Zhang Jian J - OmicsDI

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Unknown (695)
Proteomics (132)
Transcriptomics (24)
Metabolomics (17)
Genomics (16)
Models (1)

Organisms

Homo sapiens (75)
Schizophyllum commune H4-8 (30)
Mycobacterium tuberculosis SP7 (30)
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 (30)
Oryza sativa Japonica Group (30)
Rabbit calicivirus (30)
Mus musculus (29)
Arabidopsis thaliana (7)
Drosophila melanogaster (5)
Rattus norvegicus (4)
Locusta migratoria (2)
Gallus gallus (2)
Gossypium hirsutum (1)
Bombyx mori (1)
Oryza sativa Indica Group (1)
Oryza sativa (1)
Cynoglossus semilaevis (1)
Streptomyces (1)
Gymnocypris przewalskii (1)
Middle East respiratory syndrome-related coronavirus (1)
Rasamsonia (1)
Thermomyces (1)
Aspergillus (1)
Fragaria vesca (1)
Mytilus coruscus (1)
Synechocystis sp. PCC 6803 (1)
Aphis craccivora (1)
Danio rerio (1)
Saccharomyces cerevisiae (1)
Rattus rattus (1)

Repository

iProX (97)
biostudies-arrayexpress (30)
pride (30)
MetaboLights (17)
EGA (10)
MassIVE (4)
BioModels (1)
jPOST (1)

Tissue

Leaf (5)
Plant cell (4)
Blood (3)
Blood cell (3)
Cell culture (3)
Blood plasma (2)
Embryo (2)
Whole body (2)
Liver (2)
Amniotic fluid (1)
Semen (1)
Lymph node (1)
Primary cell (1)
Blood platelet (1)
Dendritic cell (1)
Whole plant (1)
Bone marrow (1)
Seed (1)
Cerebrospinal fluid (1)
Fibroblast (1)
Stem cell (1)
Lung (1)
Heart (1)
Epithelial cell (1)
Hepatocyte (1)

Disease

Non-alcoholic steatohepatitis (2)
Malaria (2)
Disease free (2)
Antenatal onset (1)
Hydronephrosis (1)
Type 2 diabetes mellitus (1)
Wounds and Injuries (1)

Technology Type

Mass Spectrometry (30)
Mass spectrometry (16)
Shotgun proteomics (11)
Affinity purification coupled with mass spectrometry proteomics (9)
Data-dependent acquisition (3)
SWATH MS (3)
Olink affinity proteomics (2)
Affinity proteomics (2)
Bottom-up proteomics (2)
Top-down proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Mass spectrometry assay (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (8)
Liquid Chromatography MS - positive - reverse phase (7)
Q Exactive (3)
Python (1)
Nugen Ovation SPIA; Wafergen’s Apollo liquid handler; KAPA Hyper Prep Library Kit (1)
QIAGEN TissueLyser II (1)
Isoflurane euthanasia chamber (1)
Illumina HiSeq 2000 (1)
LTQ Orbitrap Elite (1)
LTQ Orbitrap Velos (1)
Agilent SPE-IMS-MS (1)
Agilent 7890A+LECO Chroma TOF PEGASUS HT (1)
GCMS-QP2010 Plus (Shimadzu) (1)
Gas Chromatography MS - positive - medium polarity - Flame ionisation detector MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Xevo G2 QTOF (Waters) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Liquid Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - positive - hilic (1)

Publication Date

2022 (31)
2023 (13)
2021 (13)
2024 (11)
2019 (10)
2015 (9)
2017 (9)
2026 (7)
2025 (6)
2012 (5)
2013 (4)
2020 (4)
2018 (4)
2014 (3)
2010 (3)
2007 (3)
2016 (2)
2011 (1)
2005 (1)

CHEBI ID

CHEBI:30769 (8)
CHEBI:15843 (7)
CHEBI:17895 (6)
CHEBI:17351 (6)
CHEBI:15756 (6)
CHEBI:30763 (5)
CHEBI:48131 (5)
CHEBI:16704 (5)
CHEBI:16335 (5)
CHEBI:17521 (5)
CHEBI:16708 (5)
CHEBI:36005 (5)
CHEBI:15891 (5)
CHEBI:27897 (5)
CHEBI:18183 (5)
CHEBI:30915 (5)
CHEBI:18012 (5)
CHEBI:15741 (5)
CHEBI:24266 (5)
CHEBI:16440 (4)
CHEBI:17786 (4)
CHEBI:17385 (4)
CHEBI:32806 (4)
CHEBI:73830 (4)
CHEBI:15318 (4)
CHEBI:17620 (4)
CHEBI:21563 (4)
CHEBI:16259 (4)
CHEBI:28834 (4)
CHEBI:30887 (4)

Metabolite Name

Arachidonic acid (5)
Naringenin (4)
Adenosine (4)
Adenine (4)
Inosine (4)
Docosahexaenoic acid (4)
4-indolecarbaldehyde (3)
Dehydrocholic acid (3)
Leucylproline (3)
Trans-aconitic acid (3)
6-hydroxymelatonin (3)
Syringic acid (3)
Hesperetin (3)
Genistein (3)
4-hydroxybenzaldehyde (3)
Phloretin (3)
Rutin (3)
Isorhamnetin (3)
Ferulic acid (3)
Azelaic acid (3)
Taurine (3)
Jasmonic acid (3)
Uric acid (3)
Xanthine (3)
Uridine (3)
Citric acid (3)
Fumaric acid (3)
2-amino-3-methoxybenzoic acid (2)
N-acetyl-D-tryptophan (2)
7-hydroxycoumarine (2)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modelling Approach

Constraint-based model (1)

Modification

Not available (1)

Study type

Transcription profiling by array (11)
RNA-seq of coding RNA (8)
Methylation profiling by high throughput sequencing (5)
Transcription profiling by SAGE (1)
Genotyping by array (1)
Other (1)
ChIP-seq (1)
RNA-seq of total RNA (1)
RNA-seq of non coding RNA (1)

Release Date

2025 (123)
2023 (100)
2024 (98)
2022 (97)
2021 (58)
2020 (52)
2019 (29)
2018 (27)
2017 (24)
2015 (19)
2014 (19)
2026 (18)
2016 (17)
2012 (13)
2013 (11)
2010 (8)
2011 (6)
2007 (3)
2005 (1)
2009 (1)

Lab affiliation

School of Life Sciences, Xiamen University (2)
The First Affiliated Hospital of Fujian Medical University (2)
Department of Pathophysiology, Key Laboratory of Ministry of Education for Neurological Disorders, School of Basic Medicine, Tongji Medical College, Huazhong University of Science and Technology (2)
Institute of Hydrobiology, Chinese Academy of Sciences (2)
Department of Cardiology, Renmin Hospital of Wuhan University, Wuhan 430060, China (2)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
China national rice research institute (1)
School of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen University, Shenzhen, Guangdong, China. (1)
China National Rice Research Institute (1)
State Key Lab of Rice Biology, China National Rice Research Institute (1)
Institute of Plant Virology, Ningbo University, Ningbo, (1)
Department of Cardiology, Shanghai East Hospital, Tongji University School of Medicine, No. 150 Jimo Road, Shanghai 200120, China. (1)
Shanghai Key Laboratory of Regulatory Biology, School of Life Sciences, East China Normal University, Shanghai 200241, China. (1)
Shanghai Center for Plant Stress Biology (1)
Shanghai Center for Plant Stress Biology, Chinese Academy of Sciences, Shanghai,201602, China (1)
Department of Immunology, Xiangya School of Basic Medicine，Central South University, China (1)
Institute of Microbiology, Shandong University, China (1)
Department of Obstetrics, Xiangya Hospital Central South University, Changsha, China (1)
Department of Pharmacy, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology (1)
Professor of Pathology Endowed Chair in Immunology Research University of Iowa Health Care Distinguished Scholar Department of Pathology The University of Iowa Tel: 319-335-1121 (O)/319-335-0990 (Lab) (1)
Jian Zhang Ph.D and Professor China National Rice Research Institute 28 shuidaosuo road Fuyang, Hangzhou P.R.China 311400 Office: +86 571 63370277 Cell: +86 13656661382 Email: zhangjian@caas.cn (mailto:zhangjian@caas.cn) (1)
Jian Zhang Ph.D and Professor China National Rice Research Institute 28 shuidaosuo road Fuyang, Hangzhou P.R.China 311400 Office: +86 571 63370277 Cell: +86 13656661382 Email: zhangjian@caas.cn (1)
state key lab of rice biology china national rice research institute (1)
Northwest University (1)
Cornell University (1)

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Tibetan medicine Bang Jian: a comprehensive review on botanical characterization, traditional use, phytochemistry, and pharmacology.

Not available

S-EPMC10757618 | biostudies-literature

Bidirectional Effects of Mao Jian Green Tea and Its Flavonoid Glycosides on Gastrointestinal Motility.

Not available

S-EPMC9956896 | biostudies-literature

Effect of dietary L-glutamate levels on growth, digestive and absorptive capability, and intestinal physical barrier function in Jian carp (Cyprinus carpio var. Jian).

Not available

S-EPMC7283372 | biostudies-literature

Transcriptomic and metabolomic comparison of two Kandelia obovata cultivas in response to cold wave

Temperature is the primary environmental factor that restricts the growth and distribution of mangrove plants. With the escalating severity of global climate change, Kandelia obovata has gained widespread recognition as an ideal species for investigating the response mechanisms of mangroves to cold ...

2024-09-27 | MTBLS9845 | MetaboLights

Not available

S-EPMC4047331 | biostudies-literature

The alteration of 5-hydroxymethylcytosine modification contributes to ischemic brain injury [5hmC-seq]

Epigenetic modifications, such as cytosine methylation and histone modification, have been shown involved in the pathology of ischemic brain injury. Recent works have implicated 5-hydroxymethylcytosine (5hmC), a DNA base derived from 5-methylcytosine (5mC) through the oxidation by Ten-Eleven Translo...

ORGANISM(S): Mus musculus

2015-09-08 | E-GEOD-67188 | biostudies-arrayexpress

Validation of the Anticolitis Efficacy of the Jian-Wei-Yu-Yang Formula.

Not available

S-EPMC9451982 | biostudies-literature

Parsing the Q-Markers of Baoyin Jian to Treat Abnormal Uterine Bleeding by High-Throughput Chinmedomics Strategy.

Not available

S-EPMC10221270 | biostudies-literature

Pi-Dan-Jian-Qing Decoction Ameliorates Type 2 Diabetes Mellitus Through Regulating the Gut Microbiota and Serum Metabolism.

Not available

S-EPMC8685325 | biostudies-literature

Involvement of Circulating Exosomal MicroRNAs in Jian-Pi-Yi-Shen Formula Protection Against Adenine-Induced Chronic Kidney Disease.