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TranscriptomicsTranscription profiling of mouse adult colon cells treated with probiotic Lactobacillus GG
YAMC (young adult mouse colon) cells are a conditionally immortalized mouse colonic intestinal epithelial cell line derived from the Immortimouse.Prior to each experiment, cells were plated at a density of 7.5 x 105 cells per p100mm dish.Cells were treated with LGG (the probiotic Lactobacillus GG ) ...
ORGANISM(S): Mus musculus 
2008-06-12 | E-GEOD-1940 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling of human neural progenitor cells and neurons with DISC1 interruption
Purpose: Genetic and clinical association studies have identified disrupted-in-schizophrenia 1 (DISC1) as a candidate risk gene for major mental illness. DISC1 is interrupted by a balanced chr(1;11) translocation in a Scottish family, in which the translocation predisposes to psychiatric disorders. ...
ORGANISM(S): Homo sapiens 
2015-09-14 | E-GEOD-71289 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of mouse embryonic stem cell differentiation following treatment with DKK1
Assessed effect of DKK1 treatment on gene expression during the first four days of ES cell differentiation in serum containing medium.
ORGANISM(S): Mus musculus 
2006-12-31 | E-MEXP-759 | biostudies-arrayexpress
TranscriptomicsmRNA profiling of glucose-repressed 14-3-3 and hdac yeast mutants
Previous results suggest that Bmh might inhibit the activity of the transcription factor Adr1 after binding to Adr1-dependent promoters. In a strain lacking the two major histone deacetylases, Hda1 and Rpd3 (hdac?), Adr1 is bound to its target promoters recruiting what appears to be an inactive RNA ...
ORGANISM(S): Saccharomyces cerevisiae 
2013-01-15 | E-GEOD-40116 | biostudies-arrayexpress
TranscriptomicsHigh-through put translational in vivo and ex vivo techniques for glioma molecular characterization and accurate classification, prognosis and treatment selection subset data from etumour consorteum Kal1
Tumour expression profiling was performed on resected brain tumour tissue following its histological categorisation. Classification of tumour type was carried out according to WHO criteria by a panel of independent pathologists across the etumour consorteum. This gave a high quality diagnostic eva...
ORGANISM(S): Homo sapiens 
2013-10-01 | E-MTAB-1852 | biostudies-arrayexpress
TranscriptomicsDicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [RT-PCR]
MicroRNAs (miRNAs) are small, endogenous, non-protein coding RNAs that are an important means of post-transcriptional gene regulation. Deletion of Dicer, a key miRNA processing enzyme, is embryonic lethal in mice, and tissue-specific Dicer deletion results in developmental defects. Using a condition...
ORGANISM(S): Mus musculus 
2013-05-01 | E-GEOD-45810 | biostudies-arrayexpress
UnknownAn immunohistochemical atlas of necroptotic pathway expression.
Not available
S-EPMC11250867 | biostudies-literature
TranscriptomicsGene expression in natural subyearling fall Chinook salmon in the Snake and Clearwater Rivers
We used gene expression accompanied by physical characteristics and gill Na+/K+-ATPase activity to analyze physiological differences associated with two life history variations of juvenile fall Chinook Salmon in the Snake River basin. Subyearlings originating in the Snake River typically migrate sea...
ORGANISM(S): Oncorhynchus tshawytscha 
2014-06-20 | E-GEOD-58670 | biostudies-arrayexpress
Genomicsena-DATASET-dkfz_b062-21-02-2018-14:40:33:479-591 - samples
This dataset contains whole exome sequencing data from 24 patients. The Agilent SureSelect Human All Exon 50-Mb target enrichment kit was used to capture all human exons for deep sequencing. For each patient a tumour and control sample has been sequenced on a Illumina HiSeq2000 instrument in paired-...
EGAD00001003973 | EGA
TranscriptomicsDicer deficiency reveals microRNAs predicted to control gene expression in developing adrenal cortex [array]
MicroRNAs (miRNAs) are small, endogenous, non-protein coding RNAs that are an important means of post-transcriptional gene regulation. Deletion of Dicer, a key miRNA processing enzyme, is embryonic lethal in mice, and tissue-specific Dicer deletion results in developmental defects. Using a condition...
ORGANISM(S): Mus musculus 
2013-05-01 | E-GEOD-45592 | biostudies-arrayexpress
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