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TranscriptomicsProteomic and transcriptomic responses to thiamethoxam in the Sweetpotato whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae)
We investigated the transcriptional response to thiamethoxam in the Bemisia tabaci using Illumina sequencing technology. A total of 1,338 genes were differently expressed in the thiamethoxam-resistant whiteflies. All the B biotype whiteflies were maintained on cabbage. The susceptible strain (TH-S)...
ORGANISM(S): Bemisia tabaci 
2013-07-15 | E-GEOD-42102 | biostudies-arrayexpress
TranscriptomicsMultidimensional regulation in transcriptome during sexual development in Neurospora crassa revealed with RNA sequencing
Fungi exhibit a huge diversity in morphology and ecology, and genetic basis of morphological development in sexual reproduction of multi-cellular fungi has not been fully investigated with genome-wide approaches. Model organism Neurospora crassa is the very first sequenced genome for multi-cellular ...
ORGANISM(S): Neurospora crassa 
2013-10-10 | E-GEOD-41484 | biostudies-arrayexpress
TranscriptomicsRNA-seg of CD8+ T cells from colorectal cancer tumor tissues in wildtype and Lypd6−/− mice
RNA-sequencing analyses were performed in CD8+ T cells sorted from MC38 tumors of WT and Lypd6b−/− mice， To investigate the effects of Lypd6b gene knockout on CD8+ T cells in the colon cancer tumor microenvironment. Abstract Lypd6b is a newly discovered molecule associated with neuromodulation. Howe...
ORGANISM(S): Mus musculus 
2025-12-11 | E-MTAB-16060 | biostudies-arrayexpress
TranscriptomicsAlzheimer's Disease Dataset
FK506 binding protein 51kDa (FKBP51/FKBP5) is part of a mature heat shock protein 90kDa (Hsp90) chaperone complex that preserves tau. Microarray analysis of human brains reveal that FKBP51 gene expression selectively increased with age and Alzheimer's disease, which correlated with demethylation of ...
ORGANISM(S): Homo sapiens 
2014-04-21 | E-GEOD-48350 | biostudies-arrayexpress
TranscriptomicsDetection of genome-wide copy number variations in two chicken lines divergently selected for abdominal fat content
Background: The chicken (Gallus gallus) is an important model organism that bridges the evolutionary gap between mammals and other vertebrates. Copy number variations (CNVs) are a form of genomic structural variation widely distributed in the genome. CNV analysis has recently gained greater attentio...
ORGANISM(S): Gallus gallus 
2015-05-20 | E-GEOD-58551 | biostudies-arrayexpress
TranscriptomicsAIN-2::GFP IP of mRNAs associated with miRISC in stage sychronized C. elegans populations
AIN-2::GFP IP were used to purify miRISC from stage sychronized C.elegans populations (Egg, L1, L2, L3 and L4 stages). The mRNA composition of the IP results and the corresponding total RNA samples were analyzed by WUSTL Caenorhabditis elegans Whole Genome 23k Oligo Array. The miRISC associated mRNA...
ORGANISM(S): Caenorhabditis elegans 
2009-05-21 | E-GEOD-16208 | biostudies-arrayexpress
TranscriptomicsDigital gene expression analysis of ACMV-infected cassava
Cassava mosaic disease caused by cassava begomoviruses is the most serious disease of cassava in Africa. However, the molecular mechanisms leading to symptom development of infected cassava plants are poorly understood. Here a high throughput digital gene expression profiling (DGE) based on Illumina...
ORGANISM(S): Manihot esculenta 
2014-04-01 | E-GEOD-47224 | biostudies-arrayexpress
TranscriptomicsA Whole Transcriptional Linkage Analysis of Gene Co-Regulation in Insecticide Resistant House Flies, Musca domestica
Illumina HiSeq 2000 RNASeq was conducted on the mRNA fraction of three adult female Musca domestica strains. Two strains were the insecticide susceptible strains CS and aabys, which has five distinct recessive morphological markers, one on each of the five autosomes in M. domestica. The third strain...
ORGANISM(S): Musca domestica 
2014-01-02 | E-GEOD-39327 | biostudies-arrayexpress
TranscriptomicsNext Generation Sequencing Comparison of C57BL/6J and BC027072 -/- Eye Transcriptomes
We report the single base pair analysis of the ocular transcriptome from wild type and BC027072 knockout animals. Comparison was analyzed to understand gene expression changes in a mouse model for early onset retinal degeneration which phenocopies a human form of autosomal recessive retinitis pigmen...
ORGANISM(S): Mus musculus 
2015-02-03 | E-GEOD-63810 | biostudies-arrayexpress
TranscriptomicsTranscriptome profiling of Bemisia tabaci reveals stage-specific gene expression signatures for thiamethoxam resistance
To investigated the stage-specific gene expression response to thiamethoxam in the Bemisia tabaci, we have designed the Agilent eArray platform to identify stage-regulated gene expression towards thiamethoxam exposure. All the B biotype Bemisia tabaci were maintained on cabbage. Thiamethoxam suscept...
ORGANISM(S): Bemisia tabaci 
2013-11-01 | E-GEOD-42337 | biostudies-arrayexpress
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