Yu Jiao J - OmicsDI

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Unknown (2731)
Proteomics (60)
Metabolomics (7)
Transcriptomics (3)
Genomics (2)

Organisms

Homo sapiens (28)
Mus musculus (21)
Arabidopsis thaliana (2)
Escherichia coli (2)
Azumapecten farreri (2)
Rattus norvegicus (2)
Glycine max (1)
Macaca fascicularis fascicularis (1)
Mus sp. (1)
Ovis aries (1)
Rattus rattus (1)
Spodoptera frugiperda (1)
Artemisia annua (1)
Bacteria (1)
Chlamydomonas reinhardtii (1)
Danio rerio (1)
Synechococcus sp. YX04-3 (1)
Zea mays (1)

Repository

pride (37)
iProX (22)
MetaboLights (7)
biostudies-arrayexpress (3)
EGA (2)
MassIVE (1)

Tissue

Brain (9)
Blood (4)
Cell culture (4)
Lung (3)
Byssus (2)
Heart (2)
Liver (2)
Bone marrow (1)
Breast cancer cell (1)
Erythrocyte (1)
Esophagus (1)
Flower bud (1)
Kidney (1)
Leaf (1)
Lymph node (1)
Plant cell (1)
Primary cell (1)
Seed (1)
Spleen (1)
Synovia (1)

Disease

Alzheimer's disease (2)
Disease (2)
Acute leukemia (1)
Malaria (1)

Technology Type

Mass Spectrometry (37)
Shotgun proteomics (18)
Data-independent acquisition (6)
Mass spectrometry (5)
Data-dependent acquisition (4)
Bottom-up proteomics (3)
Gel-based experiment (3)
Mass spectrometry assay (2)
Affinity purification coupled with mass spectrometry proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Proteogenomics (1)
SRM/MRM (1)
SWATH MS (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
6540 Q-TOF LC/MS (Agilent) (2)
Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
Q Exactive (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2025 (12)
2024 (12)
2022 (12)
2026 (11)
2020 (9)
2023 (5)
2016 (3)
2018 (2)
2015 (1)
2014 (1)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:15682 (2)
CHEBI:17154 (2)
CHEBI:17620 (2)
CHEBI:81321 (2)
CHEBI:9047 (2)
CHEBI:10043 (1)
CHEBI:131738 (1)
CHEBI:131739 (1)
CHEBI:131740 (1)
CHEBI:131741 (1)
CHEBI:131742 (1)
CHEBI:131743 (1)
CHEBI:131744 (1)
CHEBI:131745 (1)
CHEBI:131749 (1)
CHEBI:131750 (1)
CHEBI:131754 (1)
CHEBI:131755 (1)
CHEBI:131757 (1)
CHEBI:131758 (1)
CHEBI:131760 (1)
CHEBI:131761 (1)
CHEBI:131762 (1)
CHEBI:131768 (1)
CHEBI:131769 (1)
CHEBI:131773 (1)
CHEBI:131774 (1)
CHEBI:131775 (1)
CHEBI:131776 (1)
CHEBI:131777 (1)

Metabolite Name

11Z-Eicosenoic acid (2)
12-Ketodeoxycholic acid (2)
2-Isopropylmalic acid (2)
6-Hydroxynicotinic acid (2)
Adenine (2)
Adrenic acid (2)
D-4'-Phosphopantothenate (2)
Gluconolactone (2)
Maltotriose (2)
N-Acetylneuraminic acid (2)
Succinyladenosine (2)
Taurocholic acid (2)
Uridine (2)
(-)-(E)-1-(4-Hydroxyphenyl)-7-phenyl-6-hepten-3-ol (1)
(10E,12Z)-(9S)-9-Hydroperoxyoctadeca-10,12-dienoic acid (1)
(1R)-5-[2-[(1S,7As)-1-[(1S)-1-(3-hydroxy-3-methylbutoxy)ethyl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylidenecyclohexane-1,3-diol (1)
(23S,24S)-17,23-Epoxy-24,29-dihydroxy-27-norlanost-8-ene-3,15-dione (1)
(23S,25R)-12alpha,17alpha,23-trihydroxyspirost-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1-2)-beta-D-glucopyranoside (1)
(2E,4E)-5-[2-Methyl-2-(1,1,4,4-tetramethyl-1,2,3,4-tetrahydronaphthalene-6-yl)cyclopropyl]-3-methyl-2,4-pentadienoic acid (1)
(2R,3S)-1-[(7-Methyl-2,3-dihydro-1H-inden-4-yl)oxy]-3-(propan-2-ylamino)butan-2-ol (1)
(2S,3R,4R)-2-Amino-3,4-dihydroxy-2-(hydroxymethyl)-14-oxoicos-6-enoic acid (1)
(2s)-5-Oxopyrrolidine-2-carbaldehyde (1)
(2xi,6xi)-7-Methyl-3-methylene-1,2,6,7-octanetetrol (1)
(3R,3'R,6'R,9-cis)-beta,epsilon-Carotene-3,3'-diol (1)
(3R,4S)-(6S,7R)-Diepoxy-9Z-heneicosene (1)
(3S,6E,10E)-1,6,10,14-Phytatetraen-3-ol (1)
(3beta,17alpha,23R)-17,23-Epoxy-3,29-dihydroxy-27-norlanost-8-ene-15,24-dione (1)
(3beta,23xi)-3,23-Dihydroxycycloart-24-en-26-oic acid (1)
(4-Methylphenyl)acetaldehyde (1)
(5Z,14Z,17Z)-Henicosa-5,14,17-trienoylcarnitine (1)

Study type

RNA-seq of coding RNA (2)
Transcription profiling by array (1)

Release Date

2025 (443)
2022 (402)
2024 (359)
2023 (342)
2021 (322)
2020 (200)
2019 (127)
2018 (109)
2017 (103)
2016 (74)
2026 (68)
2015 (67)
2014 (48)
2013 (22)
2012 (15)
2011 (12)
2010 (6)
2009 (6)
2008 (2)
2007 (2)
2006 (1)
2005 (1)
2004 (1)
2000 (1)
1999 (1)

Lab affiliation

Tsinghua University, China (4)
Department of Structural Biology and Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (2)
Guangdong Pharmaceutical University (2)
Key Laboratory of Molecular Epigenetics of Ministry of Education (MOE), Northeast Normal University, Changchun, China. (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
Shanghai Jiao Tong University School of Medicine (2)
St. Jude Children's Research Hospital (2)
The Fifth Affiliated Hospital of Guangzhou Medical University (2)
College of Marine Life Sciences, Ocean University of China, Qingdao, China (1)
Department of Biochemistry and Molecular Cell Biology, Key Laboratory of Cell Differentiation and Apoptosis of Chinese Ministry of Education, Shanghai Key Laboratory for Tumor Microenvironment and Inflammation, Shanghai Jiao Tong University School of Medicine, Shanghai, China (1)
Department of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200127, P.R. China. (1)
Department of Physiology & Biophysics University of California, Irvine (1)
Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA (1)
Institute of Interdisciplinary Medicine, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China (1)
Joint International Research Laboratory of Metabolic & Developmental Sciences, Key Laboratory of Urban Agriculture (South) Ministry of Agriculture, Plant Biotechnology Research Center, Fudan-SJTU-Nottingham Plant Biotechnology R&D Center, School of Agriculture and Biology, Shanghai Jiao Tong University, 800 Dongchuan Road, Shanghai 200240, P. R. China (1)
Ocean University of China (1)
Shanghai Center for Systems Biomedicine, Shanghai Jiao Tong University, Shanghai, China. (1)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (1)
Shanghai Jiao Tong University (1)
Shanghai Jiao Tong University Ming Yu Lab (1)
Shanghai Sixth People’s Hospital Affiliated to Shanghai Jiao Tong University School of Medicine, Shanghai, China. (1)
St Jude Children's Research Hospital (1)
St. Jude Children’s Research Hospital (1)
State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China (1)
Structural Biology Department, St. Jude Children's Research Hospital, Memphis, TN, USA (1)
Xiamen University (1)
harbin medical university (1)

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Steam-exploded okara ameliorates hepatic lipid metabolism in high-fat diet-induced obese C57BL/6J mice: Evidence from multi-omics characterization

Okara, a byproduct of soybean processing, possesses valuable nutritional and physiological properties. Steam explosion, an efficient physical modification technique, can increase the soluble dietary fiber (SDF) content in okara and potentially amplify its health benefits, such as anti-obesity eff...

2025-10-23 | MTBLS13154 | MetaboLights

Effects of continuous positive airway pressure on neurocognitive architecture and function in patients with obstructive sleep apnoea: study protocol for a multicentre randomised controlled trial.

Not available

S-EPMC5729992 | biostudies-literature

Identification of AF9-associated proteins by IP and mass spectrometry

To assess whether these proteins directly interact with each other in cells, we performed large-scale co-immunoprecipitation (co-IP) experiments using nuclear extract of HEL cells and the AF9 antibody against the N-terminus of AF9, and analyzed immunoprecipitated proteins by mass spectrometry. We id...

ORGANISM(S): Homo sapiens (Human)

2024-10-17 | PXD042008 | Pride

Recent deterioration of coral reefs in the South China Sea due to multiple disturbances.

Not available

S-EPMC9332401 | biostudies-literature

IL-1Ra protects hematopoietic cells from chemotoxicity through p53-induced quiescence.

Not available

S-EPMC6902709 | biostudies-literature

Identification of clinical molecular targets for childhood Burkitt lymphoma.

Not available

S-EPMC7502376 | biostudies-literature

Eutypellaolides A-J, Sesquiterpene diversity expansion of the polar fungus Eutypella sp. D-1.

Not available

S-EPMC10850561 | biostudies-literature

Food withdrawal alters the gut microbiota and metabolome in mice.

Not available

S-EPMC9292403 | biostudies-literature

Study design of the DAS-OLT trial: a randomized controlled trial to evaluate the impact of dexmedetomidine on early allograft dysfunction following liver transplantation.

Not available

S-EPMC7317895 | biostudies-literature

systematic proteomic of 20 cases of primary ESCC tumor tissue (T), matched normal tissue (N) and lymph node metastatic tissue (LN)

To obtain the global landscape of Khib in ESCC metastasis, 20 cases of primary ESCC tumor tissue (T), matched normal tissue (N) and lymph node metastatic tissue (LN) were subjected to systematic proteomic.

ORGANISM(S): Homo sapiens (Human)

2026-06-29 | PXD037295 | Pride

Proteomics Cancer metastasis

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