Xie K K - OmicsDI

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Organisms

Escherichia coli str. K-12 substr. MG1655 (1)
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CHEBI ID

CHEBI:1 (1)
CHEBI:10059 (1)
CHEBI:10066 (1)
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Metabolite Name

Hypoxanthine (11)
Guanine (9)
Guanosine (9)
Inosine (9)
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Creatine (7)
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5'-Methylthioadenosine (6)
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Azelaic acid (6)
Betaine (6)
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L-Citrulline (6)
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AMP (5)
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IsPrivate

False (1)

First Public Date

2014 (1)
2013 (1)

Classification

bacteria (1)

Modelling Approach

Constraint-based model (1)

Modification

15.994915 (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
57.021464 (1)

Study type

Transcription profiling by array (58)
RNA-seq of coding RNA (26)
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RNA-seq of non coding RNA (4)
Unknown experiment type (3)
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Animal - High-throughput sequencing (1)
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Release Date

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2002 (3)
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2000 (1)

Lab affiliation

Medical Basic Research Innovation Center for Cardiovascular and Cerebrovascular Diseases, Ministry of Education, Nanjing Medical University, Nanjing, Jiangsu, China (3)
Dept. of Laboratory Medicine University of California, San Francisco, USA (2)
School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China ( lab head ) (2)
South China Agricultural University (2)
St Jude Children's Research Hospital (2)
State Key Laboratory of Oncology in South China (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
Tianjin Medical University General Hospital (2)
westlake.edu.cn (2)
, Dana-Farber Cancer Institute, Harvard Medical School 360 Longwood Avenue Longwood Center, LC4117 Boston, MA 02215 (1)
1Department of Pathology, Dana-Farber/Harvard Cancer Center, PhD Program in Immunology, Harvard Medical School; Department of Laboratory Medicine, Boston Children's Hospital, Enders Research Building, Room 811, Boston, MA, 02115, USA (1)
Associate Member Developmental Neurobiology St. Jude Children's Research Hospital (1)
BGI-Shenzhen (1)
Cardiovascular department, Yale University (1)
Carnegie Mass Spectrometry Facility (1)
Center for Infectious Diseases Research Department of Pathology and Genomic Medicine Houston Methodist Research Institute USA (1)
Center for RNA Biology: From Genome to Therapeutics Department of Biochemistry and Biophysics University of Rochester Medical Center Rochester, NY, 14642, USA (1)
Cold Spring Harbor Laboratory (1)
College of Horticulture, Vegetable Genetics and Breeding Laboratory, Anhui Agricultural University, 130 West Changjiang Road, 230036 Hefei, Anhui, China; (1)
College of Life Sciences, Nanjing Agricultural University, Nanjing, 210095, China (1)
Department of Anesthesiology, Obstetrics & Gynecology Hospital of Fudan University (1)
Department of Biology, Stanford University (1)
Department of Biosciences & Medical Biology, Paris Lodron University of Salzburg, Austria. (1)
Department of Cell Biology and Molecular Medicine, Rutgers New Jersey Medical School, Rutgers Biomedical and Health Sciences (1)
Department of Chemistry and Biochemistry, Brigham Young University, Provo, UT, 84602 (1)
Department of Chemistry, City University of Hong Kong, 83 Tat Chee Avenue, Kowloon, Hong Kong, P. R. China Key Laboratory of Biochip Technology, Biotech and Health Centre, City University of Hong Kong, Shenzhen Research Institute, Shenzhen 518057, China (1)
Department of Immunology, University of Pittsburgh (1)
Department of Integration of Chinese and Western Medicine, School of Basic Medical Sciences, Peking University, 38 Xueyuan Road, Beijing 100191, People’s Republic of China (1)
Department of Microbiology and Immunology, Stanford University (1)
Department of Microbiology-Immunology, University of North Carolina at Chapel Hill, NC, (1)

Tags

xref:PubMed:22232676 (1)
xref:PubMed:17913887 (1)
pathogen:bacterium (1)
pathogen (1)

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Identification of BolA protein reveals a novel virulence factor in Klebsiella pneumoniae that contributes to liver abscess in mice

BolA has been characterized as an important transcriptional regulator, which is induced in the stationary phase of growth and is often associated with bacterial virulence. This study was initiated to elucidate the role of the BolA in the virulence of K. pneumoniae. Using a mous...

2022-09-13 | MTBLS2712 | MetaboLights

pNaKtide Inhibits Na/K-ATPase Signaling and Attenuates Obesity.

Not available

S-EPMC10812088 | biostudies-literature

Expression profiling of murine lung 70 days following exposure to fractionated or acute dose of 1.0 Gy 56Fe- particle irradiation

Irradiation of the K-rasLA1 mouse model with a fractionated dose of 1.0Gy 56Fe- particles increases the incidence of invasive carcinoma compared to unirradiated controls or those irradiated with an acute dose. Microarray profiling was perfromed on whole lungs from K-rasLA1 mice in order to determin...

ORGANISM(S): Mus musculus

2014-09-22 | E-GEOD-42233 | biostudies-arrayexpress

A host potassiophilicity strategy for unprecedentedly stable and safe K metal batteries.

Not available

S-EPMC10466283 | biostudies-literature

Protein Carbonylation of an Amino Acid Residue of the Na/K-ATPase α1 Subunit Determines Na/K-ATPase Signaling and Sodium Transport in Renal Proximal Tubular Cells.

Not available

S-EPMC5079028 | biostudies-literature

Multiple High-Affinity K+ Transporters and ABC Transporters Involved in K+ Uptake/Transport in the Potassium-Hyperaccumulator Plant Phytolacca acinosa Roxb.

Not available

S-EPMC7238005 | biostudies-literature

Regulation of caveolin-1 membrane trafficking by the Na/K-ATPase.