Yu You Y - OmicsDI

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Unknown (614)
Proteomics (18)
Transcriptomics (11)
Metabolomics (5)
Models (1)
Genomics (1)

Organisms

Homo sapiens (14)
Mycobacterium tuberculosis SP7 (8)
Mycobacterium tuberculosis SP10 (8)
Mycobacterium tuberculosis SP13 (8)
Mycobacterium tuberculosis SP22 (8)
Chlamydomonas reinhardtii (8)
Enterococcus mundtii CRL35 (8)
Oncorhynchus tshawytscha (8)
Pseudomonas canadensis (8)
Pseudomonas aeruginosa PAO1H2O (8)
Human alphaherpesvirus 1 strain 17 (8)
Mycobacterium tuberculosis SP1 (8)
Marchantia polymorpha subsp. ruderalis (8)
Methylocystis sp. (8)
Exiguobacterium sp. SH31 (8)
Palaemonetes sp. common grass shrimp associated circular virus (8)
Amaranthus tricolor (8)
Spirochaeta sp. ELBA (8)
Clavibacter nebraskensis NCPPB 2581 (8)
Porites pukoensis (8)
Porphyromonas gingivalis (8)
Leishmania tarentolae (8)
Porphyromonas gingivalis W83 (8)
Human betaherpesvirus 5 (8)
Bothrops insularis (8)
Bothrops jararaca (8)
Mus musculus (6)
Bombyx mori (1)
Pseudomonas aeruginosa PAO1 (1)
Triticum aestivum (1)

Repository

biostudies-arrayexpress (11)
iProX (10)
pride (8)
MetaboLights (5)
BioModels (1)
EGA (1)

Tissue

Plant cell (2)
Trophoblast cell (1)
Placenta (1)
Seed (1)
Macrophage (1)
Leaf (1)
Primary cell (1)
Cell culture (1)

Disease

S enteritidis (1)
Ovarian cancer (1)
Pre-eclampsia (1)
Obesity (1)

Technology Type

Mass Spectrometry (8)
Mass spectrometry (5)
Shotgun proteomics (4)
Data-dependent acquisition (2)
Top-down proteomics (1)
Bottom-up proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (3)
Liquid Chromatography MS - positive - reverse phase (2)
Other (1)
Scanning hardware (1)
Liquid Chromatography MS - alternating – hilic (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2024 (6)
2026 (4)
2021 (4)
2022 (3)
2011 (2)
2010 (2)
2007 (2)
2025 (2)
2023 (2)
2005 (1)
2014 (1)
2013 (1)
2012 (1)
2008 (1)
2006 (1)
2020 (1)

CHEBI ID

CHEBI:89929 (3)
CHEBI:42504 (3)
CHEBI:16196 (3)
CHEBI:18300 (3)
CHEBI:64399 (3)
CHEBI:18089 (3)
CHEBI:17687 (3)
CHEBI:28865 (3)
CHEBI:16359 (3)
CHEBI:17964 (3)
CHEBI:16865 (3)
CHEBI:32816 (3)
CHEBI:15741 (3)
CHEBI:16919 (3)
CHEBI:79097 (2)
CHEBI:166498 (2)
CHEBI:68946 (2)
CHEBI:137332 (2)
CHEBI:89680 (2)
CHEBI:89506 (2)
CHEBI:89926 (2)
CHEBI:36707 (2)
CHEBI:145258 (2)
CHEBI:89233 (2)
CHEBI:75304 (2)
CHEBI:131887 (2)
CHEBI:5445 (2)
CHEBI:35465 (2)
CHEBI:16796 (2)
CHEBI:145277 (2)

Metabolite Name

N-Methylnicotinamide (3)
Pipecolic acid (3)
Trimethylaminoacetone (2)
SM(d17:1/24:1(15Z)) (2)
SM(d16:1/24:1(15Z)) (2)
PC(18:1(11Z)/14:0) (2)
LysoPE(16:0/0:0) (2)
Trans-Hexadec-2-enoyl carnitine (2)
3-Dehydroxycarnitine (2)
Stearoyl sphingomyelin (2)
SM(d18:1/18:1(9Z)) (2)
PC(20:4(8Z,11Z,14Z,17Z)/15:0) (2)
PC(P-18:1(9Z)/16:1(9Z)) (2)
N-Palmitoylsphingosine (2)
SM(d18:1/20:0) (2)
LysoPC(14:0/0:0) (2)
SM(d18:1/14:0) (2)
N-Acetylglutamine (2)
LysoPC(16:1(9Z)/0:0) (2)
PC(P-18:1(11Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (2)
LysoPE(0:0/18:3(6Z,9Z,12Z)) (2)
Trimethylamine N-oxide (2)
Chenodeoxycholic acid (2)
Norvaline (2)
Rhamnose (2)
Gamma-Aminobutyric acid (2)
Carnosine (2)
Alpha-dimorphecolic acid (2)
5'-Methylthioadenosine (2)
DL-2-Aminooctanoic acid (2)

IsPrivate

False (1)

Modelling Approach

Ordinary differential equation model (1)

Study type

Transcription profiling by array (5)
RNA-seq of coding RNA (3)
RNA-seq of non coding RNA (2)
Comparative genomic hybridization by array (1)

Release Date

2025 (99)
2024 (86)
2023 (82)
2022 (77)
2021 (69)
2020 (44)
2019 (38)
2016 (28)
2018 (24)
2017 (20)
2014 (12)
2026 (12)
2015 (11)
2013 (5)
2012 (4)
2011 (3)
2008 (3)
2010 (2)
2007 (2)
2009 (2)
2006 (1)
2004 (1)

Lab affiliation

School of Life Sciences, Hubei University, Wuhan 430062, China (1)
School of Life Sciences, Hubei University, Wuhan, China (1)
Royal Women's Hospital (1)
Department of Pharmacology, Tianjin Key Laboratory of Inflammatory Biology, The Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Key Laboratory of Experimental Hematology, School of Basic Medical Sciences, Tianjin Medical University, Tianjin, China. (1)
Sichuan Agricultural University (1)
School of Life Sciences, Fudan University, China (1)
School of Life Sciences, Fudan University, China. (1)
Lanzhou University, Lanzhou, Gansu, China (1)

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Complete Genome Sequence of Tissierella sp. Strain Yu-01, Isolated from the Feces of the Black Soldier Fly.

Not available

S-EPMC10281155 | biostudies-literature

Lrp5 and Lrp6 are required for maintaining self-renewal and differentiation of hematopoietic stem cells.

Not available

S-EPMC6988868 | biostudies-literature

A new freshwater species Achnanthidiumkangdingnese (Bacillariophyta, Achnanthidiaceae) from Sichuan Province, China.

Not available

S-EPMC9848883 | biostudies-literature

Hyocholic acid species as novel biomarkers for metabolic disorders

Hyocholic acid (HCA) is a major bile acid (BA) species in the BA pool of pigs, a species known for its exceptional resistance to spontaneous development of diabetic phenotypes. HCA and its derivatives are also present in human blood and urine. We investigate whether human HCA profiles can predict th...

2021-10-06 | MTBLS2343 | MetaboLights

Microglial NLRP3 inflammasome activation mediates IL-1β release and contributes to central sensitization in a recurrent nitroglycerin-induced migraine model.

Not available

S-EPMC6456991 | biostudies-literature

MicroRNA expression profiling of the fifth-instar posterior silk gland of Bombyx mori

Background: The growth and development of the posterior silk gland and the biosynthesis of the silk core protein at the fifth larval instar stage of Bombyx mori are of paramount importance for silk production. Results: Here, aided by next-generation sequencing and microarry assay, we profile 1,229 m...

ORGANISM(S): Bombyx mori

2014-07-30 | E-GEOD-56380 | biostudies-arrayexpress

SERS based Y-shaped aptasensor for early diagnosis of acute kidney injury.

Not available

S-EPMC9135001 | biostudies-literature

Angiotensin-converting enzyme 2 activator diminazene aceturate prevents lipopolysaccharide-induced inflammation by inhibiting MAPK and NF-κB pathways in human retinal pigment epithelium.

Not available

S-EPMC4748536 | biostudies-literature

Stromal miR-200s contribute to breast cancer cell invasion through CAF activation and ECM remodeling.

Not available

S-EPMC4815985 | biostudies-literature

Transcriptomic and proteomic profiles of II YOU 838 (Oryza sativa) provide insights into heat stress tolerance in hybrid rice.