Yes-associated protein

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Transcriptomics (3363)
Unknown (1449)
Genomics (211)
Proteomics (46)
Metabolomics (4)
Methylation profiling (3)
Other (2)
Models (1)

Organisms

Homo sapiens (1373)
Mus musculus (933)
Rattus norvegicus (121)
Arabidopsis thaliana (90)
Saccharomyces cerevisiae (61)
Drosophila melanogaster (61)
Schizosaccharomyces pombe (60)
Sus scrofa (36)
Danio rerio (35)
Gallus gallus (33)
Bos taurus (30)
Caenorhabditis elegans (25)
Zea mays (18)
Oryza sativa (18)
Escherichia coli (18)
Oryza sativa Japonica Group (12)
Canis lupus familiaris (12)
Medicago truncatula (10)
Macaca mulatta (9)
Oncorhynchus mykiss (9)
Ovis aries (7)
Carassius auratus (6)
Staphylococcus aureus (6)
Salmonella enterica subsp. enterica serovar Typhimurium (6)
Salmo salar (6)
Colinus virginianus (5)
Equus caballus (5)
Xenopus laevis (5)
Neisseria meningitidis (5)
Mycobacterium tuberculosis H37Rv (5)

Organisms

Homo sapiens (66)
Mus musculus (52)
Rattus norvegicus (7)
Danio rerio (2)
Bos indicus x Bos taurus (1)
Mus musculus musculus (1)

Repository

biostudies-arrayexpress (3316)
ENA (149)
geo (127)
pride (13)
MassIVE (8)
jPOST (6)
iProX (4)
MetaboLights (4)
EGA (2)
BioModels (1)

Tissue

Cell culture (4)
Liver (2)
Conidium (1)
Egg (1)
Embryonic stem cell (1)
Fungal cell (1)
Heart (1)
Hepatic stellate cell (1)
Mycelium (1)
Ovary cell line (1)
Sclerotium (1)

Disease

Normal (4)
Glioblastoma (2)
Testicular seminoma (1)
CLL (1)
Arrhythmias and right ventricular dysfunction (1)
GIP-dependent Cushing's syndrome (1)
HPV positive (1)
Osteosarcoma subtype fibroblastic (1)
High grade glioblastoma (1)
Cocaine addiction (1)
Primary effusion lymphoma (PEL) (1)
DNA damage (1)
Uninfected (1)
Schizophrenia (1)
Infected (1)
IBDV infected (1)
Renal cell carcinoma (1)
Prostate carcinoma (1)
Adenocarcinoma (1)
Breast cancer (1)
Liver disease (1)
Renal fibrosis (1)

Technology Type

Mass Spectrometry (13)
Data-dependent acquisition (6)
Shotgun proteomics (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry assay (3)
Bottom-up proteomics (3)
Mass spectrometry (2)
NMR spectroscopy (1)

Instrument Platform

Illumina NovaSeq 6000 (10)
Illumina HiSeq 2000 (7)
NextSeq 500 (7)
Illumina MiSeq (6)
Illumina HiSeq 2500 (6)
ScanArray Express HT (5)
Axon GenePix 4000B scanning hardware (3)
Orbitrap Fusion Lumos (3)
Illumina Genome Analyzer II (2)
BGISEQ-500 (2)
Illumina HiSeq 4000 (2)
Agilent 2100 Bioanalyzer, Applied Biosystems 7900HT Sequence Detection System, Illumina TruSeq Small RNA Sample Preparation Kit (1)
RNeasy mini Kit, Ribo-Zero Human/Mouse/Rat kit (1)
Solexa 2G Genome Analyzer (1)
Agilent 2100 Bioanalyzer (1)
GeneChip Scanner 3000 [Affymetrix] (1)
G2565AA DNA microarray scanner [Agilent] (1)
Illumina Genome Analyzer IIx (1)
Illumina NovaSeq X (1)
Ion Torrent Proton (1)
MinION (1)
NextSeq 550 (1)
6560 Q-TOF LC/MS (1)
NanoACQUITY UPLC (1)
Orbitrap Fusion (1)
Q Exactive (1)
Synapt G2 HDMS (1)
Synapt G2-S MS (1)
Flow injection analysis MS – POS (1)
Liquid Chromatography MS – NEG (1)

Publication Date

2015 (577)
2010 (538)
2013 (458)
2014 (372)
2012 (371)
2011 (362)
2008 (158)
2016 (152)
2009 (149)
2007 (77)
2022 (35)
2005 (29)
2024 (28)
2026 (24)
2006 (24)
2020 (22)
2025 (21)
2023 (18)
2021 (16)
2018 (14)
2019 (13)
2004 (10)
2003 (6)
2017 (3)
2002 (2)

CHEBI ID

CHEBI:16349 (4)
CHEBI:15891 (4)
CHEBI:18050 (4)
CHEBI:16643 (4)
CHEBI:16828 (4)
CHEBI:16040 (3)
CHEBI:18295 (3)
CHEBI:17066 (3)
CHEBI:17443 (3)
CHEBI:15760 (3)
CHEBI:17752 (3)
CHEBI:16870 (3)
CHEBI:15428 (3)
CHEBI:17929 (3)
CHEBI:15727 (3)
CHEBI:17196 (3)
CHEBI:17750 (3)
CHEBI:73024 (3)
CHEBI:18183 (3)
CHEBI:15971 (3)
CHEBI:16704 (3)
CHEBI:16015 (3)
CHEBI:16919 (3)
CHEBI:17596 (3)
CHEBI:17712 (3)
CHEBI:18344 (3)
CHEBI:17368 (3)
CHEBI:62976 (2)
CHEBI:28931|CHEBI:16027 (2)
CHEBI:67119|CHEBI:16264 (2)

Metabolite Name

Xanthine (3)
3'-AMP|AMP (2)
UDP-alpha-D-galactose|UDP-N-acetyl-alpha-D-glucosamine (2)
GDP-glucose|GDP-mannose (2)
All-trans-Pentaprenyl diphosphate|di-trans,poly-cis-Pentaprenyl diphosphate (2)
Glycodeoxycholate|Glycochenodeoxycholate (2)
FMN|Riboflavin cyclic-4',5'-phosphate (2)
4-[2-(5-Carboxy-2-hydroxy-3-methoxyphenyl)-2-oxoethylidene]-2-hydroxy-2-pentenedioate (2)
1-O-[2-(Acetylamino)-2-deoxy-alpha-D-glucopyranosyl]-D-myo-Inositol|N-Acetyllactosamine|Lacto-N-biose (2)
S-Adenosyl-L-homocysteine|Acetyl-maltose (2)
N-(5-Phospho-D-ribosyl)anthranilate|1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate (2)
3alpha,7alpha-Dihydroxy-12-oxo-5beta-cholate|3alpha,12alpha-Dihydroxy-7-oxo-5beta-cholate (2)
3-Ketolactose|3-Ketosucrose|Cellobiono-1,5-lactone (2)
S-Inosyl-L-homocysteine (2)
AMP|3'-AMP (2)
N-(L-Arginino)succite|N-Succinyl-LL-2,6-diaminoheptanedioate (2)
2-Amino-4-hydroxy-6-(D-erythro-1,2,3-trihydroxypropyl)-7,8-dihydropteridine|Nicotimide-beta-riboside (2)
Inosine|2-O-(alpha-D-Mannosyl)-D-glycerate|3-Deoxy-D-glycero-D-galacto-non-2-ulosonic acid (2)
4-Carboxy-4'-sulfoazobenzene (2)
N(alpha)-gamma-L-Glutamylhistamine|beta-Alanyl-N(pi)-methyl-L-histidine|Homocarnosine (2)
N6-Acetyl-LL-2,6-diaminoheptanedioate|4-(L-gamma-Glutamylamino)butanoate|gamma-L-Glutamyl-L-2-aminobutyrate (2)
5-(L-Alanin-3-yl)-2-hydroxy-cis,cis-mucote 6-semialdehyde|4-(L-Alanin-3-yl)-2-hydroxy-cis,cis-mucote 6-semialdehyde|4,5-seco-Dopa (2)
7-(3-Methylbut-2-enyl)-L-tryptophan|4-(3-Methylbut-2-enyl)-L-tryptophan (2)
Ophthalmate|Tabtoxin|Isotabtoxin (2)
Dimethylallyl diphosphate|Isopentenyl diphosphate (2)
Gamma-Glutamyl-gamma-aminobutyraldehyde|4-Amino-2-methyl-5-(phosphooxymethyl)pyrimidine|9-Riburonosylhypoxanthine (2)
3-beta-D-Galactosyl-sn-glycerol|2-O-(alpha-D-Glucopyranosyl)glycerol (2)
D-Octopine|L-N2-(2-Carboxyethyl)arginine (2)
L-2-Methyltryptophan|Abrine (2)
D-Galactaro-1,4-lactone|D-Glucaro-1,4-lactone (2)

IsPrivate

False (1)

Submitter Keywords

Not Peer Reviewed (1)

First Public Date

2025 (25)
2026 (19)
2024 (19)
2020 (17)
2023 (15)
2022 (10)
2019 (10)
2018 (10)
2021 (7)
2014 (6)
2017 (5)
2015 (3)
2016 (2)
2013 (1)

Modelling Approach

Partial differential equation model (1)

Study type

Transcription profiling by array (2369)
RNA-seq of coding RNA (417)
Unknown experiment type (120)
RNA-seq of non coding RNA (85)
ChIP-chip by tiling array (46)
Comparative genomic hybridization by array (44)
Other (44)
ChIP-seq (40)
Transcription profiling by SAGE (33)
Methylation profiling by array (29)
Transcription profiling by tiling array (17)
Transcription profiling by RT-PCR (16)
Proteomic profiling by array (16)
Methylation profiling by high throughput sequencing (6)
Genotyping by array (5)
High-throughput sequencing (4)
ChIP-chip by array (4)
RNAi profiling by array (3)
DNA-seq (3)
MicroRNA profiling by high throughput sequencing (2)
ChIP-chip by SNP array (1)
Transcription profiling by MPSS (1)
Baseline (1)
Differential (1)
Human - One-color microarray (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Proteomic profiling by mass spectrometer (1)
Bisulfite-seq (1)
MicroRNA profiling by array (1)

Release Date

2015 (626)
2010 (542)
2013 (471)
2014 (402)
2012 (384)
2011 (367)
2016 (198)
2022 (189)
2021 (173)
2020 (166)
2025 (165)
2008 (160)
2024 (159)
2009 (149)
2023 (143)
2019 (124)
2018 (91)
2007 (79)
2017 (73)
2005 (31)
2006 (26)
2026 (22)
2004 (11)
2003 (6)
2002 (3)
2001 (2)
2000 (1)

Lab affiliation

Core Facility for Mass Spectrometry & Proteomics Center for Molecular Biology of Heidelberg University Heidelberg, Germany (1)
Core Facility for Mass Spectrometry and Proteomics, Center for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, 69120 Heidelberg, Germany (1)
Core facility for mass spectrometry and proteomics, ZMBH, University Heidelberg, IM Neuenheimer Feld 282, 69120 Heidelberg, Germany (1)
Department II of Internal Medicine and Center for Molecular Medicine Cologne, University of Cologne and University Hospital Cologne, Cologne, Germany (1)
Institute of Zoology and Biomedical Research Laboratory of Physiology and Toxicology of Reproduction, Faculty of Biology, Jagiellonian University, Krakow, Poland (1)
Joseph C. Wu, MD, PhD Director, Stanford Cardiovascular Institute Simon H. Stertzer, MD, Professor of Cardiovascular Medicine & Radiology Stanford University School of Medicine Lorry I. Lokey Stem Cell Research Building 265 Campus Drive, Rm G1120B Stanford, CA 94305-5454 Phone: (650) 736-2246 (1)
Leibniz Institute on Aging - Fritz Lipmann Institute (1)
Miniaturization for Synthesis, Analysis & Proteomics, UAR 3290, CNRS, University of Lille, 59655 Villeneuve d’Ascq Cedex, France (1)
Nanjing University of Chinese Medicine and China Pharmaceutical University (1)
Proteomics and Metabolomics Unit, Basic Research Department, Children's Cancer Hospital 57357 Cairo, (CCHE-57357), Cairo 11562, Egypt. (1)
School of Life Sciences and Biotechnology (1)
USDA-ARS Crop Protection and Management Research Unit Tifton, GA 31794 (1)
Université Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198, Gif-sur-Yvette, France (1)

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Oocyte-expressed Yes-associated Protein (YAP) is a Key Activator of the Early Zygotic Genome in Mouse

We generated maternal and paternal mouse models with Yap1-deletion, and elucidated the function of maternal YAP in zygotic genome activation. RNA sequencing with 2 WT oocyte samples at GV stage, 2 YAP-/- oocyte samples at GV stage, 1 WT embryo samples at 4cell stage, 1 YAP-/- embryo samples at at 4-...

ORGANISM(S): Mus musculus

2016-02-28 | E-GEOD-74344 | biostudies-arrayexpress

Gene expression data from livers of Yap+/+ and Yap+/- mice at postnatal day 30

Liver undergoes both size increase and differentiation during postnatal period, which in mice is approximately first 30 days. The mechanisms of simultaneous postnatal liver cell proliferation and maturation are not clear. In these experiments, role of yes associated protein (Yap), the downstream eff...

ORGANISM(S): Mus musculus

2012-04-04 | E-GEOD-31281 | biostudies-arrayexpress

Human Yes Associated Protein (hYAP) expressing mouse liver

PRJNA384350 | ENA

Progesterone, via yes-associated protein (YAP), promotes cardiomyocyte proliferation and cardiac repair

PRJNA608653 | ENA

JNK phosphorylates Yes-associated protein (YAP) to regulate apoptosis.

Not available

S-EPMC3032333 | biostudies-literature

Multivalent Angiomotin-like 1 and Yes-associated protein form a dynamic complex.

Not available

S-EPMC8994507 | biostudies-literature

Yes-associated protein in hepatocytes protects against early alcohol-associated liver disease

PRJNA1308533 | ENA

Matrix stiffness epigenetically regulates the oncogenic activation of the Yes-associated protein in gastric cancer

PRJNA673653 | ENA

Role of Yes-Associated Protein 1 (YAP1) in rhabdomyosarcoma

Doxycycline-inducible YAP1 S127A-driven rhabdomyosarcoma (RMS) tumors, control skeletal muscle and regressed tumors following YAP1 normalization by doxycycline withdrawal were compared to determine the YAP1-regulated gene expression profile relevant to RMS formation. To characterize the role of YAP1...

ORGANISM(S): Mus musculus

2014-08-12 | E-GEOD-47198 | biostudies-arrayexpress

Yes-associated protein mediates immune reprogramming in pancreatic ductal adenocarcinoma.

Not available

S-EPMC5322249 | biostudies-literature

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5079 Results

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Organisms

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