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ProteomicsMultiomics analysis of a DNAH5-mutated PCD organoid model revealed the key role of the TGF-β/BMP and Notch pathways in epithelial differentiation and the immune response in DNAH5-mutated patients
Dynein axonemal heavy chain 5 (DNAH5) is the most mutated gene in primary ciliary dyskinesia (PCD), leading to abnormal cilia ultrastructure and function. Few studies have revealed the genetic characteristics and pathogenetic mechanisms of PCD caused by DNAH5 mutation. Here, we established a child P...
ORGANISM(S): Homo sapiens (Human) 
2023-03-11 | PXD038024 | Pride
Primary ciliary dyskinesia Immune response Airway organoid Dnah5 Multiomics analysis 
GenomicsHeterochromatin remodeling by CDK12 contributes to learning in Drosophila
We describe the epigenetic profiling of the H3K9me2 and HP1a in Drosophila third instar larvae before and after CDK12 depletion by RNA interference (RNAi). Here we show that CDK12 regulates heterochromatin dynamics in Drosophila chromosomes. Depletion of CDK12 induces the increased HP1a and H3K9me2 ...
ORGANISM(S): Drosophila melanogaster 
2015-11-02 | E-GEOD-63011 | biostudies-arrayexpress
Proteomicsproteomic analysis reveals the toxin diversity of the spider Macrothele bannaensis
pider toxins are an important and abundant source of bioactive compounds and represent molecular candidates for the development of novel compounds for use in medicine and agriculture. Despite the vast diversity of spider species, only a small fraction of them have been studied in detail regarding ve...
ORGANISM(S): Macrothele 
PXD065984 |
ProteomicsContext-dependent and disease-specific diversity in stress granules formed from preexisting protein interactions
Affinity-capture proteomics studies using endogenously tagged G3BP1 with APEX2 to capture the stress granule proteome at steady state and upon stress induction. This was done in 293T cells as well as induced pluripotent stem cells differentiated into neuronal progenitor cells.
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000081554 | MassIVE
ProteomicsProteome of M.barkeri MS under stress condition
This project contains two experimental proteome, one of which is that Methanosarcina barkeri MS was grown in 10 and 50 mM acetate, respectively. And in the second experiment, M.barkeri MS was grown in 1 and 7 g-N/L, respectively, where the acetate concentration was 10 mM. In order to study how this ...
ORGANISM(S): Methanosarcina Barkeri Ms 
2019-03-25 | PXD013207 |
ProteomicsProteomic analysis of Rhitymna verruca
Rhitymna verruca is a large nocturnal wandering spider and an important natural predator of agricultural and forestry pests, with its venom playing a key role in prey capture. However, systematic studies on the composition of its venom remain scarce. In this study, we performed an integrated analysi...
ORGANISM(S): Unclassified Sparassidae 
2025-10-29 | PXD070066 |
ProteomicsMetabonomics analyses of pgds engineering strain in Bacillus licheniformis CGMCC 2876
In order to study the changes of metabolic pathways in recombinant strain Bl/pP2967-pgdS, non-targeted metabolomics was used for omics analysis of metabolites in the original and pgds engineering strains..
ORGANISM(S): Bacillus Licheniformis 
PXD042048 |
ProteomicsProteogenomic landscape of the Esophageal Squamous Cell Cancer reveals the lipid droplet formation process as a novel therapeutic target
The integrated proteogenomic analysis revealed proteomic characteristics associated with genomic variants and clinical features including arm or focal amplifications, SNV mutations, tumor size, lymph node metastasis, smoking history.
ORGANISM(S): Homo Sapiens 
2025-03-24 | PXD062163 |
ProteomicsGenetic origin and evolution of bioluminescence of fireflies
provide new perspectives and important resources for further exploring bioluminescence origin and evolution in insects
ORGANISM(S): Lamprigera Yunnana 
PXD015226 |
ProteomicsThe origin and evolution of bioluminescence of fireflies
provide new perspectives and important resources for further exploring bioluminescence origin and evolution in insects
ORGANISM(S): Luciola Terminalis 
PXD015227 |
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