Zhao Cai C - OmicsDI

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Unknown (1949)
Proteomics (51)
Metabolomics (23)
Transcriptomics (12)
Genomics (4)

Organisms

Homo sapiens (31)
Mus musculus (15)
Severe acute respiratory syndrome coronavirus 2 (5)
Oryza sativa (2)
Rattus norvegicus (2)
Saccharomyces cerevisiae (2)
Setaria italica (1)
Plasmodium falciparum (1)
Arabidopsis thaliana (1)
Bos taurus (1)
Mus (1)
Oryctolagus cuniculus (1)
Ulva prolifera (1)
Sipunculus nudus (1)
Spinacia oleracea (1)
Staphylococcus aureus subsp. aureus NCTC 8325 (1)
Trichoderma asperellum CBS 433.97 (1)
Trichoderma atroviride IMI 206040 (1)
Trichoderma guizhouense (1)
Trichoderma parepimyces (1)
Trichoderma reesei QM6a (1)
Trichoderma virens Gv29-8 (1)
human gut metagenome (1)

Repository

pride (32)
MetaboLights (23)
iProX (19)
biostudies-arrayexpress (15)
EGA (1)

Tissue

Cell culture (5)
Epithelial cell (5)
Blood plasma (3)
Blood serum (3)
Leaf (2)
Blood (1)
Brain (1)
Feces (1)
Heart (1)
Hepatocyte (1)
Inner ear (1)
MC-38 cell (1)
Permanent cell line cell (1)
Whole body (1)

Disease

Breast cancer (1)
Colon cancer (1)
Disease free (1)
Lung cancer (1)
Mixed disorder as reaction to stress (1)

Technology Type

Mass Spectrometry (32)
Mass spectrometry (20)
Shotgun proteomics (18)
Bottom-up proteomics (6)
Mass spectrometry assay (3)
Affinity purification coupled with mass spectrometry proteomics (2)
Chemical cross-linking coupled with mass spectrometry proteomics (2)
Data-dependent acquisition (2)
SWATH MS (2)
Data-independent acquisition (1)
Gel-based experiment (1)
Top-down proteomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (11)
Liquid Chromatography MS - negative - reverse phase (10)
Liquid Chromatography MS - positive - hilic (4)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (2)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Neg)) (1)
Liquid Chromatography MS - Positive (LC-MS (Pos)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - alternating - reverse phase (1)
Liquid Chromatography MS - negative (1)
Liquid Chromatography MS - positive (1)
Xevo QTof MS (Waters) (1)
Applied biosystems / mds sciex 4700 proteomics analyzer (1)
Applied biosystems / mds sciex q trap (1)
Applied biosystems / mds sciex qstar (1)
Thermo lcq deca (1)
Thermo lcq deca xp (1)
Thermo ltq (1)
UNKNOWN UNKNOWN (1)
Waters q-tof (1)

Publication Date

2025 (15)
2022 (14)
2021 (11)
2023 (9)
2024 (8)
2020 (7)
2014 (4)
2026 (4)
2018 (4)
2016 (2)
2015 (2)
2013 (2)
2012 (2)
2019 (2)
2009 (1)
2008 (1)
2007 (1)

CHEBI ID

CHEBI:16828 (7)
CHEBI:17568 (7)
CHEBI:17895 (7)
CHEBI:15756 (6)
CHEBI:16335 (6)
CHEBI:16467 (6)
CHEBI:16857 (6)
CHEBI:18050 (6)
CHEBI:18183 (6)
CHEBI:15354 (5)
CHEBI:15891 (5)
CHEBI:16414 (5)
CHEBI:16643 (5)
CHEBI:16704 (5)
CHEBI:16708 (5)
CHEBI:16977 (5)
CHEBI:17015 (5)
CHEBI:17154 (5)
CHEBI:17196 (5)
CHEBI:17203 (5)
CHEBI:17295 (5)
CHEBI:17351 (5)
CHEBI:17368 (5)
CHEBI:17562 (5)
CHEBI:17748 (5)
CHEBI:18019 (5)
CHEBI:28875 (5)
CHEBI:28997 (5)
CHEBI:30769 (5)
CHEBI:30805 (5)

Metabolite Name

Uracil (10)
Adenine (9)
L-Tyrosine (8)
Hypoxanthine (7)
L-Glutamine (7)
L-Threonine (7)
Uridine (7)
Adenosine (6)
Betaine (6)
L-Alanine (6)
L-Arginine (6)
L-Histidine (6)
L-Methionine (6)
L-Serine (6)
Thymidine (6)
Xanthine (6)
Guanosine (5)
L-Asparagine (5)
L-Phenylalanine (5)
L-Proline (5)
L-Tryptophan (5)
L-Valine (5)
N-Acetyl-D-glucosamine (5)
Palmitic acid (5)
Urocanic acid (5)
Xanthosine (5)
2-Methylglutaric acid (4)
4-Hydroxybenzaldehyde (4)
4-Pyridoxic acid (4)
Azelaic acid (4)

Modification

15.994915 (1)
57.021464 (1)
Not available (1)

Study type

Transcription profiling by array (8)
ChIP-seq (3)
RNA-seq of non coding RNA (2)
Human - High-throughput sequencing (1)
RNA-seq of coding RNA (1)

Release Date

2025 (301)
2022 (272)
2024 (259)
2023 (241)
2021 (219)
2020 (165)
2019 (92)
2018 (85)
2017 (69)
2016 (60)
2015 (48)
2026 (45)
2014 (36)
2012 (17)
2013 (16)
2011 (13)
2010 (8)
2008 (6)
2009 (4)
2006 (3)
2004 (2)
2007 (1)
2001 (1)

Lab affiliation

Univeristy of Georgia (5)
1.Department of Otolaryngology-Head and Neck Surgery, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China 2.Ear Institute, Shanghai Jiao Tong University School of Medicine, Shanghai, China 3.Shanghai Key Laboratory of Translational Medicine on Ear and Nose Diseases, Shanghai, China (1)
1Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 2Department of Biochemistry and Biophysics, University of North Carolina at Chapel Hill School of Medicine, Chapel Hill, NC 27599, USA. 3Biological and Biomedical Sciences Program, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA. (1)
Associate Professor Developmental and Regenerative Biology School of Biomedical Sciences Faculty of Medicine The Chinese University of Hong Kong (1)
BGI-Shenzhen (1)
Beijing Institute of Pharmacology and Toxicology (1)
CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, Institute of High Energy Physics and National Center for Nanoscience and Technology of China, Chinese Academy of Sciences, Beijing 100049, P. R. China (1)
Central Laboratory, Wuxi Maternity and Child Health Care Hospital Affiliated to Nanjing Medical University (1)
Department of Chemistry Center for Gastrointestinal Biology and Disease Integrated Program for Biological and Genome Sciences University of North Carolina at Chapel Hill (1)
Department of Health Technology & Informatics (HTI), The Hong Kong Polytechnic University (PolyU) (1)
Department of Obstetrics/Gynecology, Joint Laboratory of Reproductive Medicine (SCU-CUHK), Key Laboratory of Obstetric, Gynecologic and Pediatric Diseases and Birth Defects of Ministry of Education, West China Second University Hospital, Sichuan University, Chengdu 610041, China. (1)
Department of Orthopaedics, Peking University Third Hospital (1)
Department of Pharmacy at the Second Affiliated Hospital, Harbin Medical University, Harbin, China. (1)
Department of Rehabilitation Medicine, Dapeng New District Nan’ao People’s Hospital, Rehabilitation Branch of the First Affiliated Hospital of Shenzhen University, Shenzhen, China. (1)
Dr. Zongmin Zhao. Assistant Professor, Department of Pharmaceutical Sciences, UIC Retzky College of Pharmacy, University of Illinois Chicago (1)
Jiangsu Academy of Agricultural Sciences (1)
Key Laboratory of Crop Physiology, Ecology and Genetic Breeding, Ministry of Education, Research Center of Super Rice Engineering and Technology, Jiangxi Agricultural University. No. 1101 Zhimin Avenue, Economic and Technological Development Zone, Nanchang City, Jiangxi Province (1)
Kobilka Institute of Innovative Drug Discovery, School ofMedicine, The Chinese University of Hong Kong, Shenzhen, China, 518172 (1)
MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University, 510275, Guangzhou, Guangdong, China. (1)
Northeast Forestry University (1)
Northwest University (1)
ProCan, Children's Medical Research Institute, 214 Hawkesbiry Rd, Westmead, NSW 2145 Australia (1)
School of Natural Sciences, and ARC Centre of Excellence in Synthetic Biology, Macquarie University, Sydney, Australia. The Australian Genome Foundry, Sydney, Australia. (1)
Sequence database group (1)
Shanghai Jiao Tong University (1)
Sun Yat-sen University (1)
Tongji University Cancer Center, Shanghai Tenth People's Hospital, School of Medicine, Tongji University, Shanghai, 200072, China. (1)
Xi’an Children’s Hospital (The Affiliated Children’s Hospital of Xi’an Jiaotong University) (1)

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Profile of key metabolites and identification of HMGCS1-DHEA pathway in porcine Sertoli cells treated by Vitamin C

Vitamin C (Ascorbic acid, AA), as vital micro-nutrient, plays an essential role for male animal reproduction. Previously, we showed that vitamin C reprogrammed the transcriptome and proteome to change phenotypes of porcine immature Sertoli cells (iSCs). Here, we used LC-MS-based non-targeted metabol...

2024-07-31 | MTBLS9673 | MetaboLights

Integrative Taxonomy of the Spinous Assassin Bug Genus Sclomina (Heteroptera: Reduviidae: Harpactorinae) Reveals Three Cryptic Species Based on DNA Barcoding and Morphological Evidence.

Not available

S-EPMC8001484 | biostudies-literature

Doxorubicin-induced cardiomyocyte death is mediated by unchecked mitochondrial fission and mitophagy.

Not available

S-EPMC6766652 | biostudies-literature

Molecular Response of Ulva prolifera to Short-Term High Light Stress Revealed by a Multi-Omics Approach.

Not available

S-EPMC9687821 | biostudies-literature

Potential Global Distribution of Paracoccus marginatus, under Climate Change Conditions, Using MaxEnt.

Not available

S-EPMC10888652 | biostudies-literature

Genome-Wide Mining of the Tandem Duplicated Type III Polyketide Synthases and Their Expression, Structure Analysis of Senna tora.

Not available

S-EPMC10003783 | biostudies-literature

Fluoxetine and congenital malformations: a systematic review and meta-analysis of cohort studies.

Not available

S-EPMC5595931 | biostudies-literature

Genome-wide analysis of SPL7 regulated genes in Arabidopsis

To study the genes regulated by transcription factor SQUAMOSA PROMOTER BINDING PROTEIN-LIKE7 (SPL7) in Arabidopsis thaliana, we conducted chromatin immunoprecipitation-based sequencing (ChIP-seq) in 35S:FALG-SPL7 transgenic plant and spl7 mutant, and genome-wide sequencing-based transcript profiling...

ORGANISM(S): Arabidopsis thaliana

2014-04-15 | E-GEOD-45213 | biostudies-arrayexpress

Compilation of transcriptomics, non-targeted metabolomics and targeted metabolomics data in bovine mammary epithelial cells stimulated by ten different essential amino acids (Targeted metabolomics)

Divergence in the targeted amino acid profilings of bovine mammary epithelial cells (BMECs) were systematically captured with regard to 10 individual essential amino acid (EAA) availability. BMECs cultured in 6-well plates were first serum-starved overnight and subsequently assigned to 1 of 12 tr...

2024-03-04 | MTBLS3956 | MetaboLights

Integrating antigen capturing nanoparticles and type 1 conventional dendritic cell therapy for in situ cancer immunization

Eliciting a robust immune response against tumors is often hampered by the inadequate presence of effective antigen presenting cells and their suboptimal ability to present antigens within the immunosuppressive tumor microenvironment. Here, we report a cascade antigen relay strategy integrating anti...

ORGANISM(S): Mus musculus (Mouse)

2025-04-03 | PXD062399 | Pride

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