Zhang H-H HH - OmicsDI

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Unknown (877)
Transcriptomics (132)
Genomics (40)
Proteomics (19)
Metabolomics (4)

Organisms

Homo sapiens (103)
Mus musculus (41)
Rattus norvegicus (10)
Drosophila melanogaster (4)
Arabidopsis thaliana (4)
Sus scrofa (3)
Larix kaempferi (2)
Bombyx mori (2)
Macaca mulatta (2)
Oryza sativa Indica Group (2)
Mycobacterium tuberculosis (2)
Gallus gallus (2)
Danio rerio (2)
Camellia sinensis (1)
Brassica oleracea (1)
Saccharomyces paradoxus (1)
Citrullus lanatus (1)
Macaca nemestrina (1)
Apis mellifera (1)
Schizosaccharomyces pombe (1)
Bos taurus (1)
Triticum aestivum (1)
Saccharomyces cerevisiae (1)
Escherichia coli (1)

Repository

biostudies-arrayexpress (139)
EGA (33)
pride (14)
MetaboLights (4)
iProX (2)
MassIVE (1)
PAXDB (1)
PeptideAtlas (1)

Tissue

Cell culture (7)
Epithelial cell (3)
Fibroblast (2)
Others (1)
Atrium (1)
Blood (1)
Endothelial cell of umbilical vein (1)
HEK-293T cell (1)
Keratinocyte (1)
Skin (1)
Stem cell (1)
T cell (1)
Urine (1)

Disease

Disease free (3)
Age related macular degeneration (1)
Breast cancer (1)
Kidney disease (1)
Severe acute respiratory syndrome (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (14)
Shotgun proteomics (9)
Bottom-up proteomics (3)
Mass spectrometry (2)
NMR spectroscopy (2)
Affinity purification coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
Gel-based experiment (2)
Affinity proteomics (1)

Instrument Platform

Chemostat (2)
Bruker (2)
Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Beadarray reader (1)
GenePix 4000B [Axon Instruments] (1)
Axon GenePix 4000B scanning hardware (1)
Q Exactive Plus (1)
Gas Chromatography MS - positive (1)
LTQ Orbitrap (1)

Publication Date

2012 (27)
2010 (25)
2014 (24)
2011 (17)
2015 (15)
2013 (14)
2016 (8)
2009 (7)
2023 (4)
2022 (4)
2024 (4)
2025 (3)
2007 (2)
2020 (2)
2021 (2)
2008 (1)
2006 (1)
2019 (1)
2017 (1)

UNIPROT ID/AC

10090.ENSMUSP00000005406 (1)
10090.ENSMUSP00000016144 (1)
10090.ENSMUSP00000032399 (1)
10090.ENSMUSP00000043341 (1)
10090.ENSMUSP00000048857 (1)
10090.ENSMUSP00000050156 (1)
10090.ENSMUSP00000061247 (1)
10090.ENSMUSP00000062660 (1)
10090.ENSMUSP00000071496 (1)
10090.ENSMUSP00000071652 (1)
10090.ENSMUSP00000071658 (1)
10090.ENSMUSP00000071763 (1)
10090.ENSMUSP00000072030 (1)
10090.ENSMUSP00000072521 (1)
10090.ENSMUSP00000072775 (1)
10090.ENSMUSP00000073754 (1)
10090.ENSMUSP00000076447 (1)
10090.ENSMUSP00000076538 (1)
10090.ENSMUSP00000078239 (1)
10090.ENSMUSP00000078339 (1)
10090.ENSMUSP00000078625 (1)
10090.ENSMUSP00000078670 (1)
10090.ENSMUSP00000078747 (1)
10090.ENSMUSP00000078877 (1)
10090.ENSMUSP00000079127 (1)
10090.ENSMUSP00000079727 (1)
10090.ENSMUSP00000079907 (1)
10090.ENSMUSP00000079944 (1)
10090.ENSMUSP00000080088 (1)
10090.ENSMUSP00000080543 (1)

ENSEMBL ID

ENSG00000170477 (1)

CHEBI ID

CHEBI:15354 (3)
CHEBI:15741 (3)
CHEBI:16704 (3)
CHEBI:18132 (3)
CHEBI:30769 (3)
CHEBI:30915 (3)
CHEBI:107636 (2)
CHEBI:116314 (2)
CHEBI:131659 (2)
CHEBI:132996 (2)
CHEBI:134473 (2)
CHEBI:134608 (2)
CHEBI:136551 (2)
CHEBI:137056 (2)
CHEBI:137704 (2)
CHEBI:137846 (2)
CHEBI:138420 (2)
CHEBI:138496 (2)
CHEBI:138643 (2)
CHEBI:138645 (2)
CHEBI:138758 (2)
CHEBI:138762 (2)
CHEBI:138784 (2)
CHEBI:138797 (2)
CHEBI:141419 (2)
CHEBI:141436 (2)
CHEBI:143821 (2)
CHEBI:144923 (2)
CHEBI:146162 (2)
CHEBI:149582 (2)

Metabolite Name

(-)-12-hydroxy-9,10-dihydrojasmonic acid (2)
(-)-8-hydroxy-11E,17-octadecadien-9-ynoic acid (2)
(E)-2-Methyl-2-buten-1-ol O-beta-D-Glucopyranoside (2)
1-Acetoxy-2-hydroxy-16-heptadecyn-4-one (2)
12alpha-Hydroxy-13,18-dehydroparain (2)
15beta-Hydroxydesogestrel (2)
2-hydroxy-7-methyl-Octanedioic acid (2)
3,7,12-Trioxo-5beta-chol-1-en-24-oic Acid (2)
3,7-Dihydroxy-8-methylflavone 7-rhamnosyl-(1->4)-rhamnosyl-(1->6)-glucoside (2)
3-(1-Hydroxymethyl-1-propenyl)pentanedioic acid (2)
3-(3,4-dimethyl-5-pentylfuran-2-yl)-propanoic acid (2)
3-Hydroxy-beta-ionol 3-[glucosyl-(1->6)-glucoside] (2)
4-Hydroxycinnamic acid (2)
4-Oxoretinol (2)
4-ene-Valproic acid (2)
5,7,9,11,13-tetradecapentaenoic acid (2)
5-Methoxyindoleacetate (2)
7,8-Dihydrovomifoliol 9-[apiosyl-(1->6)-glucoside] (2)
7-Epi-12-hydroxyjasmonic acid glucoside (2)
7S,8S-DiHOTrE (2)
8-Amino-7-oxononanoic acid (2)
9-B1-PhytoP (2)
APC (2)
Blumealactone B (2)
Butyl (S)-3-hydroxybutyrate glucoside (2)
Butyl 3-O-beta-D-glucopyranosyl-butanoate (2)
Choline (2)
Creatine (2)
D-Glutamine (2)
Deoxynivalenol 3-glucoside (2)

Study type

Transcription profiling by array (89)
RNA-seq of non coding RNA (18)
RNA-seq of coding RNA (9)
ChIP-seq (6)
ChIP-chip by tiling array (3)
Transcription profiling by tiling array (3)
Other (3)
Transcription profiling by RT-PCR (2)
MicroRNA profiling by array (2)
Methylation profiling by array (2)
ChIP-chip by array (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2022 (107)
2021 (96)
2024 (92)
2025 (88)
2020 (79)
2023 (77)
2019 (56)
2016 (50)
2015 (50)
2018 (50)
2014 (45)
2012 (44)
2010 (38)
2017 (38)
2013 (34)
2011 (29)
2009 (17)
2026 (9)
2008 (8)
2007 (2)
2004 (2)
2002 (2)
2006 (1)
2003 (1)
1999 (1)

Lab affiliation

Wiita Lab, Department of Laboratory Medicine, University of California San Francisco, USA (2)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Cheeloo College of Medicine, Shandong University, Jinan 250002, PR.China. Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei 230001, China. (1)
Department of Biochemistry and Molecular Biology Department of Urology, Mayo clinic, Rochester MN, US (1)
Department of Cardiology, Institute of Cardiovascular Diseases, First Affiliated Hospital of Dalian Medical University, Dalian, China (1)
Department of Emergency Medicine, Beijing Key Laboratory of Cardiopulmonary Cerebral Resuscitation, Beijing Chaoyang Hospital, Capital Medical University, China (1)
Department of Medicine, Division of Nephrology, Icahn School of Medicine at Mount Sinai, New York, NY, USA. (1)
Department of Molecular & Integrative Physiology,University of Michigan Medical School, 5325 Brehm Tower, 1000 Wall St., Ann Arbor, MI, 48105 (1)
Department of Obstetrics and Gynecology, University of Wisconsin-Madison, WI,USA. (1)
Department of Proteomics and Signal Transduction; Max-Planck Institute of Biochemistry; Martinsried, Bavaria, 82152; Germany (1)
Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research, NIAID, NIH, Department of Health and Human Services, Unites States Government (1)
State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Guangdong Key Laboratory of Nasopharyngeal Carcinoma Diagnosis and Therapy, Sun Yat-sen University Cancer Center, Guangzhou 510060, China (1)
The University of Melbourne (1)

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Identification of pathogenic microRNAs in Helicobacter pylori-associated gastric cancer

To identify dysregulated miRNA(s) upon infection with H. pylori during different pre-malignant and malignant stages of gastric cancer in a mouse model miRNA expression in pre-neoplastic and neoplastic lesions in murine stomachs induced by H. pylori and N-methyl-N-nitrosourea (MNU) after 12 months wa...

ORGANISM(S): Mus musculus

2015-03-04 | E-GEOD-62503 | biostudies-arrayexpress

Mapping origins of replication in Arabidopsis thaliana: H4K5ac ChIP vs. unmodified H3 ChIP

Genomic integrity requires faithful chromosome duplication. Origins of replication are the genomic sites where DNA replication initiates in every cell cycle. There are multiple origins scattered throughout the eukaryotic genome whose genome-wide identification has been a hard challenge, especially i...

ORGANISM(S): Arabidopsis thaliana

2011-11-06 | E-GEOD-21827 | biostudies-arrayexpress

Leptin Promotes White Adipocyte Browning by Inhibiting the Hh Signaling Pathway.

Not available

S-EPMC6523697 | biostudies-literature

Gut-neuron interaction via Hh signaling regulates intestinal progenitor cell differentiation in Drosophila.

Not available

S-EPMC4860846 | biostudies-literature

The critical role of dysregulated Hh-FOXM1-TPX2 signaling in human hepatocellular carcinoma cell proliferation.

Not available

S-EPMC7388463 | biostudies-literature

Simultaneous Inhibition of MEK and Hh Signaling Reduces Pancreatic Cancer Metastasis.