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Unknown (140)
Proteomics (138)
Transcriptomics (16)
Genomics (7)
Metabolomics (2)
Other (1)

Organisms

Allexis (138)
Arabidopsis thaliana (138)
Entamoeba histolytica HM-1:IMSS-A (138)
Escherichia coli (138)
Homo sapiens (138)
Listeria monocytogenes (138)
Medicago truncatula (138)
Mus musculus (138)
Rattus norvegicus (138)
Saccharomyces cerevisiae (138)
Schizosaccharomyces pombe (138)
Shigella (138)
Shigella flexneri (138)
Sinorhizobium meliloti BL225C (138)
Solanum tuberosum (138)
Staphylococcus aureus (138)
Sus scrofa domesticus (138)
Cyanophora paradoxa (137)
Ensifer adhaerens (137)
Histomonas meleagridis (137)
Leishmania major strain Friedlin (137)
Methylohalobius crimeensis 10Ki (137)
Mycobacterium tuberculosis (137)
Mus musculus (5)
Drosophila melanogaster (4)
Homo sapiens (4)
Bos taurus (2)
Equus caballus (1)
Arabidopsis thaliana (1)
Danio rerio (1)

Organisms

Homo sapiens (3)
Danio rerio (1)
Bos taurus (1)
Mus musculus (1)

Repository

pride (138)
biostudies-arrayexpress (12)
geo (6)
ENA (6)
MetaboLights (2)

Tissue

Cell culture (30)
Plant cell (22)
Liver (9)
Epithelial cell (7)
Hepatocyte (7)
Blood plasma (5)
Brain (4)
Heart (4)
Macrophage (4)
Adrenal gland (2)
B cell (2)
Blood (2)
Blood cell (2)
Brain microvascular endothelial cell (2)
Cell suspension culture (2)
Colon (2)
Embryo (2)
Leaf (2)
Pancreatic islet (2)
Permanent cell line cell (2)
Whole body (2)
Abdominal aorta (1)
Adrenal cortex (1)
Aortic smooth muscle cell (1)
Aortic valve (1)
Blood platelet (1)
Blood serum (1)
Bone marrow (1)
HeLa cell (1)
T cell (1)

Disease

Cardiovascular system disease (4)
Prostate adenocarcinoma (3)
Acute leukemia (2)
Bacterial meningitis (2)
Breast cancer (2)
Disease free (2)
Type 1 diabetes mellitus (2)
Progressive skeletal muscle myopathy (1)
Abdominal aortic aneurysm (1)
Alpha 1-antitrypsin deficiency (1)
Alzheimer's disease (1)
Bacterial sepsis (1)
Brain cancer (1)
Brain glioblastoma multiforme (1)
Cervix carcinoma (1)
Colitis (1)
Colon cancer (1)
Complex partial epilepsy (1)
Head and neck squamous cell carcinoma (1)
Heart disease (1)
Hepatocellular carcinoma (1)
Liver disease (1)
Lung adenocarcinoma (1)
Lymphoma (1)
Neck carcinoma (1)
Neuroblastoma (1)
Non-small cell lung carcinoma (1)
Obesity (1)
Pertussis (1)
Plasmodium falciparum malaria (1)

Technology Type

Mass Spectrometry (138)
Shotgun proteomics (79)
Bottom-up proteomics (28)
Affinity purification coupled with mass spectrometry proteomics (24)
Data-dependent acquisition (22)
Data-independent acquisition (12)
SWATH MS (6)
Top-down proteomics (5)
Affinity proteomics (4)
Gel-based experiment (3)
Mass spectrometry (2)
DiaPASEF (2)
Glycoproteomics (2)
SRM/MRM (2)

Instrument Platform

Flexercell FX-4000C (1)
AB SOLiD System (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse phase (1)

Publication Date

2023 (23)
2025 (21)
2026 (17)
2022 (17)
2024 (15)
2019 (13)
2020 (11)
2021 (10)
2017 (7)
2018 (6)
2016 (4)
2014 (3)
2012 (3)
2013 (2)
2010 (2)
2006 (2)
2009 (1)
2015 (1)

CHEBI ID

CHEBI:189567 (1)
CHEBI:189566 (1)
CHEBI:189565 (1)
CHEBI:189564 (1)
CHEBI:189571 (1)
CHEBI:189568 (1)
CHEBI:165589 (1)
CHEBI:165721 (1)
CHEBI:171952 (1)
CHEBI:186693 (1)
CHEBI:34719 (1)
CHEBI:189570 (1)
CHEBI:189569 (1)
CHEBI:71052 (1)
CHEBI:55381 (1)
CHEBI:46961 (1)
CHEBI:28123 (1)

Metabolite Name

2-(6-hydroxy-6-methyloctyl)-2H-furan-5-one (1)
[3-[2-aminoethoxy(hydroxy)phosphoryl]oxy-2-[(4Z,7Z)-octadeca-4,7-dienoyl]oxypropyl] octadecanoate (1)
PS(O-18:0/12:0) (1)
PS(P-18:0/12:0) (1)
2-(1-Methylpropyl)-4,6-dinitrophenol (1)
PI-Cer(t18:0/20:0(2OH)) (1)
N-methylundec-10-enamide (1)
PS(O-16:0/12:0) (1)
PS(16:1(9Z)/16:0) (1)
PE(16:1(9Z)/18:1(11Z)) (1)
PE(16:0/18:2(9Z,12Z)) (1)
PE(14:1(9Z)/18:0) (1)
Pentadecanoyl-EA (1)
Polyoxyethylene dioleate (1)
PE(18:1(9Z)/16:0) (1)
Diacetone alcohol (1)
C17 Sphinganine (1)
C16 Sphinganine (1)
2,4,7-tridecatrienal (1)
Montecristin (1)
1,3-Diisopropylbenzene (1)
2-Methyl-1,3-cyclohexadiene (1)
Pelargonic acid (1)
Gamma-Linolenic acid (1)
Eicosadienoic acid (1)
Betaine (1)
Diethanolamine (1)
Phytosphingosine (1)

First Public Date

2022 (3)
2026 (1)
2023 (1)
2014 (1)

Modification

4x(2)H labeled dimethylated residue (1)
N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (8)
Unknown experiment type (1)
ChIP-seq (1)
Methylation profiling by array (1)
RNA-seq of non coding RNA (1)

Release Date

2023 (13)
2019 (12)
2014 (11)
2010 (11)
2015 (10)
2022 (10)
2025 (9)
2017 (9)
2012 (8)
2021 (8)
2018 (8)
2013 (7)
2024 (6)
2020 (6)
2011 (4)
2009 (4)
2016 (4)
2006 (3)
2007 (3)
2008 (2)
2001 (2)
2005 (1)
2000 (1)

Lab affiliation

Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (22)
Head of Proteomics (4)
Biological Sciences Division, Pacific Northwest National Laboratory (2)
Brigham and Women's Hospital, Harvard Medical School (2)
Fudan University (2)
Head of Proteomics, Group leader (2)
Maria Sklodowska-Curie National Research Institute of Oncology, Gliwice Branch (2)
School of Natural Sciences, Macquarie University, Sydney, Australia (2)
State Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, Hubei, China (2)
1. St. Anna Children’s Cancer Research Institute (CCRI), Vienna, Austria 2. CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria 3. Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases, Vienna, Austria 4. Medical University of Vienna, Department of Pediatrics and Adolescent Medicine, Vienna, Austria 5. St. Anna Children’s Hospital, Medical University of Vienna, Department of Pediatrics and Adolescent Medicine, Vienna, Austria (1)
1Medical Research Council Metabolic Diseases Unit, Institute of Metabolic Science-Metabolic Research Laboratories, University of Cambridge, Cambridge, United Kingdom (1)
5Faculty of Biology, Technion-Israel Institute of Technology, Haifa-3200003, Israel. (1)
AMU, CNRS, INSERM, Institut Paoli-Calmettes, CRCM (1)
Amsterdam UMC, Vrije Universiteit Amsterdam, Medical Oncology, Cancer Center Amsterdam, OncoProteomics Laboratory, Amsterdam, Netherlands (1)
Basic Immune System of Plants / Protein Mass Spectrometry Max Planck Institute for Plant Breeding Research Carl-von-Linne-Weg 10, 50829 Cologne, Germany (1)
Boston University (1)
Brigham and Women's Hospital (1)
CAS Key Laboratory of Separation Science for Analytical Chemistry, National Chromatographic R & A Center, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, China. (1)
CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, 1090 Vienna, Austria (1)
Chair of Biochemistry II, Theodor Boveri-Institute, Biocenter, University of Würzburg, Würzburg, Germany (1)
Charité – Universitätsmedizin Berlin (1)
China-UK-NYNU-RRES Joint Laboratory of Insect Biology, Nanyang Normal University (NYNU), Nanyang 473061, Henan, People’s Republic of China (1)
Columbia University Department of Biological Sciences and Department of Chemistry (1)
Copenhagen Center for Glycomics (CCG), Department of Cellular and Molecular Medicine, University of Copenhagen, Denmark (1)
Departamento de Bioquímica e Biologia Molecular, Universidade Federal do Paraná, PR, Brasil. Instituto Oswaldo Cruz, Rio de Janeiro, Brasil (1)
Department of Biochemistry and Molecular and Structural Biology, Jozef Stefan Institute, Jamova cesta 39, 1000 Ljubljana, Slovenia (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY, 10461, USA (1)
Department of Biochemistry, Purdue University, West Lafayette, IN USA (1)
Department of Botany and Plant Pathology, Department of Biological Sciences, Purdue University (1)
Department of Chemistry, Scripps Research (1)