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TranscriptomicsIdentification of miRNAs and their target genes in developing seeds of soybean by deep sequencing
In our study, small RNA library and degradome library were constructed from developing soybean seeds for deep sequencing. We identified 26 new miRNAs in soybean by bioinformatic analysis, and further confirmed their expression by stem-loop RT-PCR. The miRNA star sequences of 38 known miRNAs and 8 ne...
ORGANISM(S): Glycine max 
2010-11-11 | E-GEOD-25260 | biostudies-arrayexpress
ProteomicsA translational regulator MHZ9 modulates ethylene signaling in rice
In this project, we identified a novel RNA-binding protein, MHZ9. And we analyzed the potential proteins interacted with MHZ9 through immunoprecipitation-mass spectrometry (IP-MS). The N-terminal domain of MHZ9 (MHZ9-N) contains a putative RNA splicing and modification domain PRP4. To identify RNA b...
ORGANISM(S): Oryza sativa (Rice) 
2023-07-20 | PXD041240 | Pride
Q exactive mass spectrometer (thermo scientific) Gyf-domain Oryza_sativa Rna-crosslinked peptide 
TranscriptomicsMelatonin enhances plant growth and abiotic stress tolerance in soybean plants
Melatonin is a well-known agent that plays multiple roles in animals. Its possible function in plants is less clear. In the present study, we tested the effect of melatonin (N-acetyl-5-methoxytryptamine) on soybean growth and development. Both spraying of leaves and seed-coating with melatonin signi...
ORGANISM(S): Glycine max 
2014-08-31 | E-GEOD-57960 | biostudies-arrayexpress
UnknownFunctional characterization of the ER stress induced X-box-binding protein-1 (Xbp-1) in the porcine system.
Not available
S-EPMC3112107 | biostudies-literature
MetabolomicsMetabolomic Profiling of the Striatum in Shank3 Knockout ASD Rats: Effects of Early Swimming Regulation

OBJECTIVE: This study aimed to investigate the regulatory impact of early swimming intervention on striatal metabolism in Shank3 gene knockout ASD model rats.

METHODS: Shank3 gene knockout exon 11-21 male 8-day-old SD rats were used as experimental subject...

2024-09-27 | MTBLS8577 | MetaboLights
UnknownExosome-Mediated miR-155 Transfer from Smooth Muscle Cells to Endothelial Cells Induces Endothelial Injury and Promotes Atherosclerosis.
Not available
S-EPMC5475247 | biostudies-literature
UnknownAltered Behaviors and Impaired Synaptic Function in a Novel Rat Model With a Complete Shank3 Deletion.
Not available
S-EPMC6444209 | biostudies-literature
UnknownSeaweed-derived fucoidans and rhamnan sulfates serve as potent anti-SARS-CoV-2 agents with potential for prophylaxis.
Not available
S-EPMC11157668 | biostudies-literature
Genomics32c6825c-80c0-4d0f-9284-cc7c1a39e68a - samples
Whole transcriptome sequencing (RNA-seq) was performed on 39 PC specimens. Among them, 21 specimens also had WES data.
EGAD00001004365 | EGA
Genomicsc9d38693-41de-4186-90c3-5e52d1913254 - samples
Whole-exome sequencing (WES) was performed on a total of 34 PC specimens, with 15 cases having matched gDNAs extracted from blood.
EGAD00001004364 | EGA
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