Yi Yi Y - OmicsDI

Show results for

Unknown (8713)
Proteomics (471)
Transcriptomics (269)
Genomics (90)
Metabolomics (59)
Multiomics (4)
Models (1)

Organisms

Homo sapiens (341)
Mus musculus (183)
Halobacterium salinarum NRC-1 (55)
Rattus norvegicus (12)
Arabidopsis thaliana (11)
Daphnia pulex (9)
Saccharomyces cerevisiae (7)
Escherichia coli (5)
Zea mays (4)
Gallus gallus (4)
Mus (4)
Citrus limonia (3)
Danio rerio (3)
Enterococcus faecalis (3)
Ovis aries (3)
Rattus rattus (3)
Macaca mulatta (2)
Neurospora crassa (2)
Bos taurus (2)
Sus scrofa (2)
Aspergillus nidulans FGSC A4 (1)
Oryza rufipogon (1)
Mustela putorius furo (1)
Brassica rapa subsp. chinensis (1)
Schmidtea mediterranea (1)
Pan troglodytes (1)
Brassica napus (1)
Helicobacter pylori (1)
Oryza sativa Japonica Group (1)
Candida albicans (1)

Organisms

Halobacterium salinarum NRC-1 (32)
Mus musculus (2)
Sus scrofa (1)
Homo sapiens (1)

Repository

biostudies-arrayexpress (255)
iProX (249)
pride (140)
MetaboLights (54)
MassIVE (44)
EGA (38)
ENA (36)
geo (32)
PeptideAtlas (29)
GNPS (5)
jPOST (5)
PAXDB (2)
BioModels (1)
PanoramaPublic (1)

Tissue

Cell culture (41)
Epithelial cell (13)
Permanent cell line cell (10)
Blood plasma (7)
Liver (7)
Blood (5)
Embryonic stem cell (4)
Whole body (4)
Blood serum (3)
Brain (3)
Fibroblast (3)
Heart (3)
Hepatocyte (3)
Plant cell (3)
Adrenal adenoma cell (2)
Cell suspension culture (2)
Extracellular vesicle (2)
HeLa cell (2)
Kidney (2)
Macrophage (2)
Mammary gland epithelial cell (2)
Skeletal muscle (2)
Stem cell (2)
T cell (2)
Brain (1)
A549-CR cell (1)
Anterior silk gland (1)
B cell (1)
B-cell lymphoma cell (1)
Cardiocyte (1)

Disease

Breast cancer (5)
Disease free (4)
Cervix carcinoma (3)
Age related macular degeneration (2)
Influenza (2)
Malignant neoplasm of ovary (2)
Type 2 diabetes mellitus (2)
Acute leukemia (1)
Cardiomyopathy (1)
Charcot-Marie-Tooth disease (1)
Chromophobe renal cell carcinoma (1)
Colon cancer (1)
Disease of metabolism (1)
Head and neck squamous cell carcinoma (1)
Hepatocellular carcinoma (1)
Idiopathic pulmonary fibrosis (1)
Intestinal disease (1)
Liver cancer (1)
Lung adenocarcinoma (1)
Lymphoma (1)
Multidrug-resistant tuberculosis (1)
Multiple myeloma (1)
Non-small cell lung carcinoma (1)
Prostate adenocarcinoma (1)
Renal cell carcinoma (1)
Wiskott-Aldrich syndrome (1)

Technology Type

Mass Spectrometry (140)
Shotgun proteomics (53)
Mass spectrometry (43)
Bottom-up proteomics (21)
Gel-based experiment (18)
Affinity purification coupled with mass spectrometry proteomics (17)
Data-dependent acquisition (13)
Mass spectrometry assay (8)
Top-down proteomics (7)
Data-independent acquisition (6)
SWATH MS (5)
NMR spectroscopy (4)
SRM/MRM (4)
Chemical cross-linking coupled with mass spectrometry proteomics (3)
Mass spectrometry imaging (3)
Illumina HiSeq 2000 (2)
Illumina HiSeq 2000, ILLUMINA (2)
All-ion fragmentation (2)
HDMSE (2)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
Illumina 2.5M, Illumina HiSeq 2000 (1)
DiaPASEF (1)
Metaproteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (19)
Liquid Chromatography MS - negative - reverse phase (15)
Q Exactive (8)
Q Exactive Plus (8)
Liquid Chromatography MS - negative - hilic (7)
Liquid Chromatography MS - positive - hilic (7)
Orbitrap Fusion Lumos (6)
LTQ Orbitrap Elite (4)
Q Exactive HF (3)
Orbitrap Eclipse (3)
Orbitrap Exploris 480 (3)
Illumina NovaSeq 6000 (2)
Agilent 5975C Series GC/MSD (2)
LTQ FT (2)
MaXis (2)
TripleTOF 6600 (2)
LTQ Orbitrap Velos (2)
Orbitrap Fusion (2)
Bruker (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - (2)
10X Genomics Chromium Single Cell Kit (1)
Illumina HiSeq 2000 (1)
6540 Q-TOF LC/MS (1)
Orbitrap Elite mass spectrometer(Thermo) (1)
Orbitrap Exploris 240 (1)
Q Exactive HF-X (1)
TimsTOF HT (1)
TripleTOF 5600 (1)
Velos Plus (1)

Publication Date

2023 (107)
2024 (84)
2010 (83)
2022 (67)
2025 (53)
2021 (50)
2008 (44)
2026 (43)
2012 (34)
2020 (34)
2014 (32)
2011 (32)
2013 (30)
2015 (24)
2009 (16)
2006 (16)
2019 (16)
2016 (15)
2018 (14)
2017 (10)
2005 (3)
2007 (3)
2004 (2)

UNIPROT ID/AC

14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
1433B_HUMAN (1)
1433E_HUMAN (1)
1433F_HUMAN (1)
1433G_HUMAN (1)
1433S_HUMAN (1)
1433T_HUMAN (1)
1433Z_HUMAN (1)
2A5A_HUMAN (1)
2A5D_HUMAN (1)
2A5E_HUMAN (1)
2A5G_HUMAN (1)
2AAA_HUMAN (1)
2AAB_HUMAN (1)
2ABA_HUMAN (1)
2ABD_HUMAN (1)
3BHS1_HUMAN (1)
3HIDH_HUMAN (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)

ENSEMBL ID

ENSG00000170477 (1)
ENSG00000229353 (1)

CHEBI ID

CHEBI:16704 (18)
CHEBI:17368 (17)
CHEBI:17568 (17)
CHEBI:30769 (17)
CHEBI:16708 (16)
CHEBI:15756 (15)
CHEBI:16335 (14)
CHEBI:17351 (14)
CHEBI:17895 (14)
CHEBI:15354 (13)
CHEBI:15891 (13)
CHEBI:15971 (13)
CHEBI:16040 (13)
CHEBI:16467 (13)
CHEBI:17154 (13)
CHEBI:17295 (13)
CHEBI:17509 (13)
CHEBI:17596 (13)
CHEBI:17992 (13)
CHEBI:30746 (13)
CHEBI:32816 (13)
CHEBI:48131 (13)
CHEBI:15428 (12)
CHEBI:16196 (12)
CHEBI:16566 (12)
CHEBI:16643 (12)
CHEBI:16750 (12)
CHEBI:17361 (12)
CHEBI:17562 (12)
CHEBI:17687 (12)

Metabolite Name

Hypoxanthine (16)
Adenosine (14)
Adenine (13)
Creatinine (12)
Uracil (12)
Azelaic acid (11)
L-Arginine (11)
L-Proline (11)
Taurine (11)
Uridine (11)
Arachidonic acid (10)
Benzoic acid (10)
Creatine (10)
Cytidine (10)
Cytosine (10)
L-Histidine (10)
Oleic acid (10)
Sucrose (10)
Theophylline (10)
Betaine (9)
Citric acid (9)
Dodecanedioic acid (9)
L-Phenylalanine (9)
L-Tyrosine (9)
Uric acid (9)
Urocanic acid (9)
Acetylcholine (8)
Alanine (8)
Benzyl alcohol (8)
Bilirubin (8)

First Public Date

2014 (34)
2023 (1)
2017 (1)

Modelling Approach

Ordinary differential equation model (1)

Lab affiliation

1. Department of Biochemistry and Molecular Cell Biology, State Key Laboratory of Oncogenes and Related Genes, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Jiao Tong University School of Medicine. (2)
Agricultural Biotechnology Research Center, Academia Sinica, Taiwan (2)
CAS Key Laboratory of Tropical Marine Bio-resources and Ecology and Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Science. Guangzhou, China (2)
Department of Laboratory Medicine, West China Hospital, Sichuan University, Chengdu 610041, China. (2)
Department of Ophthalmology, LMU University Hospital, LMU Munich, Munich, Germany (2)
ETH Zurich (2)
George Washington University (2)
Institute of Medicinal Biotechnology, Chinese Academy of Medical Sciences and Peking Union Medical School (2)
Lab of Jie Zheng, Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Beijing 100083, P.R. China (2)
Personalized Genomic Medicine Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB) (2)
Seoul National University (2)
Shandong University (2)
Sun Yat-sen University (2)
the First Affiliated Hospital of Chongqing Medical University (2)
1. Ministry of Education Key Laboratory of Biosystems Homeostasis & Protection, College of Life Sciences, Zhejiang University, Hangzhou, China 2. Cancer Center, Zhejiang University, Hangzhou, China (1)
1Cancer Institute, the Second Affiliated Hospital, and Institute of Translational Medicine, Zhejiang University School of Medicine, Hangzhou 310029, China 2Cancer Center, Zhejiang University, Hangzhou 310058, China 3Research Center for Life Science and Human Health, Binjiang Institute of Zhejiang University, Hangzhou 310053, China (1)
Amphibian Evolution Lab Pleinlaan 2. 1050 Brussels Belgium (1)
Animal Clinical Pathology, College of Animal Science and Veterinary Medicine, Shandong Agricultural University,Shandong Province, China (1)
Assoc Prof Konstantin Pervushin SCHOOL OF BIOLOGICAL SCIENCES, Nanyang Technological University (1)
BGI-Shenzhen, Shenzhen, 518083,China (1)
Baylor College of Medicine (1)
Beijing Geriatric Healthcare and Disease Prevention Center, Xuanwu Hospital, Capital Medical University, Beijing, China. (1)
Bioprocessing Technology Institute (BTI), Agency for Science, Technology and Research (A*STAR), 20 Biopolis Way, #06-01 Centros, Singapore 138668, Singapore (1)
Bioscience Program, Biological and Environmental Science and Engineering Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Kingdom of Saudi Arabia (1)
CAS Key Laboratory of Infection and Immunity, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences (1)
Capital Institute of Pediatrics (1)
Case Western Reserve University School of Medicine (1)
Cell Fate Engineering and Therapeutics Lab, Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), 61 Biopolis Drive, Proteos, Singapore 138673, Republic of Singapore (1)
Center for Genomic Integrity, Institute for Basic Science, Ulsan 44919, Republic of Korea (1)
Center for Theragnosis, Korea Institute of Science and Technology, Seoul, Korea (1)