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TranscriptomicsDNA copy number changes in prostate cancer cell lines
Abstract: BACKGROUND: The aim of this study was to characterize gene expression and DNA copy number profiles in androgen sensitive (AS) and androgen insensitive (AI) prostate cancer cell lines on a genome-wide scale. METHODS: Gene expression profiles and DNA copy number changes were examined using D...
ORGANISM(S): Homo sapiens 
2006-01-11 | E-GEOD-4017 | biostudies-arrayexpress
UnknownPhase Ib/II Study of Pembrolizumab and Pegylated-Interferon Alfa-2b in Advanced Melanoma.
Not available
S-EPMC6286160 | biostudies-literature
TranscriptomicsGenome-wide characterization of gene expression variations and DNA copy number changes in prostate cancer cell lines
This SuperSeries is composed of the following subset Series: GSE4016: Gene expression variations in prostate cancer cell lines GSE4017: DNA copy number changes in prostate cancer cell lines Abstract: BACKGROUND: The aim of this study was to characterize gene expression and DNA copy number profiles ...
ORGANISM(S): Homo sapiens 
2006-03-07 | E-GEOD-4396 | biostudies-arrayexpress
UnknownSpatial transcriptomic analysis of the mouse brain following chronic social defeat stress.
Not available
S-EPMC10742195 | biostudies-literature
TranscriptomicsTranscription profiling and comparative genomic hybridization of prostate cancer cell lines
Not available
ORGANISM(S): Homo sapiens 
2005-11-09 | E-SMDB-2973 | biostudies-arrayexpress
TranscriptomicsTranscription profiling and comparative genomic hybridization of prostate cancer cell lines
Not available
ORGANISM(S): Homo sapiens 
2005-11-09 | E-SMDB-2972 | biostudies-arrayexpress
ProteomicsThe evolution of Proteomics in the genus Flaveria
C4 photosynthesis overpasses C3 by a higher photosynthetic rate, along with a higher water and nitrogen use efficiency. The establishment of C4 photosynthesis requires modification of ancestral C3 in both anatomical and metabolic aspects, both are involved in many functional pathways which have not ...
ORGANISM(S): Flaveria ramosissima 
2025-01-21 | PXD024720 | Pride
Flaveria C4 photosynthesis Evolution Proteomics 
GenomicsGenomic landscape of Epstein-Barr virus nuclear antigen 3A
We undertook ChIP-Seq of HA-tagged EBNA3A in Lymphoblastoid Cell Lines to understand the effects of this essential viral transcription factor on the cell DNA. We discovered that EBNA3A bound to DNA with BATF, IRF4 and RUNX3, making these Transcription Factors the ones that tether EBNA3A to DNA, allo...
ORGANISM(S): Homo sapiens 
2015-01-06 | E-GEOD-59181 | biostudies-arrayexpress
GenomicsEpstein Barr Virus Nuclear Antigen 3C binds to BATF/IRF4/SPI1 sites and represses CDKN2A by recruiting Sin3A
We report the application of ChIP Seq to study the Epstein Barr Virus Nuclear Antigen 3C, an essential transcriptional regulator involved in the transformation of Resting B Lymphocytes to the immortalized Lymphoblast Cell Lines Examination of viral and cellular transcription factors in 1 type of cel...
ORGANISM(S): Homo sapiens 
2013-12-22 | E-GEOD-52632 | biostudies-arrayexpress
GenomicsAcquired Copy Number Alterations in Adult Acute Myeloid Leukemia Genomes

We performed genome-wide copy number analysis with paired normal and tumor DNA obtained from 86 adult patients with de novo AML using the Affymetrix Genome-Wide Human SNP array 6.0 containing 1.85 million features. Acquired copy number alterations (CNA) were confirmed using an independent, hig...

phs000201.v1.p1 | EGA
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