Xu Chang C - OmicsDI

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Unknown (1568)
Proteomics (70)
Transcriptomics (23)
Genomics (22)
Metabolomics (10)
Multiomics (6)
Models (1)

Organisms

Homo sapiens (58)
Andropogon gerardi (29)
Bacteria (29)
Canis lupus familiaris (29)
Clostridium perfringens (29)
Cnidaria (29)
Cricetulus griseus (29)
Eukaryota (29)
Fasciola (29)
Hepatitis B virus (29)
Human betaherpesvirus 5 (29)
Madurella mycetomatis (29)
Mesocricetus auratus (29)
Miscanthus x giganteus (29)
Mus musculus (29)
Mycobacterium tuberculosis (29)
Orthoflavivirus (29)
Panicum virgatum (29)
Platyhelminthes (29)
Pseudomonas aeruginosa AES-1R (29)
Rattus norvegicus (29)
Mus musculus (12)
Gallus gallus (2)
Mycolicibacterium smegmatis MC2 155 (2)
Bradyrhizobium diazoefficiens USDA 110 (1)
Zea mays (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Gossypium hirsutum (1)
Mus (1)
Saccharomyces cerevisiae (1)

Repository

iProX (31)
pride (29)
biostudies-arrayexpress (24)
EGA (21)
MetaboLights (10)
MassIVE (7)
PeptideAtlas (3)
BioModels (1)

Tissue

Liver (6)
Lung (6)
Testis (5)
Cell culture (4)
Spleen (4)
Others (3)
Blood plasma (3)
Kidney (3)
Permanent cell line cell (3)
Brain (2)
Heart (2)
Pancreas (2)
Small intestine (2)
Blood cell (1)
Bone marrow (1)
Cell suspension culture (1)
Cerebrospinal fluid (1)
Colon (1)
Cotyledon (1)
Dendritic cell (1)
Diploid cell (1)
Embryo (1)
Endosperm (1)
Epithelial cell (1)
Erythrocyte (1)
Fibroblast (1)
HEK-293 cell (1)
Hair follicle dermal papilla cell (1)
Haploid cell (1)
Head and neck squamous cell carcinoma cell (1)

Disease

Lung adenocarcinoma (2)
Alopecia (1)
Cardiovascular system disease (1)
Disease free (1)
Lung small cell carcinoma (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (29)
Shotgun proteomics (17)
Mass spectrometry (10)
Bottom-up proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (3)
Gel-based experiment (3)
Data-dependent acquisition (2)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Mass spectrometry imaging (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
MS:1000031 (3)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap Elite (2)
LTQ Orbitrap Velos (1)
Orbitrap Exploris 480 (1)
Q Exactive (1)
Q Exactive HF-X (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - negative - hilic (1)
QExactive (1)

Publication Date

2022 (12)
2014 (11)
2023 (10)
2020 (9)
2019 (9)
2013 (7)
2021 (6)
2018 (6)
2024 (4)
2016 (4)
2011 (4)
2015 (3)
2026 (3)
2010 (2)
2025 (2)
2017 (2)
2012 (1)
2008 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
Q8K4S1 (1)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:17568 (6)
CHEBI:17509 (6)
CHEBI:27468 (5)
CHEBI:16196 (5)
CHEBI:7916 (5)
CHEBI:17750 (5)
CHEBI:18183 (5)
CHEBI:132983 (5)
CHEBI:16704 (5)
CHEBI:34900 (5)
CHEBI:17596 (5)
CHEBI:28865 (5)
CHEBI:28716 (5)
CHEBI:71464 (4)
CHEBI:30805 (4)
CHEBI:16552 (4)
CHEBI:46961 (4)
CHEBI:16755 (4)
CHEBI:16927 (4)
CHEBI:49033 (4)
CHEBI:22652 (4)
CHEBI:16708 (4)
CHEBI:17311 (4)
CHEBI:16750 (4)
CHEBI:28874 (1)
CHEBI:30212 (1)
CHEBI:26034 (1)
CHEBI:16595 (1)
CHEBI:18035 (1)
CHEBI:18348 (1)

Metabolite Name

Inosine (5)
Uracil (4)
3-Hydroxycapric acid (4)
Kynurenic acid (3)
Methyl jasmonate (3)
Palmitoleic acid (3)
N-Formylmethionine (3)
Adenosine (3)
Azelaic acid (3)
Adenine (3)
Uric acid (3)
Xanthine (3)
Guanosine (3)
Uridine (3)
Caffeine (3)
Hypoxanthine (3)
Enterostatin (2)
Goyazensolide (2)
(S)-Hydroxydecanoyl-CoA (2)
PC(O-18:0/22:0) (2)
Flecainide (2)
2-[3-Carboxy-3-(methylammonio)propyl]-L-histidine (2)
Pyrrole-2-carboxylate (2)
Nelfinavir (2)
Quercetin (2)
Alpha-CEHC (2)
Acarbose (2)
3-Hydroxymandelic acid (2)
3-Hydroxymethylglutaric acid (2)
L-Aspartate (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Modification

2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)

Study type

Transcription profiling by array (15)
RNA-seq of coding RNA (4)
Transcription profiling by RT-PCR (2)
Comparative genomic hybridization by array (1)
ChIP-seq (1)
Methylation profiling by array (1)

Release Date

2025 (221)
2022 (191)
2023 (189)
2021 (175)
2024 (157)
2020 (123)
2019 (90)
2018 (84)
2016 (67)
2015 (67)
2017 (59)
2014 (46)
2026 (30)
2013 (24)
2012 (17)
2011 (17)
2010 (11)
2008 (6)
2009 (6)
2007 (4)
2004 (4)
2005 (3)
2002 (1)

Lab affiliation

Beijing proteome research center (3)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， Beijing 102206 P.R. China. (1)
Beijing proteome research center, Beijing, China (1)
Central South University of Forestry and Technology (1)
Chinese Academy of Fishery Sciences (1)
Collage of pharmaceutical science,Soochow University,Jiangsu Province,China (1)
Department of Cellular and Molecular Pharmacology, University of California San Francisco, USA (1)
Department of Chemistry, The University of Hong Kong (1)
Department of Plant Biology, Carnegie Institution for Science, Stanford, California, USA (1)
Department of Thoracic Surgery, The Second Affiliated Hospital of Harbin Medical University, China (1)
Department of Thoracic Surgery, The Second Affiliated Hospital of Harbin Medical University, Harbin 150086, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Harold C. Simmons Comprehensive Cancer Center, UT Southwestern Medical Center, Dallas, TX, USA (1)
Kunming Institute of Zoology, Chinese Academy of Sciences (1)
Laboratory of Cell and Developmental Signaling, National Cancer Institute, National Institutes of Health, Frederick, MD 21702, USA (1)
Metabolomics-Proteomics Research Center, National Yang Ming Chiao Tung University, Taipei 11221, Taiwan (1)
Molecular Cardiology Laboratory, the First Affiliated Hospital of Shantou University Medical College, China. (1)
National Center For Protein Sciences · Beijing (1)
Pfizer, INC. (1)
State Key Laboratory Cultivation Base for Cell Differentiation Regulation, Henan Normal University, Xinxiang, Henan Province, China (1)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing), Beijing Institute of Lifeomics, Beijing 102206, China. (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center (1)
State Key Laboratory of Proteomics; Beijing Proteome Research Center; National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics; China (1)
The Institute of Cancer Research (1)
Translational Biomedical Proteomics, Institute of Molecular and Cell Biology (IMCB), Singapore (1)

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Factors Associated with Large Renal Function Decline in Patients with Chronic Hepatitis C Successfully Treated with Direct-Acting Antiviral Therapy.

Not available

S-EPMC9914858 | biostudies-literature

Metabolome and transcriptome integration reveals insights into petals coloration mechanism of three species in Sect. Chrysantha chang.

Not available

S-EPMC11034495 | biostudies-literature

Tri-KIX +/- c-Myb MEFs

Transcription profiling by array of wild type and p300 KIX/KIX; CBP +/KIX primary mouse embryonic fibroblasts (MEFs) transduced with either MSCV-c-Myb_IRES-GFP or MSCV-IRES-GFP retrovirus to determine the effect of mutating the KIX domain of CBP and p300 on c-Myb regulated gene expression. CBP KIX ...

ORGANISM(S): Mus musculus

2014-02-10 | E-MTAB-1973 | biostudies-arrayexpress

The subfamily Xerocomoideae (Boletaceae, Boletales) in China.

Not available

S-EPMC10825750 | biostudies-literature

Real-world efficacy and safety of pangenotypic direct-acting antivirals against hepatitis C virus infection in Taiwan.

Not available

S-EPMC8241842 | biostudies-literature

Xu2003 - Phosphoinositide turnover

Xu2003 - Phosphoinositide turnover The model reproduces the percentage change of PIP_PM, PIP2_PM and IP3_Cyt as depicted in Figure 1 of the paper. The model also contains the equations for the analysis of PH-GFP experiments, however the initial value of PH_GFP has been set to zer...

2024-09-02 | BIOMD0000000075 | BioModels

Polymorphisms of glutathione S-transferase genes and survival of resected hepatocellular carcinoma patients.

Not available

S-EPMC4394094 | biostudies-literature

Identification of Missing Proteins in the Phosphoproteome of Kidney Cancer

Finding missing proteins (MPs) has been one of the critical missions of Chromosome-Centric Human Proteome Project (C-HPP) since 2012, twenty-five research teams from seventeen countries have been trying to search adequate and accurate evidence for MPs through various biochemical strategies. In our p...

ORGANISM(S): Homo sapiens (Human)

2017-09-01 | PXD006482 | Pride

Qin-Yu-Qing-Chang decoction reshapes colonic metabolism by activating PPAR-γ signaling to inhibit facultative anaerobes against DSS-induced colitis.

Not available

S-EPMC11425999 | biostudies-literature

Comprehensive analysis of lncRNA-miRNA-mRNA during proliferative phase of rat liver regeneration.

Not available

S-EPMC6617821 | biostudies-literature

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1694 Results

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