Zhang Ping P - OmicsDI

Show results for

Unknown (266)
Proteomics (151)
Transcriptomics (54)
Metabolomics (15)
Genomics (13)
Multiomics (7)
Other (1)

Organisms

Homo sapiens (96)
Mus musculus (38)
Bos taurus (4)
Bombyx mori (3)
Drosophila melanogaster (3)
Rattus norvegicus (2)
Mycolicibacterium smegmatis MC2 155 (2)
Deinococcus gobiensis (1)
Schizosaccharomyces pombe (1)
Oryza sativa (1)
Glycine max (1)
Gallus gallus (1)
Saccharomyces cerevisiae (1)
Sus scrofa (1)
Danio rerio (1)
Acetonema longum DSM 6540 (1)
Arabidopsis thaliana (1)
Bacillus velezensis UCMB5036 (1)
Blastobotrys adeninivorans (1)
Bos grunniens (1)
Clostridium kluyveri DSM 555 (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Dialister invisus (1)
Histomonas meleagridis (1)
Lactobacillus helveticus CIRM-BIA 103 (1)
Leuconostoc citreum LBAE C10 (1)
Levilactobacillus brevis KB290 (1)
Megasphaera cerevisiae DSM 20462 (1)
Papilio xuthus (1)
Rattus rattus (1)

Repository

iProX (82)
biostudies-arrayexpress (59)
pride (39)
PeptideAtlas (16)
MetaboLights (14)
MassIVE (11)
EGA (8)
PAXDB (3)
GNPS (1)
GPMDB (1)

Tissue

Plasma Non-glyco (11)
Cell culture (10)
Testis (7)
Others (3)
Bone marrow (3)
Male Reproductive System (2)
Blood serum (2)
Cell suspension culture (2)
Epithelial cell (2)
Hepatocyte (2)
Liver (2)
Permanent cell line cell (2)
Blood plasma (1)
Colon (1)
Diploid cell (1)
Haploid cell (1)
Hippocampus (1)
Leaf (1)
Leg muscle (1)
Leukocyte (1)
Ovary (1)
Prostate cancer cell line (1)
Prostate gland epithelium (1)
Seed (1)
Sperm (1)
Stem cell (1)

Disease

Breast cancer (3)
Not Available (1)
Brain glioblastoma multiforme (1)
Colon cancer (1)
Disease free (1)
Kidney disease (1)
Liver cancer (1)

Technology Type

Mass Spectrometry (39)
Shotgun proteomics (24)
Mass spectrometry (9)
Affinity purification coupled with mass spectrometry proteomics (5)
Bottom-up proteomics (5)
Data-dependent acquisition (4)
Mass spectrometry assay (3)
Gel-based experiment (3)
NMR spectroscopy (2)
Top-down proteomics (2)
Illumina Genome Analyzer II, Illumina HiSeq 2000 (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)

Instrument Platform

LTQ Orbitrap Velos (14)
Liquid Chromatography MS - positive - reverse phase (6)
Liquid Chromatography MS - negative - reverse phase (6)
Q Exactive (3)
MS:1000031 (3)
LTQ Orbitrap Elite (3)
Q Exactive HF (2)
Bruker (2)
Liquid Chromatography MS - positive - reverse-phase (2)
Liquid Chromatography MS - negative - reverse-phase (2)
Liquid Chromatography MS - positive - hilic (2)
Illumina HiSeq 2500 (1)
MicrOTOF-Q II (1)
Instrument (1)
LTQ Orbitrap (1)
Q Exactive HF-X (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Gas Chromatography MS - positive (1)
Xevo QTof MS (Waters) (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - negative - hilic (1)
QExactive (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Applied biosystems / mds sciex q trap (1)
Applied biosystems / mds sciex qstar (1)
Thermo lcq deca (1)
Thermo lcq deca xp (1)
Thermo ltq (1)
UNKNOWN UNKNOWN (1)

Publication Date

2015 (21)
2019 (20)
2022 (18)
2023 (16)
2016 (14)
2014 (14)
2011 (11)
2020 (11)
2025 (11)
2024 (10)
2012 (10)
2013 (8)
2010 (7)
2021 (6)
2018 (5)
2026 (3)
2017 (3)
2009 (1)
2005 (1)
2007 (1)

UNIPROT ID/AC

10116.ENSRNOP00000000015 (1)
10116.ENSRNOP00000000222 (1)
10116.ENSRNOP00000000447 (1)
10116.ENSRNOP00000000791 (1)
10116.ENSRNOP00000001467 (1)
10116.ENSRNOP00000002904 (1)
10116.ENSRNOP00000003622 (1)
10116.ENSRNOP00000003646 (1)
10116.ENSRNOP00000004127 (1)
10116.ENSRNOP00000004997 (1)
10116.ENSRNOP00000005601 (1)
10116.ENSRNOP00000005854 (1)
10116.ENSRNOP00000006385 (1)
10116.ENSRNOP00000006566 (1)
10116.ENSRNOP00000006672 (1)
10116.ENSRNOP00000006851 (1)
10116.ENSRNOP00000006978 (1)
10116.ENSRNOP00000008094 (1)
10116.ENSRNOP00000008328 (1)
10116.ENSRNOP00000008592 (1)
10116.ENSRNOP00000008848 (1)
10116.ENSRNOP00000008851 (1)
10116.ENSRNOP00000009204 (1)
10116.ENSRNOP00000009326 (1)
10116.ENSRNOP00000009407 (1)
10116.ENSRNOP00000009816 (1)
10116.ENSRNOP00000010058 (1)
10116.ENSRNOP00000011325 (1)
10116.ENSRNOP00000011545 (1)
10116.ENSRNOP00000011812 (1)

ENSEMBL ID

ENSG00000170477 (16)
ENSG00000147251 (8)
ENSG00000247315 (5)
ENSG00000214897 (2)
ENSG00000229353 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17895 (6)
CHEBI:30769 (6)
CHEBI:15354 (5)
CHEBI:16828 (5)
CHEBI:17368 (5)
CHEBI:17780 (4)
CHEBI:7916 (4)
CHEBI:17203 (4)
CHEBI:15971 (4)
CHEBI:17053 (4)
CHEBI:16027 (4)
CHEBI:30915 (4)
CHEBI:16919 (4)
CHEBI:17191 (4)
CHEBI:17295 (4)
CHEBI:49168 (3)
CHEBI:17172 (3)
CHEBI:21563 (3)
CHEBI:18132 (3)
CHEBI:17858 (3)
CHEBI:16040 (3)
CHEBI:17802 (3)
CHEBI:16750 (3)
CHEBI:15729 (3)
CHEBI:17361 (3)
CHEBI:16977 (3)
CHEBI:16958 (3)
CHEBI:16610 (3)
CHEBI:15741 (3)
CHEBI:17154 (3)

Metabolite Name

Guanine (5)
Hypoxanthine (5)
Uracil (4)
5-Hydroxy-L-tryptophan (4)
L-Histidine (4)
Indole (4)
Choline (4)
4-Hydroxybenzaldehyde (4)
Spermidine (4)
Cytosine (4)
Creatine (4)
L-Valine (4)
L-Tyrosine (4)
N-Acetyl-D-galactosamine (3)
D-Ornithine (3)
Sphingosine (3)
L-Proline (3)
L-Arginine (3)
L-Ornithine (3)
Caffeic acid (3)
Phosphocholine (3)
Citric acid (3)
Theophylline (3)
Adenosine (3)
Azelaic acid (3)
D-Ribose (3)
Caffeine (3)
Bilirubin (3)
L-Phenylalanine (3)
Inosine (3)

Modification

Not available (1)

Study type

Transcription profiling by array (39)
RNA-seq of coding RNA (7)
ChIP-seq (5)
Other (2)
Methylation profiling by array (2)
Transcription profiling by SAGE (1)
Transcription profiling by tiling array (1)
Comparative genomic hybridization by array (1)
RNA-seq of non coding RNA (1)

Release Date

2024 (36)
2022 (31)
2025 (30)
2023 (28)
2020 (27)
2021 (25)
2013 (18)
2015 (17)
2016 (14)
2014 (14)
2011 (14)
2018 (14)
2012 (13)
2019 (13)
2017 (11)
2010 (8)
2026 (5)
2008 (3)
2009 (2)
2005 (1)
2002 (1)

Lab affiliation

Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, Collaborative Innovation Center of Hematology, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200000, China (3)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine, Beijing 102206, China (3)
Department of Biochemistry and Molecular Biology, Capital Medical University, Beijing, 100069, China (2)
Peking Union Medical College (2)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Engineering Research Center for Protein Drugs, National Center for Protein Sciences, Beijing Institute of Radiation Medicine, Beijing 102206, China (2)
Anhui Agricultural University,China (1)
BGI-shenzhen (1)
Beijing Municipal Key Laboratory of Child Development and Nutriomics, Capital Institute of Pediatrics, Beijing, China (1)
Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， Beijing 102206 P.R. China. (1)
Beijing Tongren Hospital, Capital Medical University (1)
Beijing proteome research center, Beijing, China (1)
Capital Medical University (1)
Institute of Hydrobiology, Chinese Academy of Sciences (1)
Key Laboratory of Modern Molecular Breeding of Advantageous Crops of Ningxia, School of Agriculture, Ningxia University, Yinchuan, Ningxia 750021, China (1)
Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, the Chinese Academy of Sciences (1)
PEKING UNIVERSITY (1)
Ping Xu, Ph.D. Secretary General of CNHUPO Department of Genomics and Proteomics, State Key Laboratory of Proteomics, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, (1)
School of Medicine and Institutes for Life Sciences, South China University of Technology,Guangzhou, China (1)
Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, Beijing Institute of Radiation Medicine， 33 Life Science Park Road, Beijing 102206, P.R. China. Tel 0086-10-80727777 EXT 1314 (1)
Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences Beijing Beijing Institute of Radiation Medicine， 38 Life Science Park Road, Beijing 102206, P.R. China. (1)
Sequence database group (1)
Shandong University (1)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences Beijing, Beijing Institute of Lifeomics, Beijing 102206, China (1)
State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences Beijing, Beijing Institute of Radiation Medicine, Beijing 102206, P. R. China (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206 (1)
State Key Laboratory of Proteomics, National Center for Protein Sciences Beijing, Beijing Proteome Research Center (1)
State Key Laboratory of Proteomics; Beijing Proteome Research Center; National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics; China (1)
State Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (1)
The Sixth Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong, China (1)

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PING 2.0: An R/Bioconductor package for nucleosome positioning using next-generation sequencing data

MNase-Seq and ChIP-Seq have evolved as popular techniques to study chromatin and histone modification. Although many tools have been developed to identify enriched regions, software tools for nucleosome positioning are still limited. We introduce a flexible and powerful open-source R package, PING 2...

ORGANISM(S): Saccharomyces cerevisiae

2013-07-11 | E-GEOD-47073 | biostudies-arrayexpress

[HPP-2.0] Phosphoproteome Profiling of uEV Reveals p-AQP2 and p-GSK3β as Potential Markers for Diabetic Nephropathy

We used ultra-high-sensitivity quantitative phosphoproteomics to identify phosphoproteins in urinary extracellular vesicles (uEVs) as potential biomarkers of DN. We detected 233 phosphopeptides within the uEVs, with 47 phosphoproteins exhibiting significant alterations in patients with DN compared t...

ORGANISM(S): Homo Sapiens

2024-02-01 | PXD049107 |

An uncertain future: perspectives of emerging adults with inflammatory bowel disease-a qualitative semistructured interview study in eastern China.

Not available

S-EPMC11574518 | biostudies-literature

[HPP-2.0] Phosphoproteome Profiling of uEV Reveals p-AQP2 and p-GSK3β as Potential Markers for Diabetic Nephropathy-2

ORGANISM(S): Homo Sapiens Bos Taurus

2024-02-20 | PXD049714 |

Expression profiling of the retinal pigment epithelium in zebrafish smarca4 mutant

Purpose: The purpose of this study was to develop a framework for analyzing RPE expression profiles from zebrafish eye mutants. Methods: The fish model we used was smarca4 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4), a retinal dystrophic muta...

ORGANISM(S): Danio rerio

2014-01-03 | E-GEOD-50241 | biostudies-arrayexpress

A network pharmacology-based approach to analyse potential targets of traditional herbal formulas: An example of Yu Ping Feng decoction.

Not available

S-EPMC6065326 | biostudies-literature

Effects of Yu-Ping-Feng polysaccharides (YPS) on the immune response, intestinal microbiota, disease resistance and growth performance of Litopenaeus vannamei.

Not available

S-EPMC7333637 | biostudies-literature

Yu ping feng san for pediatric allergic rhinitis: A systematic review and meta-analysis of randomized controlled trials.

Not available

S-EPMC8021384 | biostudies-literature

Yu-Ping-Feng-San improve the immunosuppression of microenvironment in hepatocellular carcinoma by promoting the maturation of DCs through the JAK2-STAT3 pathway.