Yang Tong T - OmicsDI

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Unknown (2532)
Proteomics (92)
Transcriptomics (12)
Metabolomics (11)
Multiomics (6)
Genomics (5)
Other (1)

Organisms

Homo sapiens (49)
Allexis (30)
Arabidopsis thaliana (30)
Callinectes sapidus (30)
Cyanophora paradoxa (30)
Ensifer adhaerens (30)
Entamoeba histolytica (30)
Escherichia coli (30)
Histomonas meleagridis (30)
Leishmania major strain Friedlin (30)
Listeria monocytogenes (30)
Medicago truncatula (30)
Methylohalobius crimeensis 10Ki (30)
Mus musculus (30)
Mycobacterium tuberculosis (30)
Oryza sativa Indica Group (30)
Ostreococcus tauri (30)
Physcomitrium patens (30)
Pseudomonas putida KT2440 (30)
Rattus norvegicus (30)
Saccharomyces cerevisiae (30)
Mus musculus (12)
Yersinia pestis CO92 (9)
Severe acute respiratory syndrome coronavirus 2 (2)
Yersinia pestis (1)
Oryza sativa (1)
Bos taurus (1)
Caenorhabditis elegans (1)
Helicobacter pylori G27 (1)
Mycolicibacterium smegmatis MC2 51 (1)

Repository

iProX (39)
pride (30)
PeptideAtlas (14)
biostudies-arrayexpress (13)
MetaboLights (11)
MassIVE (7)
EGA (4)
jPOST (2)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (6)
Others (3)
Lung (3)
Blood serum (2)
Liver (2)
Stem cell (2)
Testis (2)
B cell (1)
Blood (1)
Blood cell (1)
Blood plasma (1)
Cell suspension culture (1)
Early embryonic cell (1)
Embryonic stem cell (1)
Epididymal white adipose tissue (1)
Epithelial cell (1)
Erythrocyte (1)
Esophagus (1)
HeLa cell (1)
Heart (1)
Hepatocyte (1)
Inner ear (1)
Leaf (1)
Lymph node (1)
Mesenchymal cell (1)
Monocyte (1)
Urine (1)

Disease

Acute leukemia (2)
Disease free (2)
Not Available (1)
Acute kidney failure (1)
Breast cancer (1)
Hepatocellular carcinoma (1)
Kidney disease (1)
Severe acute respiratory syndrome (1)

Technology Type

Mass Spectrometry (30)
Shotgun proteomics (19)
Mass spectrometry (8)
Data-dependent acquisition (4)
Top-down proteomics (4)
Mass spectrometry assay (3)
Bottom-up proteomics (2)
Illumina HiSeq 2000 (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)

Instrument Platform

TripleTOF 5600 (12)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - positive - reverse phase (4)
Liquid Chromatography MS - negative - reverse phase (4)
MS:1000031 (3)
Liquid Chromatography MS - negative - hilic (3)
Q Exactive HF-X (2)
6540 Q-TOF LC/MS (Agilent) (2)
LTQ Orbitrap Elite (2)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 4000 (1)
Instrument (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Exploris 480 (1)
Q Exactive Plus (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
QExactive (1)

Publication Date

2024 (14)
2022 (14)
2015 (13)
2023 (13)
2025 (12)
2026 (10)
2020 (10)
2016 (9)
2014 (6)
2021 (5)
2019 (4)
2013 (2)
2011 (2)
2008 (1)
2006 (1)

UNIPROT ID/AC

A0A024RC46 (14)
B3KML9 (14)
B3KT93 (14)
B4DRV9 (14)
B4E3A4 (14)
E9PB61 (14)
G5E972 (14)
G8JLB6 (14)
H0YAR2 (14)
H0YJH7 (14)
I3L4N8 (14)
J9JID7 (14)
O00148 (14)
O00571 (14)
O15523 (14)
O43143 (14)
O43390 (14)
O60506 (14)
O60832 (14)
O94973 (14)
O95678 (14)
O95782 (14)
O95782-2 (14)
P02533 (14)
P02538 (14)
P02545 (14)
P02545-2 (14)
P02545-3 (14)
P02786 (14)
P04259 (14)

ENSEMBL ID

ENSG00000170477 (12)
ENSG00000247315 (7)
ENSG00000147251 (4)

CHEBI ID

CHEBI:81321 (3)
CHEBI:15682 (3)
CHEBI:33404 (3)
CHEBI:17822 (3)
CHEBI:16708 (3)
CHEBI:16750 (3)
CHEBI:17154 (3)
CHEBI:17620 (3)
CHEBI:17376 (3)
CHEBI:15756 (3)
CHEBI:30769 (3)
CHEBI:9047 (2)
CHEBI:72775 (2)
CHEBI:30830 (2)
CHEBI:28328 (2)
CHEBI:18125 (2)
CHEBI:17164 (2)
CHEBI:9299 (2)
CHEBI:30860 (2)
CHEBI:63153 (2)
CHEBI:28931 (2)
CHEBI:17521 (2)
CHEBI:17057 (2)
CHEBI:17992 (2)
CHEBI:16852 (2)
CHEBI:36090 (2)
CHEBI:28635 (2)
CHEBI:16217 (2)
CHEBI:18287 (2)
CHEBI:16450 (2)

Metabolite Name

Glutamine (4)
Adenine (4)
L-Leucine (4)
L-Allothreonine (3)
Gallic acid (3)
Picolinic acid (3)
Glycine (3)
L-Alanine (3)
Arecoline (3)
Betaine (3)
L-Homophenylalanine (3)
Benzoic acid (3)
Allantoin (3)
Taurine (3)
Citric acid (3)
Isocitric acid (3)
Asparagine (3)
Serine (3)
Adenosine (3)
Guanosine (3)
Uridine (3)
Sucrose (3)
Inosine (3)
Hypoxanthine (3)
Guaiacyl phenylacetate (2)
2,4,6-Tri-tert-butylphenol (2)
[(2R)-2-(14-methylhexadecanoyloxy)-3-phosphonooxypropyl] docosanoate (2)
1-(11Z-octadecenoyl)-2-(9Z-hexadecenoyl)-sn-glycero-3-phosphocholine (2)
Dl-Methamphetamine (2)
1-O-Hexadecyl-2-O-ethyl-SN-glycero-3-phosphorylcholine (2)

Study type

RNA-seq of coding RNA (7)
Transcription profiling by array (4)
ChIP-seq (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2025 (414)
2022 (381)
2024 (354)
2023 (338)
2021 (304)
2020 (184)
2019 (141)
2018 (95)
2026 (77)
2017 (63)
2016 (60)
2015 (41)
2014 (31)
2013 (18)
2010 (11)
2011 (10)
2012 (8)
2009 (5)
2008 (4)
2006 (2)
2005 (2)
2004 (1)
1998 (1)

Lab affiliation

Department of Laboratory Medicine, Ren Ji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China. (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
The Fifth Affiliated Hospital of Guangzhou Medical University (2)
1 Department of Cardiology, Zhongshan Hospital, Fudan University, Shanghai Institute of Cardiovascular Diseases, China. 2 Department of Cardiovascular Medicine, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
1.Department of Otolaryngology-Head and Neck Surgery, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China 2.Ear Institute, Shanghai Jiao Tong University School of Medicine, Shanghai, China 3.Shanghai Key Laboratory of Translational Medicine on Ear and Nose Diseases, Shanghai, China (1)
Bioheat and mass transfer laboratory, Med-X Research Institute, Shanghai Jiao Tong University (1)
Department of Archaeology, Max Planck Institute for the Science of Human History, Jena, Germany. (1)
Department of Medicine, Division of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Department of Obstetrics and Gynecology, Shanghai Jiao Tong University Affiliated Sixth People’s Hospital, Shanghai Jiao Tong University School of medicine (1)
Department of Respiratory and Critical Care Medicine, Beijing Institute of Respiratory Medicine and Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China (1)
John Cijiang He, MD/PhD Division of Nephrology, Box 1243 Mount Sinai School of Medicine One Gustave L Levy Place, New York NY 10029 Tel: 212-659-1703, Fax: 212-987-0389 (1)
Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and Technology, Jinan University (1)
School of Biomedical Sciences, The Chinese University of Hong Kong, Hong Kong SAR (1)
School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing 100083, China. (1)
Shanghai Children Medical Center, School of Medicine, Shanghai Jiao Tong University (1)
Shanghai Diabetes Institute, Department of Endocrinology and Metabolism, Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine (1)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (1)
Shanghai Jiao Tong University (1)
Shanghai Jiao Tong University Affiliated Sixth People's Hospital (1)
Shanghai Jiao Tong University Ming Yu Lab (1)
Shanghai Jiao Tong University School of Medicine (1)
State Key Laboratory of Genetic Engineering, Institutes of Biomedical Sciences, Human Phenome Institute, School of Life Sciences, Zhongshan Hospital, Fudan University (1)
State Key Laboratory of Microbial Metabolism, and School of Life Sciences & Biotechnology, Shanghai Jiao Tong University, Shanghai, China (1)
State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry (1)
University of science and technology (1)
University of science and technology Beijing (1)
Xi’an Jiao Tong University Health Science Center (1)

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Effects of Yulin Tong Bu formula on modulating gut microbiota and fecal metabolite interactions in mice with polycystic ovary syndrome

BACKGROUND: Polycystic ovarian syndrome (PCOS) is a common endocrine disorder characterized by hyperandrogenism, ovarian dysfunction and polycystic ovarian morphology. Gut microbiota dysbiosis and metabolite are associated with PCOS clinical parameters. Yulin Tong Bu formula (YLT...

2023-02-02 | MTBLS6736 | MetaboLights

Two new species of the genus <i>Trilacuna</i> Tong & Li, 2007 (Araneae, Oonopidae) from the Nangunhe Nature Reserve, Yunnan Province, China.

Not available

S-EPMC12673334 | biostudies-literature

Metabolic Signatures of Kidney Yang Deficiency Syndrome and Protective Effects of Two Herbal Extracts in Rats Using GC/TOF MS.

Not available

S-EPMC3789486 | biostudies-literature

Proteomic Profiling and Functional Analysis of B Cell-Derived Exosomes upon Pneumocystis Infection

Pneumocystis is a life-threatening fungal pathogen frequently causing fatal pneumonia (PCP) in immunocompromised individuals with high mortality. Recently, B cells have been reported to play a crucial role in the pathogenesis of PCP through producing antibodies and activating CD4+ T cell response. E...

ORGANISM(S): Mus musculus (Mouse)

2022-04-26 | PXD030103 | Pride

Transcriptional Factor Yin Yang 1 Promotes the Stemness of Breast Cancer Cells by Suppressing miR-873-5p Transcriptional Activity.

Not available

S-EPMC7381513 | biostudies-literature

Increased Nuclear Transporter IPO7 Contributes to the Tumor Growth and Correlates with CD8 T cell Infiltration in Cervical Cancer

Background: Importin 7 (IPO7), a karyopherin-β protein, is involved in various tumorigenesis and progression abilities by mediating the nuclear import of oncoproteins. However, the exact biological functions and IPO7 remain to be further elucidated. Materials and Methods: TCGA and GEO datasets were...

ORGANISM(S): Homo sapiens (Human)

2022-02-17 | PXD026995 | Pride

Immune infiltration Cervical cancer. Proteome Mass spectrometry Ipo7

Single-Cell TCR Sequencing Reveals the Dynamics of T Cell Repertoire Profiling During Pneumocystis Infection.

Not available

S-EPMC8093776 | biostudies-literature

Glucose limitation activates AMPK coupled SENP1-Sirt3 signalling in mitochondria for T cell memory development.

Not available

S-EPMC8285428 | biostudies-literature

YY1 is involved in homologous recombination inhibition at guanine quadruplex sites in human cells.

Not available

S-EPMC11260479 | biostudies-literature