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ProteomicsDisome-seq reveals sequence-mediated coupling of translational pauses and protein structures
The regulation of translation elongation plays a vital role in protein folding; an adequate translational pause provides time and cellular environments for the co-translational folding of nascent peptides. However, the genomic landscape, sequence determinants, and molecular consequences of translati...
ORGANISM(S): Saccharomyces cerevisiae (Baker's yeast) 
2020-12-10 | PXD015271 | Pride
Silac Saccharomyces cerevisiae 
ProteomicsQuantitative proteomics of Col and AtPABs mutant
To determine if the difference in AtPAB-binding efficiency affects protein levels, we performed the Tandem Mass Tag (TMT)-based quantitative proteomics on the two-week old seedlings of Col and the mut, respectively.
ORGANISM(S): Arabidopsis thaliana (Mouse-ear cress) 
2019-10-11 | PXD014071 | Pride
Poly(a)-binding proteins  binding efficiency  translationa  arabidopsis 
Genomicsena-DATASET-BGI-31-12-2014-03:23:33:590-567 - samples
Gastric Cancer (GC) is a highly heterogeneous disease. To identify potential clinically actionable therapeutic targets that may inform individualized treatment strategies, we performed whole-exome sequencing on 78 GCs of differing histologies and anatomic locations, as well as whole-genome sequencin...
EGAD00001001118 | EGA
GenomicsWGS and WES of 78 pairs Chinese gastric cancer
Gastric Cancer (GC) is a highly heterogeneous disease. To identify potential clinically actionable therapeutic targets that may inform individualized treatment strategies, we performed whole-exome sequencing on 78 GCs of differing histologies and anatomic locations, as well as whole-genome sequencin...
EGAS00001001056 | EGA
ProteomicsHuman Plasma Proteome with Three-dimensional Strategies by Highresolution Quadrupole Orbitrap Mass Spectrometry
Five three-dimensional strategies combining HAP depletion (the 1st dimension) and protein fractionation (the 2nd dimension), followed by LC-MS/MS analysis (the 3rd dimension) were developed and compared for human plasma proteome profiling. Pros and cons of the five strategies are discussed for two i...
ORGANISM(S): Homo Sapiens 
2017-06-20 | PXD008441 |
ProteomicsFusobacterium nucleatum Promotes PD-L1 Expression in Macrophages by Inducing Exosomal lncRNA MANCR from Colorectal Cancer Cells
This mass spectrometry dataset was generated from RNA pull-down assays to identify proteins interacting with lncRNA MANCR in colorectal cancer cells (HCT116) and macrophages (THP-1)
ORGANISM(S): Homo Sapiens 
2026-01-04 | PXD072638 |
ProteomicsProteomic sequencing of atrial fibrosis rat model caused by chronic intermittent hypoxia
This study was aimed to understand the changes of proteins occurring in atrial tissue of atrial fibrillation (AF) rat model based on proteome sequencing.SD rats were used for AF model construction by chronic intermittent hypoxia (CIH) induction. The tissue pathological changes were observed by hemat...
ORGANISM(S): Rattus Norvegicus 
2023-05-18 | PXD042312 |
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