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TranscriptomicsExpression data from mouse bone marrow-derived macrophages (BMDMs)
To recruit phagocytes, apoptotic cells characteristically release ATP, which functions as a “danger” signal. Here, we found that the culture supernatant of apoptotic cells activated the macrophages to express anti-inflammatory genes such as NR4A and Thbs1. A high level of AMP accumulated in the apop...
ORGANISM(S): Mus musculus 
2014-06-24 | E-GEOD-50883 | biostudies-arrayexpress
TranscriptomicsSoybean Flooding
Transcriptional profiling of roots and hypocotyls of soybean comparing control untreated 2-d-old seedlings with flooding treated 2-d-old seedlings.
ORGANISM(S): Glycine max 
2011-09-02 | E-MEXP-2967 | biostudies-arrayexpress
UnknownIntegrative and theoretical research on the architecture of a biological system and its disorder.
Not available
S-EPMC6456489 | biostudies-literature
ProteomicsTK03_Proteome_Soybean
Proteomic analysis of the effect of plant-derived smoke on soybean during recovery after flooding stress
ORGANISM(S): Glycine Max 
2018-06-13 | PXD008603 | JPOST Repository
MetabolomicsNiacin restriction with NAMPT-inhibition is synthetic lethal to neuroendocrine carcinoma (Cell NAMPTi treatment)

NAMPT plays a major role in NAD biosynthesis in many cancers and is an attractive potential cancer target. However, factors dictating therapeutic efficacy of NAMPT inhibitors (NAMPTi) are unclear. We report that neuroendocrine phenotypes predict lung and prostate carcinoma vulnerability to NAMPTi...

2023-10-10 | MTBLS7251 | MetaboLights
TranscriptomicsThe search of genetic resources for parthenocarpic pears and comparison of gene expression between high and low parthenocarpy cultivars
Parthenocarpy—the production of seedless fruits without fertilization—is very useful for fruit cultivation. Among pear cultivars (Japanese, Chinese, and European pears and their interspecific hybrids) subjected to flower emasculation and left unpollinated, only some of the European pears had a stabl...
ORGANISM(S): Pyrus hybrid cultivar 
2012-01-10 | E-GEOD-27090 | biostudies-arrayexpress
TranscriptomicsSite-specific heterogeneity of melanocytes in human skin
Little is known about the mechanisms underlying the localization of human melanocytes during embryogenesis, and how the characteristics of melanocytes differ in various body sites. Immunohistochemical studies of biopsy tissue obtained from four different anatomic sites (scalp, back, abdomen, and sol...
ORGANISM(S): Homo sapiens 
2011-04-30 | E-GEOD-24041 | biostudies-arrayexpress
UnknownProtocol for a multicentre, prospective observational study of elective neck dissection for clinically node-negative oral tongue squamous cell carcinoma (END-TC study).
Not available
S-EPMC9472110 | biostudies-literature
TranscriptomicsPromoter proximal pausing and its regulation by c-Myc in embryonic stem cells
This SuperSeries is composed of the following subset Series: GSE20529: Promoter proximal pausing and its regulation by c-Myc in embryonic stem cells: ChIP-chip GSE20530: Promoter proximal pausing and its regulation by c-Myc in embryonic stem cells: ChIP-Seq Refer to individual Series
ORGANISM(S): Mus musculus 
2010-04-14 | E-GEOD-20485 | biostudies-arrayexpress
TranscriptomicsPromoter proximal pausing and its regulation by c-Myc in embryonic stem cells: ChIP-chip
Recruitment of the RNA Polymerase II (Pol II) transcription initiation apparatus to promoters by specific DNA binding transcription factors is well recognized as a key regulatory step in gene expression. We describe here evidence that promoter-proximal pausing is a general feature of transcription ...
ORGANISM(S): Mus musculus 
2010-04-02 | E-GEOD-20529 | biostudies-arrayexpress
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