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Rice is one of the most important staple food and model species in plant biology, yet the quantitative proteomes of rice are largely uncharacterized. Here we quantify the relative protein levels of over 15,000 genes across rice major tissues using a tandem mass tag strategy followed by intensive fra...
ORGANISM(S): Oryza sativa (Rice) 
2024-05-01 | PXD041188 | Pride
Studies have revealed dozens of functional peptides in putative ‘noncoding’ regions and raised the question of how many proteins are encoded by noncanonical open reading frames (ORFs). We comprehensively annotated genome-wide translated ORFs across five eukaryotic by analyzing ribosome profiling rea...
ORGANISM(S): Homo sapiens (Human) 
2024-05-23 | PXD037658 | Pride
We conducted comparative proteomic sequencing of Akkermansia muciniphila (Akk) and its extracellular vesicles (Akk-EVs) to identify functional protein components within Akk-EVs responsible for alleviating disease progression
ORGANISM(S): Trypanosoma brucei Akkermansia muciniphila 
2026-06-08 | PXD062069 | Pride
Microarray analyses were performed to compare the gene expression profiles of wild-type and several mutant strains of the ciliated protozoan Tetrahymena thermophila. Elimination of H3K4 methylation (hht2-K4Q) and knockout of either of the ubiquitylation enzymes (delta-UBC2 and delta-BRE1) affects a ...
ORGANISM(S): Tetrahymena thermophila 
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