Zhang Hua H - OmicsDI

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Unknown (1546)
Proteomics (89)
Transcriptomics (46)
Metabolomics (14)
Genomics (11)
Models (1)
Other (1)

Organisms

Homo sapiens (48)
Andropogon gerardi (36)
Bacteria (36)
Canis lupus familiaris (36)
Chromatiales bacterium OalgGamma1 (36)
Clavibacter nebraskensis NCPPB 2581 (36)
Cnidaria (36)
Ensifer adhaerens (36)
Mus musculus (27)
Drosophila melanogaster (4)
Oryza sativa Indica Group (3)
Oryza sativa (2)
Arabidopsis thaliana (2)
Rattus norvegicus (2)
Oryza rufipogon (1)
Brassica oleracea (1)
Oryza longistaminata (1)
Shigella flexneri (1)
Listeria monocytogenes (1)
Oryza sativa Japonica Group (1)
Caenorhabditis elegans (1)
Gallus gallus (1)
Cavia porcellus (1)
Codonopsis pilosula subsp. tangshen (1)
Medicago truncatula (1)
Monoraphidium dybowskii (1)
Pyrus x bretschneideri (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Sus scrofa domesticus (1)
Tardigrada (1)

Repository

biostudies-arrayexpress (48)
iProX (47)
pride (36)
MetaboLights (13)
EGA (7)
MassIVE (4)
ENA (2)
BioModels (1)
GNPS (1)
GPMDB (1)
PAXDB (1)
PeptideAtlas (1)

Tissue

Cell culture (10)
Spleen (5)
Lung (4)
Epithelial cell (3)
Blood cell (2)
Whole body (2)
Atrium (1)
Blood (1)
Blood plasma (1)
Blood serum (1)
Brain (1)
Cell suspension culture (1)
Early embryonic cell (1)
Heart (1)
Kidney (1)
Leaf (1)
Liver (1)
Peripheral blood mononuclear cell (1)
Permanent cell line cell (1)
Plant cell (1)
Root (1)
Saliva (1)
Seminal plasma (1)
Skin (1)
Stem cell (1)

Disease

Hepatitis B (2)
Lung cancer (2)
Endometrioid carcinoma (1)
Not Available (1)
Acute leukemia (1)
Breast cancer (1)
Cardiovascular system disease (1)
Disease free (1)
Major depressive disorder (1)
Malaria (1)
Melanoma (1)
Myocardial ischemia (1)

Technology Type

Mass Spectrometry (36)
Shotgun proteomics (22)
Mass spectrometry (12)
Bottom-up proteomics (5)
Data-dependent acquisition (2)
Mass spectrometry assay (1)
Affinity purification coupled with mass spectrometry proteomics (1)
Data-independent acquisition (1)
Gel-based experiment (1)
Glycoproteomics (1)
Mass spectrometry imaging (1)
SRM/MRM (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (5)
Q Exactive (2)
Liquid Chromatography MS - alternating - reverse phase (2)
Illumina Genome Analyzer II (1)
MicrOTOF-Q II (1)
Instrument (1)
LTQ Orbitrap Elite (1)
LTQ XL (1)
Q Exactive HF (1)
Q Exactive HF-X (1)
GC色Agilent 7890A, Agilent ,LECOChroma TOF PEGASUS HT, LECO (1)
Gas Chromatography MS - (1)
5975C Series GC/MSD (Agilent) (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
LTQ (1)

Publication Date

2022 (17)
2025 (14)
2023 (13)
2012 (10)
2020 (9)
2014 (9)
2024 (9)
2015 (7)
2026 (6)
2021 (6)
2010 (5)
2016 (4)
2013 (4)
2011 (4)
2008 (3)
2018 (3)
2007 (2)
2006 (2)
2019 (1)

UNIPROT ID/AC

2AAA_YEAST (1)
2NDP_YEAST (1)
3HAO_YEAST (1)
4932.YBR084C-A (1)
4932.YDL191W (1)
4932.YDR025W (1)
4932.YEL054C (1)
4932.YER102W (1)
4932.YER117W (1)
4932.YER137C-A (1)
4932.YER159C-A (1)
4932.YGR161C-C (1)
4932.YGR161W-B (1)
4932.YGR296C-A (1)
4932.YHR055C (1)
4932.YHR218W-A (1)
4932.YIL018W (1)
4932.YIL069C (1)
4932.YJR145C (1)
4932.YKR059W (1)
4932.YKR094C (1)
4932.YLL066C (1)
4932.YLL067C (1)
4932.YLR035C-A (1)
4932.YLR157C-A (1)
4932.YLR227W-A (1)
4932.YLR467W (1)
4932.YML026C (1)
4932.YML040W (1)
4932.YML133W-A (1)

CHEBI ID

CHEBI:15428 (5)
CHEBI:30915 (5)
CHEBI:15741 (5)
CHEBI:30769 (5)
CHEBI:30794 (4)
CHEBI:16865 (4)
CHEBI:30832 (4)
CHEBI:18300 (4)
CHEBI:16811 (4)
CHEBI:15843 (4)
CHEBI:48131 (4)
CHEBI:6650 (4)
CHEBI:17859 (4)
CHEBI:18012 (4)
CHEBI:18183 (4)
CHEBI:17895 (4)
CHEBI:17351 (4)
CHEBI:17626 (3)
CHEBI:18101 (3)
CHEBI:75108 (3)
CHEBI:33404 (3)
CHEBI:48430 (3)
CHEBI:28757 (3)
CHEBI:30838 (3)
CHEBI:22660 (3)
CHEBI:17242 (3)
CHEBI:35932 (3)
CHEBI:16530 (3)
CHEBI:50129 (3)
CHEBI:1148 (3)

Metabolite Name

Glycine (4)
Benzoic acid (4)
Arachidonic acid (4)
Citric acid (4)
Azelaic acid (4)
Adipic acid (4)
Thymidine (4)
Gluconolactone (4)
Linoelaidic acid (3)
4-Hydroxyphenylpyruvic acid (3)
3-Methyl-2-oxovaleric acid (3)
3-Hydroxyisovaleric acid (3)
N-Acetylserine (3)
2-Hydroxy-3-methylbutyric acid (3)
Valine (3)
Nicotinic acid (3)
Pyroglutamic acid (3)
Homovanillic acid (3)
Methylsuccinic acid (3)
2-Isopropylmalic acid (3)
Pelargonic acid (3)
Pyruvic acid (3)
Succinic acid (3)
Methionine (3)
Fumaric acid (3)
Cholic acid (3)
2-Furoic acid (3)
Itaconic acid (3)
Isocitric acid (3)
Caprylic acid (3)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

First Public Date

2023 (2)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (32)
RNA-seq of non coding RNA (5)
RNA-seq of coding RNA (4)
Methylation profiling by high throughput sequencing (2)
ChIP-chip by tiling array (1)
Cell line - One-color microarray (1)
Comparative genomic hybridization by array (1)
Other (1)
Methylation profiling by array (1)

Release Date

2025 (244)
2022 (223)
2024 (191)
2023 (188)
2021 (164)
2020 (138)
2019 (76)
2018 (71)
2017 (64)
2016 (44)
2015 (43)
2014 (33)
2026 (29)
2012 (27)
2013 (16)
2011 (15)
2010 (12)
2008 (8)
2009 (4)
2007 (3)
2003 (1)

Lab affiliation

State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, China. (3)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China (3)
State Key Lab of Plant Genomics Institute of Genetics and Developmental Biology Chinese Academy of Sciences, Beijing 100101, China Chaoyang District, Beichen West Road, Campus #1, No. 2 (2)
State Key Laboratory of Microbial Metabolism (2)
Associate Professor, Department of Laboratory Medicine, UCSF (1)
Beijing Friendship Hospital, Capital Medical University (1)
Capital Medical University (1)
College of Animal Science and Technology, Northwest A&F University, Yangling, Shaanxi, China (1)
College of Veterinary Medicine, Shaanxi Centre of Stem Cells Engineering & Technology, Northwest A&F University, Yangling, Shaanxi, 712100, China (1)
Cornell University (1)
Department of Biochemistry and Structural Biology and Center for Innovative Drug Discovery School of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Drive, San Antonio, TX 78229, United States (1)
Department of Bioloigcal Science, National University of Singapore (1)
Department of Emergency Medicine, Beijing Key Laboratory of Cardiopulmonary Cerebral Resuscitation, Beijing Chaoyang Hospital, Capital Medical University, China (1)
Department of Laboratory Medicine, UCSF (1)
Department of Neurology, the First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, China (1)
Institute of Animal Husbandry and Veterinary Sciences, Zhejiang Academy of Agricultural Sciences (1)
Institute of Animal Husbandry and Veterinary Sciences, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China (1)
Institute of Reproductive Health, Tong Ji Medical College, Hua Zhong University of Science and Technology, Wuhan, China. (1)
Key Laboratory of Acupuncture and Medicine Research of Ministry of Education, Nanjing University of Chinese Medicine (1)
Liver Research Center, Beijing Friendship Hospital, Capital Medical University (1)
National Key Laboratory of Crop Genetic Improvement Huazhong Agricultural University Wuhan 430070, China (1)
School of Life Sciences and Biotechnology (1)
School of Life Sciences and Biotechnology, Shanghai Jiao Tong University (1)
Shanghai Jiao Tong University (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai 200240, China; (1)
State Key Laboratory of Microbial Metabolism, Joint International Research Laboratory of Metabolic & Developmental Sciences, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China. (1)
State Key Laboratory of Microbial Metabolism, School of Life Science and Biotechnology, Shanghai Jiao Tong University (1)
State Key Laboratory of Microbial Metabolism,School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China (1)
State Key Laboratory of Sheep Genetic Improvement and Healthy Production, Xinjiang Academy of Agricultural and Reclamation Science, Shihezi, China (1)
The First Affiliated Hospital of Nanjing Medical University (1)

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Health Risk Assessments and Microbial Community Analyses of Groundwater from a Heavy Metal-Contaminated Site in Hezhou City, Southwest China.

Not available

S-EPMC9819039 | biostudies-literature

Zhang-arabidopsis-auxin vs NPA

transcription profiling of different development stage and different treatment

ORGANISM(S): Arabidopsis thaliana

2012-02-22 | E-MEXP-3127 | biostudies-arrayexpress

Transcription profiling of Arabidopsis pollen germination and tube growth

Pollen germination, along with pollen tube growth, is an essential process for the reproduction of flowering plants. The germinating pollen with tip-growth characteristics provides an ideal model system for the study of cell growth and morphogenesis. As an essential step towards a detailed underst...

ORGANISM(S): Arabidopsis thaliana

2008-10-25 | E-GEOD-6696 | biostudies-arrayexpress

Fei-Yan-Qing-Hua decoction attenuates influenza virus infection by enhancing host antiviral response through microbiota-derived acetate.

Not available

S-EPMC11499185 | biostudies-literature

Metabolomics approach by ¹H NMR spectroscopy of serum reveals progression axes for asymptomatic hyperuricemia and gout.

Not available

S-EPMC5989453 | biostudies-literature

Imaginal disc growth factor maintains cuticle structure and controls melanization in the spot pattern formation of Bombyx mori

The complex stripes and patterns of insects play key roles in behavior and ecology. However, the fine-scale regulation mechanisms underlying pigment formation and morphological divergence remain largely unelucidated. Here we demonstrated that imaginal disc growth factor (IDGF) maintains cuticle s...

2020-09-20 | MTBLS1825 | MetaboLights

Jian-Pi-Gu-Shen-Hua-Yu Decoction Alleviated Diabetic Nephropathy in Mice through Reducing Ferroptosis.

Not available

S-EPMC10960652 | biostudies-literature

Yi-Shen-Hua-Shi regulates intestinal microbiota dysbiosis and protects against proteinuria in patients with chronic kidney disease: a randomized controlled study.

Not available

S-EPMC11085992 | biostudies-literature

HS-GC-IMS Coupled With Chemometrics Analyzes Volatile Aroma Compounds in Steamed <i>Polygonatum cyrtonema</i> Hua at Different Production Stages.

Not available

S-EPMC11986191 | biostudies-literature

Yi-Shen-Hua-Shi Granule Alleviates Adriamycin-Induced Glomerular Fibrosis by Suppressing the BMP2/Smad Signaling Pathway.

Not available