Zhang Cui C - OmicsDI

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Unknown (4956)
Proteomics (120)
Transcriptomics (61)
Metabolomics (31)
Genomics (11)
Multiomics (3)

Organisms

Aerococcus urinae NBRC 15544 = CCUG 36881 (72)
Alteromonadales (72)
Bacteria (72)
Homo sapiens (43)
Mus musculus (36)
Arabidopsis thaliana (8)
Oryza sativa (3)
Caenorhabditis elegans (3)
Severe acute respiratory syndrome coronavirus 2 (3)
Brassica napus (2)
Saccharomyces cerevisiae (2)
Rattus norvegicus (2)
Tardigrada (2)
Clostridioides difficile 630 (1)
Oryza rufipogon (1)
Populus tomentosa (1)
Macaca mulatta (1)
Zea mays (1)
Schizosaccharomyces pombe (1)
Oryza sativa Japonica Group (1)
Gallus gallus (1)
Sus scrofa (1)
Danio rerio (1)
Escherichia coli BL21(DE3) (1)
Gryllinae (1)
Hierodula patellifera (1)
Locusta migratoria (1)
Mus sp. (1)
Periplaneta americana (1)
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (1)

Organisms

Mus musculus (1)

Repository

pride (72)
biostudies-arrayexpress (67)
iProX (45)
MetaboLights (31)
EGA (4)
PeptideAtlas (3)
ENA (1)

Tissue

Cell culture (23)
Leaf (8)
Epithelial cell (6)
Plant cell (6)
Testis (5)
Hepatocyte (4)
Lung (4)
Others (3)
Brain (3)
Liver (3)
Permanent cell line cell (3)
Mycelium (2)
Oocyst (2)
T cell (2)
Adipose tissue (1)
Blood serum (1)
Breast (1)
Embryo (1)
Epithelial cell of lung (1)
HCT-116 cell (1)
Heart (1)
Kidney cell (1)
Muscle (1)
Ovary (1)
Pericyte cell (1)
Placenta (1)
Root (1)
Sperm (1)
Uterine endometrium (1)
Whole body (1)

Disease

Disease free (6)
Breast cancer (2)
Adult hepatocellular carcinoma (1)
Alzheimer's disease (1)
Brain glioblastoma multiforme (1)
Cardiovascular system disease (1)
Colon cancer (1)
Laryngeal squamous cell carcinoma (1)
Non-small cell lung carcinoma (1)
Polycystic Kidney (1)
Prostate adenocarcinoma (1)
Renal cell carcinoma (1)
Severe acute respiratory syndrome (1)
Triple-receptor negative breast cancer (1)

Technology Type

Mass Spectrometry (72)
Shotgun proteomics (39)
Mass spectrometry (26)
Data-dependent acquisition (12)
Affinity purification coupled with mass spectrometry proteomics (9)
Bottom-up proteomics (9)
Mass spectrometry assay (3)
Gel-based experiment (3)
Top-down proteomics (3)
NMR spectroscopy (2)
Data-independent acquisition (2)
SRM/MRM (2)
Illumina HiSeq 2000 (1)
Affinity proteomics (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (10)
Liquid Chromatography MS - positive - reverse phase (9)
Illumina HiSeq 2000 (4)
6540 Q-TOF LC/MS (Agilent) (4)
Liquid Chromatography MS - negative - hilic (4)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
LTQ Orbitrap Elite (2)
Illumina Genome Analyzer (1)
Illumina Genome Analyzer II (1)
Affymetrix Fluidics Station 400 (1)
HiSeq X Ten (1)
NextSeq 500 (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
TSQ Quantum GC (Thermo Scientific) (1)
Liquid Chromatography MS - alternating – hilic (1)
GCMS-QP2010 Plus (Shimadzu) (1)
Gas Chromatography MS - (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Gas Chromatography MS - positive (1)
Nuclear Magnetic Resonance (NMR) (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
Bruker (1)
Exactive (Thermo Scientific) (1)
Nuclear Magnetic Resonance (NMR) - (1)
QExactive (1)

Publication Date

2022 (33)
2025 (28)
2024 (18)
2023 (18)
2021 (16)
2014 (15)
2026 (14)
2013 (11)
2011 (10)
2019 (8)
2016 (8)
2012 (7)
2015 (6)
2020 (5)
2018 (5)
2017 (5)
2010 (4)
2009 (4)
2007 (2)
2008 (1)

UNIPROT ID/AC

A0A024R563 (3)
A0A024R8H9 (3)
A0A024RAN2 (3)
A0A024RC46 (3)
A0A087WUD1 (3)
A0A087WVZ5 (3)
A0A087WWK8 (3)
A0A087WXI0 (3)
A0A087WZE9 (3)
A0A087X1S3 (3)
A0A0A0MR66 (3)
A0A0A0MS51 (3)
A0A0A0MSA7 (3)
A0A0B4J220 (3)
A0A0C4DG89 (3)
A0A0C4DGT3 (3)
A0AV96 (3)
A0AVT1 (3)
A0FGR8 (3)
A0FGR8-2 (3)
A0FGR8-6 (3)
A0JLT2 (3)
A0JNW5 (3)
A0MZ66 (3)
A0PJW6 (3)
A0PK00 (3)
A1A4S6 (3)
A1L0T0 (3)
A1L170 (3)
A1L390 (3)

ENSEMBL ID

ENSG00000147251 (3)
ENSG00000170477 (3)
ENSG00000247315 (3)

CHEBI ID

CHEBI:15756 (11)
CHEBI:30769 (11)
CHEBI:28842 (10)
CHEBI:15741 (10)
CHEBI:17568 (10)
CHEBI:16359 (10)
CHEBI:16704 (10)
CHEBI:17351 (10)
CHEBI:17368 (10)
CHEBI:17992 (9)
CHEBI:17822 (9)
CHEBI:16811 (9)
CHEBI:28044 (9)
CHEBI:16865 (9)
CHEBI:55328 (9)
CHEBI:24813 (9)
CHEBI:16919 (9)
CHEBI:16914 (9)
CHEBI:25094 (8)
CHEBI:16708 (8)
CHEBI:17562 (8)
CHEBI:15428 (8)
CHEBI:28790 (8)
CHEBI:17154 (8)
CHEBI:30763 (8)
CHEBI:16335 (8)
CHEBI:17750 (8)
CHEBI:16015 (8)
CHEBI:32816 (8)
CHEBI:16737 (8)

Metabolite Name

Guanosine (8)
Glycine (7)
Xanthine (7)
Uridine (7)
Creatine (7)
Hypoxanthine (7)
Uracil (6)
Betaine (6)
Citric acid (6)
Adenosine (6)
Riboflavin (6)
L-Glutamate (6)
Glucose (6)
Cytidine (6)
Sucrose (6)
Urea (6)
L-Tyrosine (6)
Glycerol (5)
Succinic acid (5)
Methionine (5)
N-Acetylneuraminic acid (5)
Taurine (5)
Deoxycholic acid (5)
Serine (5)
Urocanic acid (5)
Alanine (5)
Palmitic acid (5)
Thymidine (5)
Creatinine (5)
Glycerophosphocholine (5)

First Public Date

2018 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (28)
RNA-seq of coding RNA (20)
ChIP-seq (6)
Human - High-throughput sequencing (2)
Comparative genomic hybridization by array (2)
Methylation profiling by array (2)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
RNA-seq of total RNA (1)

Release Date

2022 (736)
2025 (722)
2023 (643)
2024 (599)
2021 (543)
2020 (401)
2019 (269)
2018 (202)
2017 (190)
2016 (149)
2015 (142)
2026 (105)
2014 (96)
2013 (69)
2012 (44)
2011 (40)
2010 (26)
2009 (23)
2008 (15)
2007 (6)
2006 (3)

Lab affiliation

Agronomy College/National Key Laboratory of Wheat and Corn Crop/Collaborative Innovation Center of Henan Grain Crops, Henan Agricultural University ,Zhengzhou China (2)
College of Agronomy, Jiangxi Agricultural University (2)
New Cornerstone Science Laboratory, State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China (2)
Shanghai Institute of Thoracic Oncology, Shanghai Chest Hospital, Shanghai Jiao Tong University, Shanghai 200030 (2)
State Key Laboratory of Reproductive Medicine and Offspring Health， Nanjing Medical University, Nanjing, China. (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Agronomy College, Henan Agricultural University, China (1)
Anhui Medical University (1)
Beijing Key Laboratory for Dairy Cow Nutrition, Beijing University of Agriculture (1)
Ben May department of cancer research, The university of Chicago (1)
CAS Center for Excellence in Molecular Plant Science, Chinese Academic on Science (1)
Center for Proteomics and Metabolomics St. Jude Children's Research Hospital (1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Bavaria, Germany (1)
Children's Hospital of Soochow University, Suzhou (1)
China Pharmaceutical University (1)
Chinese Academy of Medical Sciences (CAMS) & Peking Union Medical College (PUMC) (1)
College of Bioscience and Biotechnology, Shenyang Agricultural University, Shenyang 110866, PR China (1)
College of Veterinary Medicine, Henan Agricultural University, International Joint Research Laboratory for Zoonotic Diseases of Henan, Zhengzhou, China (1)
College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, China (1)
College of Veterinary Medicine, Henan Agricultural University, Zhengzhou, China (1)
Department of Anatomy and Neurobiology, Research Center for Sectional and Imaging Anatomy, Shandong Provincial Key Laboratory of Mental Disorder, Shandong Key Laboratory of Digital Human and Clinical Anatomy, School of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University, China (1)
Department of Biochemistry and Molecular Biology Department of Urology, Mayo clinic, Rochester MN, US (1)
Department of Burns and Reconstructive Surgery, Xiangya Hospital, Central South University, Changsha, Hunan, P.R. China. (1)
Department of Cardiovascular Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Hepatobiliary Surgery, Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. (1)
Department of Molecular, Cellular, and Developmental Biology Yale University (1)
Department of Pathology and Duke Cancer Institute, Duke University School of Medicine,Durham, NC 27710, USA. (1)
Department of pathophysiology, School of Basic Medical Sciences, Wuhan University, Wuhan 430071, China (1)
Guangdong Medical University (1)

Tags

xref:PubMed:23747202 (1)
xref:PubMed:30457566 (1)
xref:PubMed:32055844 (1)
xref:PubMed:34412677 (1)
xref:PubMed:31903125 (1)

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Transcriptome and metabolome changes in Chinese cedar during cold acclimation reveal the roles of flavonoids in needle discoloration and cold resistance

Cryptomeria fortunei growth and development are usually affected by low temperatures. Despite the evergreen nature of this species, most needles turn yellowish-brown in cold winters. The underlying discoloration mechanisms that cause this phenomenon in response to cold acclimation remain...

2022-08-12 | MTBLS3184 | MetaboLights

CuI nanoparticle-catalyzed synthesis of tetracyclic benzo[e]benzo[4,5]imidazo[1,2-c][1,3]thiazin-6-imine heterocycles by S_NAr-type C-S, C-N bond formation from isothiocyanatobenzenes and benzimidazoles.

Not available

S-EPMC9081286 | biostudies-literature

Luminescence Properties and Mechanisms of CuI Thin Films Fabricated by Vapor Iodization of Copper Films.

Not available

S-EPMC5456966 | biostudies-literature

Dirac semimetal in β-CuI without surface Fermi arcs.

Not available

S-EPMC6099897 | biostudies-literature

ZIPK mediates endothelial cell contraction through myosin light chain phosphorylation and is required for ischemic-reperfusion injury.

Not available

S-EPMC6662964 | biostudies-literature

Deoxyelephantopin Induces Apoptosis and Enhances Chemosensitivity of Colon Cancer via miR-205/Bcl2 Axis.

Not available

S-EPMC9099879 | biostudies-literature

The Coordination Behaviour of CuI Photosensitizers Bearing Multidentate Ligands Investigated by X-ray Absorption Spectroscopy.

Not available

S-EPMC7496955 | biostudies-literature

Integrated Four Comparative-Omics Reveals the Mechanism of the Terpenoid Biosynthesis in Two Different Overwintering Cryptomeria fortunei Phenotypes

Chinese cedar (Cryptomeria fortunei) is a tree species with important ornamental, medicinal, and economic value. Terpenoids extracted from the essential oil of C. fortunei needles have been considered valuable ingredients in the pharmaceutical and cosmetic industries. However, the poss...

2022-08-12 | MTBLS3183 | MetaboLights

Secretome profiling of Cryptosporidium sporozoites in the initial interaction processes with host epithelial cells

Sporozoites secrete proteins which can help them adhere to/invade host cells during gliding motility on the surface of host cells. Currently, the composition of secreted proteins of C. parvum during adhesion/invasion of host cells is not fully understood. In this study, TMT labeled quantitative prot...

ORGANISM(S): Homo sapiens (Human) Limnobaculum parvum

2025-11-17 | PXD028969 | Pride

Magnetic hydrogel-assisted endoscopic submucosal dissection of large intestine in vitro animal experimental study.

Not available

S-EPMC12775096 | biostudies-literature

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5179 Results

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Organisms

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