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MetabolomicsSymbiotic bacteria-derived organic acids protect Delia antiqua larvae from entomopathogenic fungal infection

The protection of associated microbiota for their animal hosts against pathogen infection has been studied widely over the last 100 years. However, how those microbes protect the animal host is limitedly investigated. In former studies, body surface microbes of one insect, Delia antiqua,...

2020-11-12 | MTBLS2074 | MetaboLights
ProteomicsCamellia nitidissima patal LC-MSMS
Camellia nitidissima is renowned for its distinctive golden-colored flowers and serves as a valuable resource for cultivating various yellow camellia varieties. we employed the Tandem Mass Tag (TMT) to construct a proteome map of C. nitidissima petals at five different developmental stages. As a res...
ORGANISM(S): Camellia nitidissima 
2024-10-19 | PXD042944 | Pride
Lc-msms Camellia nitidissima Tandem mass tag (tmt) Patal 
MetabolomicsEffects of altering serine metabolic pathways and ROS levels on macrolide resistant strains of Streptococcus suis

In this study, we proposed to obtain the differential metabolic pathways before and after the development of macrolide resistance in Streptococcus suis strain ATCC700494 and the macrolide resistant strain obtained by pre-laboratory induction of strain ATCC700794 as the test strains by non-targete...

2022-07-12 | MTBLS4618 | MetaboLights
TranscriptomicsExpression data from early rice endosperm
We used microarrays to detail the global programme of gene expression underlying cellularization and identified distinct classes of regulated genes during this process. Rice endosperm at 2 days after pollination(DAP) was selected for RNA extraction and hybridization on Affymetrix microarrays. We sou...
ORGANISM(S): Oryza sativa 
2015-09-01 | E-GEOD-57615 | biostudies-arrayexpress
GenomicsGenome-wide maps of DNA methylation state in rice embryo and endosperm
We report the application of methylacytosine immunoprecipetation combined with Illumina sequencing (MeDIP-seq) for high-throughput profiling of DNA methylation in rice embryo 3, 6, 9 DAP and endosperm 2, 3, 6, 9 DAP. A total number of 12-14 million of 2×49 bp paired-end reads was generated for each ...
ORGANISM(S): Oryza sativa 
2015-09-01 | E-GEOD-57706 | biostudies-arrayexpress
UnknownKetogenic diet-mediated steroid metabolism reprogramming improves the immune microenvironment and myelin growth in spinal cord injury rats according to gene and co-expression network analyses.
The ketogenic diet has been widely used in the treatment of various nervous system and metabolic-related diseases. Our previous research found that a ketogenic diet exerts a protective effect and promotes functional recovery after spinal cord injury. However, the mechanism of action is still unclear...
S-EPMC8148504 | biostudies-literature
UnknownTranscriptomic analysis of α-synuclein knockdown after T3 spinal cord injury in rats.

Background

Endogenous α-synuclein (α-Syn) is involved in many pathophysiological processes in the secondary injury stage after acute spinal cord injury (SCI), and the mechanism governing these functions has not been thoroughly elucidated to date. This research aims to characterize the effect...
S-EPMC6854783 | biostudies-literature
UnknownEffect of short-term combined alkaline stress on antioxidant metabolism, photosynthesis, and leaf-air temperature difference in sorghum.
Alkaline stress is important abiotic stress that restricts the growth and physiological activity of sorghum (Sorghum bicolor L. Moench). We aimed to investigate the effects of alkaline stress on alkali-tolerant SX44B and alkali-sensitive 262B sorghum inbred lines. The results showed that alka...
S-EPMC11558508 | biostudies-literature
UnknownAdaptor-Specific Antibody Fragment Inhibitors for the Intracellular Modulation of p97 (VCP) Protein-Protein Interactions.
Protein-protein interactions (PPIs) form complex networks to drive cellular signaling and cellular functions. Precise modulation of a target PPI helps explain the role of the PPI in cellular events and possesses therapeutic potential. For example, valosin-containing protein (VCP/p97) is a hub protei...
S-EPMC9335864 | biostudies-literature
UnknownLncRNA USP2-AS1 Promotes Hepatocellular Carcinoma Growth by Enhancing YBX1-Mediated HIF1α Protein Translation Under Hypoxia.
Recently, the role of lncRNAs in tumorigenesis and development has received increasing attention, but the mechanism underlying lncRNAs-mediated tumor growth in the hypoxic microenvironment of solid tumors remains obscure. Using RNA sequencing, 25 hypoxia-related lncRNAs were found to be upregulated ...
S-EPMC9174509 | biostudies-literature
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