Ying Qi Q - OmicsDI

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Unknown (35)
Proteomics (25)
Metabolomics (14)
Genomics (13)
Transcriptomics (6)

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Homo sapiens (29)
Mus musculus (10)
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Lentinula edodes (1)
Macaca fascicularis fascicularis (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)
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Repository

iProX (19)
EGA (12)
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biostudies-arrayexpress (7)
pride (4)
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Tissue

Cell culture (2)
Bladder cell (1)
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Disease

Urinary bladder cancer (1)

Technology Type

Mass spectrometry (10)
Mass Spectrometry (4)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-dependent acquisition (1)
Gel-based experiment (1)
Top-down proteomics (1)

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Liquid Chromatography MS - negative - reverse phase (9)
Liquid Chromatography MS - positive - reverse phase (8)
Q Exactive HF (2)
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Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
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Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

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2024 (12)
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2015 (3)
2013 (3)
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2025 (2)
2009 (1)
2019 (1)

CHEBI ID

CHEBI:15971 (5)
CHEBI:16325 (5)
CHEBI:16359 (5)
CHEBI:16704 (5)
CHEBI:16708 (5)
CHEBI:16750 (5)
CHEBI:16856 (5)
CHEBI:17568 (5)
CHEBI:17596 (5)
CHEBI:17687 (5)
CHEBI:17821 (5)
CHEBI:27471 (5)
CHEBI:36259 (5)
CHEBI:55328 (5)
CHEBI:9410 (5)
CHEBI:15354 (4)
CHEBI:16015 (4)
CHEBI:16027 (4)
CHEBI:16040 (4)
CHEBI:16235 (4)
CHEBI:16393 (4)
CHEBI:16467 (4)
CHEBI:16525 (4)
CHEBI:16566 (4)
CHEBI:16695 (4)
CHEBI:16755 (4)
CHEBI:17053 (4)
CHEBI:17154 (4)
CHEBI:17202 (4)
CHEBI:17203 (4)

Metabolite Name

CA (3)
CDCA (3)
DCA (3)
GCA (3)
GCDCA (3)
GDCA (3)
GLCA (3)
LCA (3)
TCA (3)
TCDCA (3)
TDCA (3)
TLCA (3)
TUDCA (3)
UDCA (3)
(+)-8'-hydroxyabscisic acid (2)
11-Dehydrocorticosterone (2)
12-hydroxy-10-dodecenoic acid (2)
3-Polyprenyl-4-hydroxy-5-methoxybenzoate (2)
3beta-hydroxy-4beta-methyl-5alpha-cholest-7-ene-4alpha-carbaldehyde (2)
5,7,9,11,13-tetradecapentaenoic acid (2)
7-oxo-8-amino-nonanoic acid (2)
ADP (2)
Agnuside (2)
Amastatin (2)
Bispyribac (2)
Bufotalin (2)
Caffeic acid 3-glucoside (2)
Calanolide A (2)
Cortisone acetate (2)
D-Glucarate (2)

Study type

RNA-seq of coding RNA (4)
RNA-seq of non coding RNA (2)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (8)
2025 (6)
2024 (6)
2023 (6)
2015 (4)
2013 (3)
2020 (2)
2019 (2)
2009 (1)
2018 (1)
2017 (1)
2016 (1)
2002 (1)

Lab affiliation

Department of Radiobiology, Beijing Key Laboratory for Radiobiology, Beijing Institute of Radiation Medicine, Beijing 100850, PR China. (1)
Fudan University (1)
Sun Yat-sen University (1)
The First Affiliated Hospital of Sun Yat-sen University (1)

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Efficacy of Fufang E'jiao Jiang in the Treatment of Patients with Qi and Blood Deficiency Syndrome: A Real-World Prospective Multicenter Study with a Patient Registry.

Not available

S-EPMC9918352 | biostudies-literature

Transcriptomics and metabolomics of engineered Synechococcus elongatus during photomixotrophic growth

BACKGROUND: Converting carbon dioxide (CO2) into value-added chemicals using engineered cyanobacteria is a promising strategy to tackle the global warming and energy shortage issues. However, most cyanobacteria are autotrophic and use CO2 as a sole carbon source, which makes it h...

2022-03-21 | MTBLS2825 | MetaboLights

Proteomics analysis LC-MS/MS of human bladder cancer cells

A total of 6,526 proteins were identified in this study, of which 5880 proteins contained quantitative information. 1.2 times as the threshold of differential expression change, and statistical test t-test p-value<0.05 as the threshold of significance, among the quantified proteins, the expression...

ORGANISM(S): Homo sapiens (Human)

2022-02-17 | PXD026559 | Pride

Gut microbiota ameliorates hepatic fibrosis through modulating intestinal bile acid metabolism and hepatocyte pyroptosis (Hepatic fibrosis serum+feces)

Parabacteroides distasonis (P. distasonis) plays an important role in human health, including diabetes, colorectal cancer and inflammatory bowel disease. Here, we show that P. distasonis is decreased in patients with hepatic fibrosis, and that administration of P. dista...

2023-03-17 | MTBLS6728 | MetaboLights

Gut microbiota ameliorates hepatic fibrosis through modulating intestinal bile acid metabolism and hepatocyte pyroptosis (Hepatic fibrosis feces)

Hepatic fibrosis decreased feces bile acid level. Hepatic fibrosis increased serum bile acid. This result showed that hepatic fibrosis inhibited the excretion of bile acid in clinical patients. This result provided phenotype for hepatic fibrosis patients. Bile acid was important indexes for liver...

2023-03-17 | MTBLS6742 | MetaboLights

Transcriptomic and metabolomic analyses reveal the differential accumulation of phenylpropanoids and terpenoids in hemp autotetraploid and its diploid progenitor

Background

Cannabis sativa, a dioecious plant that has been cultivated worldwide for thousands of years, is known for its secondary metabolites, especially cannabinoids, which possess several medicinal effects. In this study, we investigated the autopolyploidization effects on the biosynthes...

2023-09-21 | MTBLS6032 | MetaboLights

Genome-wide comparison of DNA hydroxymethylation in mouse embryonic stem cells and neural progenitor cells by relative quantitative hMeDIP-seq

DNA hydroxymethylation (5hmC) represents a new layer of epigenetic regulation in addition to DNA methylation (5mC). The genome-wide patterns of 5hmC distribution in many tissues and cells have recently been revealed by hydroxymethylated DNA immunoprecipitation (hMeDIP) followed by high throughput se...

ORGANISM(S): Mus musculus

2013-03-08 | E-GEOD-40810 | biostudies-arrayexpress

Gut microbiota ameliorates hepatic fibrosis through modulating intestinal bile acid metabolism and hepatocyte pyroptosis (Hepatic fibrosis serum)

2023-03-17 | MTBLS6732 | MetaboLights

Human Cell 293T BCAT1 IP GC-LC-MS

To identify the potential interaction protein that interacts with BCAT1 by IP-MS, we established the stable cell line with vector and BCAT1 in AGS. Then ten million cells were collected lysed in ice-cold 0.1% NP-40 buffer (50 mM Na2HPO4, pH 7.5, 150 mM NaCl) with protease inhibitors cocktail (Sigma,...