Yin Li L - OmicsDI

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Unknown (5868)
Proteomics (168)
Transcriptomics (150)
Metabolomics (27)
Genomics (24)
Multiomics (5)
Genomic (4)

Organisms

Homo sapiens (108)
Mus musculus (57)
Rattus norvegicus (8)
Gallus gallus (5)
Citrus limonia (3)
Staphylococcus aureus (3)
Saccharomyces cerevisiae (3)
Zea mays (3)
Bacillus subtilis (2)
Streptococcus pneumoniae (2)
Polypterus senegalus (1)
Metarhizium robertsii (1)
Haloferax mediterranei (1)
Streptomyces avermitilis (1)
unidentified microorganism (1)
Bean pod mottle virus (1)
Pimephales promelas (1)
Trichoderma reesei (1)
Limanda limanda (1)
Ambystoma mexicanum (1)
Gossypium hirsutum (1)
Bombyx mori (1)
Leishmania major (1)
Salmonella enterica subsp. enterica serovar Typhi (1)
Acidithiobacillus ferrooxidans ATCC 23270 (1)
Macaca mulatta (1)
Populus euphratica (1)
Mycobacterium avium (1)
Plasmodium falciparum 3D7 (1)
Schizosaccharomyces pombe (1)

Organisms

Mus musculus (1)

Repository

biostudies-arrayexpress (163)
pride (97)
iProX (62)
MetaboLights (27)
EGA (12)
MassIVE (5)
dbGaP (4)
PeptideAtlas (3)
ENA (1)

Tissue

Cell culture (29)
Liver (6)
Hepatocyte (4)
Others (3)
HEK-293T cell (3)
Skin (3)
Plant cell (3)
Leaf (3)
Primary cell (3)
Epithelial cell (3)
Melanocyte (2)
Embryonic stem cell (2)
Urine (2)
Blood serum (2)
Brain (2)
Embryo (2)
HeLa cell (2)
Whole body (2)
Blood cell (2)
Colon (2)
T cell (2)
IgG short lived plasma cell (1)
Ovary epithelium cell line (1)
Prostate epithelium (1)
T-cell acute lymphoblastic leukemia cell (1)
MIN6-N8 cell (1)
Hypha (1)
Wound fluid (1)
Testicular artery (1)
HCT-116 cell (1)

Disease

Disease free (3)
Type 1 diabetes mellitus (2)
Cardiovascular system disease (2)
Colon cancer (2)
Acute leukemia (2)
Breast abscess (1)
Osteogenesis imperfecta (1)
Proteus syndrome (1)
Ovarian cancer (1)
Skin melanoma (1)
Non-small cell lung carcinoma (1)
Prostate adenocarcinoma (1)
Systemic lupus erythematosus (1)
Lung cancer (1)
Human immunodeficiency virus infectious disease (1)
Chronic lymphocytic leukemia (1)
Melanoma (1)
Brain cancer (1)
Liver cancer (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (97)
Shotgun proteomics (40)
Mass spectrometry (25)
Bottom-up proteomics (15)
Affinity purification coupled with mass spectrometry proteomics (13)
Gel-based experiment (9)
Data-dependent acquisition (9)
Data-independent acquisition (6)
All-ion fragmentation (4)
Mass spectrometry assay (2)
Mass spectrometry imaging (2)
Top-down proteomics (2)
Illumina HiSeq 2000 (1)
Proteogenomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (14)
Liquid Chromatography MS - negative - reverse phase (14)
Illumina HiSeq 2500 (2)
Illumina NovaSeq 6000 (2)
Illumina HiSeq 4000 (2)
Q Exactive (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - negative (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
LTQ Orbitrap Elite (2)
GenePix4000B (1)
NanoDrop (1)
HiSeq X Ten (1)
Illumina MiSeq (1)
NextSeq 500 (1)
LTQ XL (1)
LTQ Orbitrap Velos (1)
Orbitrap Fusion Lumos (1)
Gas Chromatography MS - (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
5975C Series GC/MSD (Agilent) (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative - HILIC (1)
Liquid Chromatography MS - positive - HILIC (1)
QExactive (1)

Publication Date

2024 (33)
2010 (29)
2014 (28)
2023 (27)
2022 (27)
2025 (26)
2021 (22)
2016 (20)
2011 (20)
2012 (19)
2015 (18)
2013 (15)
2026 (10)
2020 (10)
2019 (6)
2017 (6)
2008 (6)
2009 (5)
2018 (5)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:17351 (9)
CHEBI:30769 (9)
CHEBI:16335 (8)
CHEBI:7916 (8)
CHEBI:15971 (8)
CHEBI:16015 (8)
CHEBI:17895 (8)
CHEBI:17596 (8)
CHEBI:30805 (7)
CHEBI:16708 (7)
CHEBI:16750 (7)
CHEBI:17748 (7)
CHEBI:28842 (7)
CHEBI:18183 (7)
CHEBI:18050 (7)
CHEBI:16411 (7)
CHEBI:15318 (7)
CHEBI:15756 (7)
CHEBI:16828 (7)
CHEBI:17752 (6)
CHEBI:17562 (6)
CHEBI:30832 (6)
CHEBI:15741 (6)
CHEBI:17268 (6)
CHEBI:16865 (6)
CHEBI:17196 (6)
CHEBI:17509 (6)
CHEBI:17012 (6)
CHEBI:15891 (6)
CHEBI:55328 (6)

Metabolite Name

Adenosine (6)
Adenine (6)
Cytidine (6)
Taurine (5)
L-Phenylalanine (5)
Inosine (5)
Hypoxanthine (5)
N6-Acetyl-L-lysine (4)
Pantothenate (4)
L-Proline (4)
N-Acetylornithine (4)
N-Acetylneuraminic acid (4)
5-Hydroxytryptophol (4)
Citric acid (4)
Lysine (4)
Guanine (4)
L-Tryptophan (4)
L-Glutamine (4)
Stachyose (4)
Xanthine (4)
Guanosine (4)
L-Tyrosine (4)
Quercetin (3)
(-)-alpha-Bisabolol (3)
N6,N6,N6-Trimethyl-L-lysine (3)
Sinapic acid (3)
5-Acetylamino-6-formylamino-3-methyluracil (3)
4-Hydroxycinnamic acid (3)
N-Acetylvanilalanine (3)
Leucine (3)

First Public Date

2022 (1)

Study type

Transcription profiling by array (88)
RNA-seq of coding RNA (26)
ChIP-seq (7)
Transcription profiling by RT-PCR (6)
Other (6)
RNA-seq of non coding RNA (6)
Methylation profiling by array (5)
Unknown experiment type (4)
Methylation profiling by high throughput sequencing (4)
RNA-seq of coding RNA from single cells (2)
Human - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Transcription profiling by tiling array (1)
ChIP-chip by array (1)
Genotyping by array (1)
Antigen profiling (1)
Comparative genomic hybridization by array (1)
RNA-seq of total RNA (1)

Release Date

2025 (950)
2022 (828)
2024 (754)
2023 (725)
2021 (611)
2020 (451)
2019 (327)
2018 (254)
2017 (248)
2016 (177)
2015 (147)
2026 (133)
2014 (126)
2013 (85)
2012 (63)
2011 (46)
2010 (41)
2009 (40)
2008 (12)
2006 (4)
2005 (4)
2004 (4)
2007 (1)

Lab affiliation

Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (3)
College of Pharmacy, Jinan University, Guangzhou, China (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou, 510006, Guangdong, P.R. China. (2)
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, Hubei,China (2)
Nankai University (2)
Zhejiang University (2)
Jinan University (2)
Pacific Northwest National Laboratory (2)
PI The Wistar Institute, Philadelphia, PA, USA; (1)
The State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, Hubei, China (1)
Precision Research Center for Refractory Diseases, Shanghai General Hospital,Shanghai Jiao Tong University School of Medicine (1)
Department of Health Management Center, Qilu Hospital, Cheeloo College of Medicine，Shandong University (1)
State Key Laboratory of Virology and Hubei Province Key Laboratory of Allergy and Immunology, Institute of Medical Virology, TaiKang Center for Life and Medical Sciences, TaiKang Medical School, Wuhan University (1)
Shanghai Diabetes Institute, Department of Endocrinology and Metabolism, Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine (1)
Faculty of Plant Science and Technology, Huazhong Agricultural University, China (1)
Institute of Systems Biomedicine, Department of Pathology, School of Basic Medical Sciences, Beijing Key Laboratory of Tumor Systems Biology, Peking-Tsinghua Center of Life Sciences, Peking University Health Science Center, Beijing 100191, China. (1)
Shenzhen People’s Hospital (The Second Clinical Medical College, Jinan University; The First Affiliated Hospital, Southern University of Science and Technology), Shenzhen 518020, China; School of Medicine, Southern University of Science and Technology, Shenzhen 518055 Guangdong, China (1)
Tianjin university of Traditional Chinese Medicine, Tianjin 300193, China (1)
University/Hospital: the Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) Street Name & Number: No. 1017, North of Dongmen Road, Shenzhen City, Guangdong Province 518020, China (1)
3. College of Pharmacy / International Cooperative Laboratory of Traditional Chinese Medicine Modernization and Innovative Drug Development of Ministry of Education (MOE) of China, Jinan University, Guangzhou 510632, China (1)
Key Laboratory of Functional Protein Research of Guangdong Higher Education Institutes, Institute of Life and Health Engineering, College of Life Science and 9 Technology, Jinan University, Guangzhou 510632, China (1)
the Second Clinical Medical College of Jinan University, Shenzhen People’s Hospital, Shenzhen (1)
The Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital), Shenzhen 518020, China (1)
Medical School of Nanjing University (1)
State Key Laboratory of Silkworm Genome Biology, College of Biotechnology, Southwest University, Chongqing , China. (1)
Institute for Cancer Research, Shenzhen Bay Laboratory, Shenzhen, Guangdong, 518107, China (1)
Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, 266071, Shandong, China (1)
Nephrology Department of Guilin No.924 Hospital, Guangxi Key Laboratory of Metabolic Diseases Research, Guilin Key laboratory of Kidney Diseases Research; Clinical Medical Research Center, The Second Clinical Medical College of Jinan University (Shenzhen People’s Hospital) (1)
Medical Research Institute, Wuhan University (1)

Tags

xref:PubMed:35154017 (1)

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Genes expression profiles of postmenopausal osteoporosis with kidney Yin deficiency

Investigate genes expression profiles of postmenopausal osteoporosis with kidney Yin deficiency in peripheral blood By TCM syndrome, 10 patients with postmenopausal osteoporosis were divided into three groups: kidney Yin deficiency (n=4), kidney Yang deficiency (n=3), non-kidney deficiency (n=3), a...

ORGANISM(S): Homo sapiens

2014-03-23 | E-GEOD-56116 | biostudies-arrayexpress

Gene expression profiles of Liuwei Dihuang Pill treatment postmenopausal osteoporosis with kidney Yin deficiency

Investigate gene expression profiles of Liuwei Dihuang Pill treatment postmenopausal osteoporosis with kidney Yin deficiency in peripheral blood Liuwei Dihuang Pill (LDP), a classic Chinese medicinal formula, has been used to treat PMO with kidney YIN deficiency for three months. Whole human genome ...

ORGANISM(S): Homo sapiens

2014-05-06 | E-GEOD-57273 | biostudies-arrayexpress

Regulation of the Endocytosis and Prion Chaperoning Machineries by Yeast E3 Ubiquitin Ligase Rsp5 as Revealed by Orthogonal Ubiquitin Transfer

Attachment of the ubiquitin (UB) peptide to proteins via the E1-E2-E3 enzymatic machinery regulates diverse biological pathways, yet identification of the substrates of E3 UB ligases remains a challenge. We overcame this challenge by constructing an “orthogonal UB transfer (OUT) cascade with yeast E...

ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast)

2022-10-13 | PXD023688 | Pride

Ubiquitin Lc-ms/ms

A The complete chloroplast genome and phylogenetic analysis of Bupleurum yinchowense Shan & Yin Li.

Not available

S-EPMC8018508 | biostudies-literature

3C-seq of HT29 cells with CCAT1-L knockdown or scramble knockdown

CCAT1-L is a highly expressed long noncoding RNA located in the colorectal cancer specific super enhance region about 500 kb upstream of MYC gene. Knockdown of CCAT1-L significantly down-regulated interaction frequency between CCAT1 and MYC locus and repress MYC expression, suggesting a long-range c...

ORGANISM(S): Homo sapiens

2014-02-22 | E-GEOD-55261 | biostudies-arrayexpress

A novel Saclayvirus Acinetobacter baumannii phage genomic analysis and effectiveness in preventing pneumonia.

Not available

S-EPMC11283397 | biostudies-literature

A Combined Proteomic and Metabolomic Strategy for Allergens Characterization in Natural and Fermented Brassica napus Bee Pollen

Bee pollen is consumed for its nutritional and pharmacological benefits, but it also contains hazardous allergens which has not been identified. Here, we identified 2 potential allergens, glutaredoxin and oleosin-B2, in Brassica napus (B. napus) bee pollen using mass spectrometr...

2022-03-23 | MTBLS3950 | MetaboLights

The complete chloroplast genome of Bupleurum marginatum var. stenophyllum (H. Wolff) Shan & Yin Li (Apiaceae), a new substitution for Chinese medicinal material, Bupleuri Radix (Chai hu).

Not available

S-EPMC7872558 | biostudies-literature

The Cd-tolerance of pepper (Capsicum annuum L.) is linked with rhizosphere bacterial community composition and rhizosphere soil metabolites profiles

Cadmium (Cd) poses a serious threat to plant growth, so the selection and breeding of Cd-tolerant pepper cultivars is an effective method to reduce Cd hazards. This study identified C. annuum G03 as a Cd-tolerant cultivar, evidenced by its superior leaf physiological activity under Cd stress comp...

2025-10-23 | MTBLS13200 | MetaboLights

The Protective Effect of Sheng Mai Yin on Diabetic Cardiomyopathy via NLRP3/Caspase-1 Pathway.

Not available

S-EPMC9731757 | biostudies-literature

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