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UnknownNutrient-Driven O-GlcNAcylation at Promoters Impacts Genome-Wide RNA Pol II Distribution.
Not available
S-EPMC6139338 | biostudies-literature
ProteomicsOryza sativa,Global proteome,LC-MSMS
Rice is one of the most important global food crops, and is also a model organism for cereal research 31 . Complete genome sequencing of rice, together with advances in transcriptomics and proteomics, has had a dramatic impact on plant growth and 5 breeding programs 32 . Genomic analysis of DNA meth...
ORGANISM(S): Oryza sativa (Rice) 
2017-11-13 | PXD004870 | Pride
Acetylome Oryza sativa Lysine acetylation Calvin cycle. Photosynthesis Global proteomics 
UnknownBis[bis-(1-ethyl-benzimidazol-2-ylmeth-yl) ether]cobalt(II) dipicrate dimethyl-formamide disolvate.
Not available
S-EPMC2970309 | biostudies-literature
GenomicsCross-species comparison of C/EBPα and PPARγ profiles in mouse and human adipocytes reveals interdependent retention of binding sites
We used chromatin immunoprecipitation combined with deep sequencing to map all binding sites of C/EBPα and PPARγ in human SGBS adipocytes and compared these with the genome-wide profiles from mouse 3T3-L1 adipocytes to systematically investigate what biological features correlate with retention of s...
ORGANISM(S): Homo sapiens 
2011-02-23 | E-GEOD-27450 | biostudies-arrayexpress
UnknownBis[1,3-bis-(benzimidazol-2-yl)-2-oxa-propane]cobalt(II) dipicrate acetonitrile tris-olvate.
Not available
S-EPMC2977374 | biostudies-literature
TranscriptomicsTranscriptomic characterization of a virulence-deficient phosphatidylcholine-negative Agrobacterium tumefaciens mutant
To learn more about the global effects of phosphatidylcholine (PC)-deficiency in A. tumefaciens, we performed transcriptomic studies comparing the wild type and a PC-deficient DpmtA Dpcs mutant. We expanded the number of affected virulence genes and showed that the loss of PC was correlated with alt...
ORGANISM(S): Agrobacterium tumefaciens str. C58 
2010-04-07 | E-GEOD-21223 | biostudies-arrayexpress
UnknownIdentification of α-Amyrin 28-Carboxylase and Glycosyltransferase From Ilex asprella and Production of Ursolic Acid 28-O-β-D-Glucopyranoside in Engineered Yeast.
Not available
S-EPMC7251064 | biostudies-literature
UnknownCharacterizing the plasma protein binding profiles of chemistry diversified antisense oligonucleotides in human and mouse plasma using an ultrafiltration method.
Not available
S-EPMC11795045 | biostudies-literature
TranscriptomicsChip-chip of Sir3 and of Sir2, and ChAP-chip of AAR from budding yeast cells
O-acetyl-ADP-ribose (AAR) is a small metabolic molecule that is generated during NAD-dependent deacetylation by Sir2. Sir2 regulates gene expression, DNA repair, and genome stability. chromatin affinity-precipitation (ChAP) method was used to detect the chromatin fragments at which small molecules i...
ORGANISM(S): Saccharomyces cerevisiae 
2015-12-31 | E-GEOD-65672 | biostudies-arrayexpress
TranscriptomicsRole of Cryptococcus neoformans Sre1-pathway in low oxygen gene expression
Comparison of wild-type serotype A C. neoformans cells grown at 21% and 3% oxygen for 2 hours in rich medium. Also comparison of wild-type and Sre1-pathway mutant strains grown at 3 % oxygen for 2 hours in rich medium. Two-condition experiment. Each comparison was performed in two biological replic...
ORGANISM(S): Filobasidiella neoformans 
2010-05-22 | E-GEOD-18282 | biostudies-arrayexpress
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