syndrome (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (46)
Shotgun proteomics (26)
Mass spectrometry (16)
Bottom-up proteomics (7)
Data-dependent acquisition (7)
Illumina HiSeq 2000 (6)
Affinity purification coupled with mass spectrometry proteomics (4)
Proteogenomics (2)
Affymetrix_U133v2, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
DiaPASEF (1)
Gel-based experiment (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (8)
Liquid Chromatography MS - negative - reverse phase (7)
Affymetrix GeneChip Scanner 3000 7G (4)
Q Exactive Plus (3)
Liquid Chromatography MS - negative (3)
Q Exactive (2)
SYNAPT G2-Si (2)
TSQ Altis (2)
Xevo G2 XS Tof (2)
Xevo G2-XS QTof (2)
TripleTOF 5600 (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Liquid Chromatography MS - positive (2)
Liquid Chromatography MS - positive - hilic (2)
Agilent G2565BA Microarray Scanner System (Agilent Technologies, Santa Clara, CA) (1)
Tecan HS4800 hybridization station (Tecan, Vienna, Austria) (1)
GenePix 4000B [Axon Instruments] (1)
NextSeq 2000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
6550 iFunnel Q-TOF LC/MS (1)
LTQ Orbitrap (1)
Q Exactive HF (1)
TripleTOF 6600 (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Nuclear Magnetic Resonance (NMR) - (1)

Publication Date

2025 (19)
2020 (17)
2014 (17)
2012 (17)
2023 (16)
2021 (14)
2015 (14)
2022 (14)
2010 (12)
2024 (11)
2013 (10)
2011 (10)
2026 (10)
2018 (5)
2016 (5)
2008 (4)
2019 (3)
2007 (3)
2017 (3)

CHEBI ID

CHEBI:15354 (6)
CHEBI:16040 (6)
CHEBI:30769 (6)
CHEBI:15756 (5)
CHEBI:15891 (5)
CHEBI:16335 (5)
CHEBI:16704 (5)
CHEBI:17154 (5)
CHEBI:17351 (5)
CHEBI:17368 (5)
CHEBI:17568 (5)
CHEBI:17597 (5)
CHEBI:17895 (5)
CHEBI:18183 (5)
CHEBI:20067 (5)
CHEBI:30805 (5)
CHEBI:116314 (4)
CHEBI:15956 (4)
CHEBI:16347 (4)
CHEBI:16359 (4)
CHEBI:16919 (4)
CHEBI:17053 (4)
CHEBI:17521 (4)
CHEBI:17596 (4)
CHEBI:17748 (4)
CHEBI:18132 (4)
CHEBI:18295 (4)
CHEBI:27432 (4)
CHEBI:28281 (4)
CHEBI:28834 (4)

Metabolite Name

Hypoxanthine (6)
Uracil (6)
Adenosine (5)
Choline (5)
Cytosine (5)
Inosine (5)
Uridine (5)
Acetylcholine (4)
Adenine (4)
Agmatine (4)
Azelaic acid (4)
Creatine (4)
Creatinine (4)
Guanine (4)
Indole (4)
Methyl jasmonate (4)
Nicotinamide (4)
3-Hydroxybutyric acid (3)
4-Hydroxybenzaldehyde (3)
Adipic acid (3)
Betaine (3)
Betulin (3)
Biotin (3)
Cafestol (3)
Caffeic acid (3)
Caffeine (3)
Cuminaldehyde (3)
Cytidine (3)
Dehydrocholic acid (3)
Deoxycholic acid (3)

First Public Date

2014 (1)

Study type

Transcription profiling by array (46)
RNA-seq of coding RNA (24)
Other (6)
ChIP-seq (6)
Unknown experiment type (2)
Animal - One-color microarray (2)
Comparative genomic hybridization by array (2)
Methylation profiling by high throughput sequencing (2)
Cell line - One-color microarray (1)
Transcription profiling by RT-PCR (1)
Hi-C (1)
MicroRNA profiling by array (1)
DNA-seq (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (378)
2024 (323)
2022 (300)
2023 (291)
2021 (241)
2020 (230)
2019 (140)
2018 (116)
2017 (77)
2015 (69)
2016 (68)
2014 (59)
2026 (53)
2012 (51)
2013 (42)
2011 (38)
2010 (23)
2009 (12)
2008 (9)
2007 (6)
2005 (3)
2006 (2)
2004 (2)
1998 (1)

Lab affiliation

Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (4)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Center for Stem Cell Biology and Tissue Engineering, Key Laboratory for Stem Cells and Tissue Engineering, Ministry of Education, Sun Yat-sen University, Guangzhou, Guangdong, China. (2)
College of Chemistry and Chemical Engineering, Hubei University, Wuhan, 430062, Hubei, P. R. China. (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 Neuchatel, Switzerland (2)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃƒÂ¢tel, Switzerland (part of Philip Morris International group of companies) (2)
Whitehead Institute and MIT (2)
COld Spring Harbor Laboratory (1)
Centre for Genetics, Ecology and Physiology, Faculty of Science, Health, Education and Engineering, University of the Sunshine Coast, Australia. (1)
Changchun Veterinary Research Institute (1)
China agricultural university, preventive veterinary medicine (1)
Dalian Institute of Chemical and Physics, Chinese Academy of Sciences (1)
Department of Biomedical Sciences, University of Copenhagen, Denmark (1)
Department of Clinical Laboratory, The Affiliated Wuxi Matemity and Child Health Care Hospital of Nanjing Medical University (1)
Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Boston, Massachusetts 02115, United States. Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, United States. (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Institute of Molecular Systems Biology, ETH Zürich, Switzerland (1)
Institute of Oceanology, Chinese Academy of Sciences, 164 West Xingang Road, Guangzhou 510301, China. (1)
MOE Key Laboratory of Tumor Molecular Biology and Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University, Guangzhou 510632, China. (1)
Massachusetts Institute of Technology (1)
Philip Morris International R&D, Philip Morris Products S.A., Quai Jeanrenaud 5, 2000 NeuchÃ¢tel, Switzerland (part of Philip Morris International group of companies) (1)
Plant Physiology Group, Westfälische Wilhelms-Universität Münster, Germany (1)
Professor of Cancer Research Professor of Pharmacology and Cancer Biology Professor of Cell Biology Duke University, School of Medicine (1)
School of Biological Sciences, Victoria University of Wellington, Wellington, New Zealand (1)
School of Chemical Science & Engineering and Shanghai Key Laboratory of Chemical Assessment and Sustainability, Tongji University, Shanghai 200092, China (1)
State Key Laboratory of Developmental Biology of Freshwater Fish, College of Life Science, Hunan Normal University, Changsha, 410081, P. R. China. (1)
State Key Laboratory of Membrane Biology, Institute of Zoology, Chinese Academy of Sciences (1)
State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou, China (1)
State Key Laboratory of Veterinary Etiological Biology, Key Laboratory of Veterinary Parasitology of Gansu Province, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, Gansu Province 730046, PR China (1)

Tags

xref:PubMed:25030175 (1)

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Identification of BolA protein reveals a novel virulence factor in Klebsiella pneumoniae that contributes to liver abscess in mice

BolA has been characterized as an important transcriptional regulator, which is induced in the stationary phase of growth and is often associated with bacterial virulence. This study was initiated to elucidate the role of the BolA in the virulence of K. pneumoniae. Using a mous...

2022-09-13 | MTBLS2712 | MetaboLights

Mass spectrometry analysis of post-translational modifications of K/C-III-expressing HEK293T cells treated by A485 for 6 and 12 hours

To determine whether CBP/P300 HAT activity is essential for leukemia cell maintenance, we utilized the selective acetyltransferase inhibitor A485. Mass spectrometry analysis of post-translational modifications showed that A485 treatment of K/C-III-expressing HEK293T cells for 6 and 12 hours signific...

ORGANISM(S): Homo sapiens (Human)

2025-08-08 | PXD061565 | Pride