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ProteomicsQuantitative proteomics of iron limitation in Klebsiella pneumoniae
Nutrient adaptation is key in limiting environments for the promotion of microbial growth and survival. In microbial systems, iron is an essential component for many cellular processes and bioavailability varies greatly among different conditions. In the bacterium, Klebsiella pneumoniae, the impact ...
ORGANISM(S): Klebsiella pneumoniae 
2020-03-09 | PXD015623 | Pride
Quantitative proteomics Lon protease Iron limitation Klebsiella pneumoniae Secretome 
ProteomicsProteomic profiling of murine ocular surface during Pseudomonas aeruginosa infection
Mass spectrometry-based proteomics by bottom-up approaches enables the unbiased and sensitive profiling of cellular proteomes and extracellular environments. Recent technological and bioinformatic advances permit identifying of dual biological systems in a single experiment, supporting investigation...
ORGANISM(S): Mus musculus (Mouse) Pseudomonas aeruginosa PAO1 
2020-01-09 | PXD015362 | Pride
Eye wash Neutrophils Cornea Pseudomonas aeruginosa Quantitative proteomics 
ProteomicsKpneumoniae - Whole organism, iBAQ (Museliusetal,frontmicrobiol2020)
abundance based on iBAQ, Interaction consistency score: 14.0, Coverage: 48
ORGANISM(S): 272620 
2020-00-00 | 2596730017 | PAXDB
ProteomicsKpneumoniae - Whole organism, iBAQ (Museliusetal,frontmicrobiol2020)
abundance based on iBAQ, Interaction consistency score: 12.8, Coverage: 48
ORGANISM(S): 272620 
2020-00-00 | 3615218841 | PAXDB
ProteomicsKpneumoniae - Whole organism, iBAQ (Museliusetal,frontmicrobiol2020)
abundance based on iBAQ, Interaction consistency score: 13.2, Coverage: 48
ORGANISM(S): 272620 
2020-00-00 | 1693104356 | PAXDB
UnknownCEP192 localises mitotic Aurora-A activity by priming its interaction with TPX2
Not available
S-SCDT-10_1038-S44318-024-00240-Z | biostudies-other
Genomicsena-DATASET-DAVELAB-22-03-2017-21:30:50:663-38 - samples
Whole exome sequencing of hepatosplenic T cell lymphoma (HSTL) tumors, paired normals, and cell lines, including (1) 68 exome capture, paired-end Illumina Hiseq sequencing, BAM files from HSTL tumor samples, (2) 20 exome capture, paired-end Illumina Hiseq sequencing, BAM files from HSTL paired norma...
EGAD00001003246 | EGA
GenomicsGenetic Basis of Hepatosplenic T Cell Lymphoma (HSTL)
Hepatosplenic T cell lymphoma (HSTL) is a rare and lethal lymphoma; the genetic drivers of this disease are unknown.  Through whole exome sequencing of 68 HSTLs, we define recurrently mutated driver genes and copy number alterations in the disease. Chromatin modifying genes including SETD2, INO80 an...
EGAS00001002182 | EGA
GenomicsDAC for Dave Lab, Duke University
Data Access Committee EGAC00001000538
EGAC00001000538 | EGA
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