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ProteomicsTMT-based quantitative proteomics analysis reveals the attenuated replication mechanism of Newcastle disease virus caused by nuclear localization signal mutation in viral matrix protein
Nuclear localization of cytoplasmic RNA virus proteins mediated by intrinsic nuclear localization signal (NLS) plays essential roles in successful virus replication. We previously reported that NLS mutation in the matrix (M) protein obviously attenuates the replication and pathogenicity of Newcastle...
ORGANISM(S): Cricetidae 
2020-05-22 | PXD018098 | Pride
Newcastle disease virus  matrix protein  nuclear localization signal  nucleocytoplasmic trafficking  tmt  quantitative proteomics 
ProteomicsEnrichment strategy for searching missing protein
Enrichment strategy for searching missing protein is a project under the guidance of Chromosome-Centric Human Proteome Project (C-HPP). We developed systematical enrichment strategies for revealing the existence of MPs including low molecular weight (LMW), membrane proteins, post-translational modif...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2019-06-12 | MSV000083957 | MassIVE
TranscriptomicsGenomic analysis of xCT-mediated regulatory network: identification of novel targets against AIDS-associated lymphoma
Kaposi’s sarcoma-associated herpesvirus (KSHV) is the etiological agent of primary effusion lymphoma (PEL), a rapidly progressing malignancy mostly arising in HIV-infected patients. Even under conventional chemotherapy, PEL continues to portend nearly 100% mortality within several months, which ur...
ORGANISM(S): Homo sapiens 
2015-11-23 | E-GEOD-65418 | biostudies-arrayexpress
TranscriptomicsRegulation of Gene Expression by Connective Tissue Growth Factor (CTGF) in Mesenchymal Stromal Cells (MSCs)
mRNA from bone marrow-derived MSCs stably expressing CTGF-specific shRNA (or empty vector control) was analyzed for differential gene expression. Significant differences were found in cell proliferation-related genes, especially genes related to the M phase of the cell cycle, which were down-regulat...
ORGANISM(S): Homo sapiens 
2013-08-05 | E-GEOD-47575 | biostudies-arrayexpress
ProteomicsHs_C-HPP_EnrichmentStrategy_membrane
Enrichment strategy for searching missing protein, HCCLM6 and MHCC97L, membrane and
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005437 | PeptideAtlas
ProteomicsHs_C-HPP_EnrichmentStrategy_LMW_Gel_Serum
Enrichment strategy for searching missing protein, LMW Proteins, in-house Gel-filter system
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005367 | PeptideAtlas
ProteomicsHs_C-HPP_EnrichmentStrategy_Phospho_HCCLM6
Enrichment strategy for searching missing protein, HCCLM6, Phospho
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005398 | PeptideAtlas
ProteomicsHs_C-HPP_EnrichmentStrategy_MHCC97L_membrane
Enrichment strategy for searching missing protein, MHCC97L, membrane
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005397 | PeptideAtlas
ProteomicsHs_C-HPP_EnrichmentStrategy_HCCLM6-Nuclear
Enrichment strategy for searching missing protein, HCCLM6, nuclear
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005357 | PeptideAtlas
ProteomicsHs_C-HPP_EnrichmentStrategy_Ubiquitination_ITCID
Enrichment strategy for searching missing protein, MHCC97H, Ubiquitination, ITCID
ORGANISM(S): Homo Sapiens (human) 
2015-12-31 | PAe005419 | PeptideAtlas
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