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TranscriptomicsGenome-wide transcriptome analysis of gametophyte development in Physcomitrella patens
Gene expression was analyzed with digital gene expression tag profiling (DGEP) with samples taken from P. patens protonema at 3, 14 and 24 days, and also from or leafy shoot tissues l at 30 days after protoplastes isolated, and from 14-day-old caulonemal and chloronemal tissues. Totally, 4333 genes ...
ORGANISM(S): Physcomitrella patens 
2011-12-20 | E-GEOD-33279 | biostudies-arrayexpress
MetabolomicsTranscriptomic and metabolomic analysis of liver cirrhosis
Liver cirrhosis is one of the leading causes of decreased life expectancy worldwide. However, the molecular mechanisms underlying the development of liver cirrhosis remain unclear. In this study, we performed a comprehensive analysis using transcriptome and metabolome sequencing to explore the genes...
2024-08-07 | MTBLS5665 | MetaboLights
TranscriptomicsTranscriptome of Protoplasts Reprogrammed into Stem Cells in Physcomitrella patens
We obtained genome-wide digital gene expression tag profiles within the first three days of P. patens protoplast reprogramming. At four time-points during protoplast reprogramming, the transcript levels of 4827 genes changed more than four-fold and their expression correlated with the reprogramming ...
ORGANISM(S): Physcomitrella patens 
2015-02-28 | E-GEOD-36117 | biostudies-arrayexpress
ProteomicsCDK5RAP3, a UFL1 substrate adaptor, is critical for liver development
Protein modification by ubiquitin and ubiquitin-like proteins (UBLs) regulates numerous biological functions. The UFM1 system, a novel UBL conjugation system, is implicated in mouse development and hematopoiesis. However, its broad biological functions and working mechanisms remain largely elusive. ...
ORGANISM(S): Mus Musculus 
2019-01-14 | PXD012340 |
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