Zhou Ye Y - OmicsDI

Show results for

Unknown (3359)
Proteomics (107)
Transcriptomics (15)
Metabolomics (8)
Genomics (4)

Organisms

Andropogon gerardi (64)
Bacteria (64)
Bartonella quintana JK 31 (64)
Canis lupus familiaris (64)
Clavibacter nebraskensis NCPPB 2581 (64)
Cnidaria (64)
Ensifer adhaerens (64)
Human alphaherpesvirus 1 strain 17 (64)
Human alphaherpesvirus 1 strain KOS (64)
Human betaherpesvirus 5 (64)
Human herpesvirus 2 strain 186 (64)
Mesocricetus auratus (64)
Homo sapiens (30)
Mus musculus (16)
Ovis aries (3)
Bos grunniens (1)
unidentified microorganism (1)
Bombyx mori (1)
Macaca mulatta (1)
Oryza sativa Japonica Group (1)
Triticum aestivum (1)
Arabidopsis thaliana (1)
Bos taurus (1)
Cyprinus carpio haematopterus (1)
Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 (1)
Medicago truncatula (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Staphylococcus aureus (1)
Vibrio parahaemolyticus RIMD 2210633 (1)
Oryza sativa (1)

Repository

pride (64)
iProX (40)
biostudies-arrayexpress (19)
MetaboLights (8)
jPOST (2)
MassIVE (1)

Tissue

Cell culture (13)
Epithelial cell (6)
Blood (5)
Leaf (4)
Macrophage (3)
Primary cell (3)
Root (3)
Whole body (3)
B cell (2)
Blood cell (2)
Blood plasma (2)
Embryonic stem cell (2)
Kidney (2)
Plant cell (2)
Stomach (2)
Bone marrow (1)
Early embryonic cell (1)
Embryo (1)
Epididymal white adipose tissue (1)
Gastric mucosa (1)
Gastrointestinal stromal tumor cell (1)
Heart (1)
Hepatocyte (1)
Liver (1)
Lung (1)
Monocyte (1)
Nasopharyngeal carcinoma cell (1)
Permanent cell line cell (1)
Seed coat (1)
T cell (1)

Disease

Breast cancer (4)
COVID-19 (3)
Disease free (2)
Acute leukemia (1)
Bacterial infectious disease (1)
Cardiovascular system disease (1)
Gastric ulcer (1)
Inflammation (1)
Multiple myeloma (1)
Polycystic Kidney (1)
Severe acute respiratory syndrome (1)
Stomach carcinoma (1)
Type 2 diabetes mellitus (1)
Uveitis (1)

Technology Type

Mass Spectrometry (64)
Shotgun proteomics (24)
Bottom-up proteomics (10)
Mass spectrometry (8)
Affinity purification coupled with mass spectrometry proteomics (7)
Top-down proteomics (7)
Data-dependent acquisition (5)
Gel-based experiment (5)
Data-independent acquisition (4)
SWATH MS (3)
Mass spectrometry imaging (2)
All-ion fragmentation (1)
Chemical cross-linking coupled with mass spectrometry proteomics (1)
Immunopeptidomics (1)
Proteogenomics (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Gas Chromatography MS - (2)
HiSeq X Ten (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 2000 (1)
Q Exactive (1)
Ultra-High Performance Liquid Chromatography-Q Exactive Plus MS&MS/MS-Negative(UHPLC-MS&MS/MS(Negative))(Thermo Scientific) (1)
Ultra-High Performance Liquid Chromatography - Time Of Flight MS - Negative (UPLC-TOF MS(Negative)) (Waters) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)

Publication Date

2025 (30)
2022 (16)
2021 (15)
2024 (14)
2023 (13)
2026 (8)
2020 (7)
2016 (6)
2015 (4)
2013 (4)
2012 (3)
2017 (3)
2019 (3)
2018 (3)
2014 (2)
2010 (2)
2011 (1)

CHEBI ID

CHEBI:17351 (4)
CHEBI:30769 (4)
CHEBI:21563 (3)
CHEBI:28918 (3)
CHEBI:28937 (3)
CHEBI:18292 (3)
CHEBI:16296 (3)
CHEBI:16927 (3)
CHEBI:22660 (3)
CHEBI:18186 (3)
CHEBI:16610 (3)
CHEBI:10072 (3)
CHEBI:27823 (3)
CHEBI:17650 (3)
CHEBI:17859 (3)
CHEBI:28834 (3)
CHEBI:36274 (3)
CHEBI:24813 (3)
CHEBI:43355 (3)
CHEBI:17405 (3)
CHEBI:16704 (3)
CHEBI:16995 (3)
CHEBI:17533 (3)
CHEBI:15891 (3)
CHEBI:28875 (3)
CHEBI:6650 (3)
CHEBI:15551 (3)
CHEBI:16196 (3)
CHEBI:73722 (3)
CHEBI:33569 (3)

Metabolite Name

Taurocholic acid (3)
Arachidonic acid (3)
Adenosine (3)
Hypoxanthine (3)
Sulfisoxazole (2)
21-Deoxycortisol (2)
Indole-3-ethanol (2)
Cefazolin (2)
Dimethylallyl pyrophosphate (2)
Piperanine (2)
Lactulose (2)
Amoxicillin (2)
Prostaglandin I2 (2)
Sakuranetin (2)
3-Methylindole (2)
Betamethasone (2)
Leucine (2)
Naringenin (2)
Malic acid (2)
Uracil (2)
Valine (2)
Ritodrine (2)
Ophthalmic acid (2)
Glycochenodeoxycholic acid (2)
Colchicine (2)
Biopterin (2)
Argininosuccinic acid (2)
Alpha-Zearalenol (2)
4-Pyridoxic acid (2)
Pilocarpine (2)

Study type

RNA-seq of coding RNA (7)
Transcription profiling by array (4)
Methylation profiling by high throughput sequencing (3)
RNA-seq of non coding RNA (2)
Animal - High-throughput sequencing (1)
Other (1)
ChIP-seq (1)

Release Date

2025 (588)
2023 (466)
2022 (458)
2024 (444)
2021 (344)
2020 (230)
2019 (145)
2018 (130)
2017 (120)
2016 (90)
2015 (84)
2026 (83)
2014 (75)
2013 (36)
2012 (34)
2011 (18)
2010 (14)
2009 (7)
2008 (4)
2004 (4)
2007 (1)
2005 (1)
2003 (1)
2000 (1)

Lab affiliation

1Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, Shanghai Key Laboratory of Signaling and Disease Research, School of Life Sciences and Technology, Tongji University, Shanghai, 200092, China (2)
Robert W. Holley Center for Agriculture and Health United States Department of Agriculture Agricultural Research Service (2)
Shanghai Institute of Rheumatology, Renji Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM) (2)
USDA-ARS (2)
University of Science and Technology of China (2)
Zhejiang University (2)
1 Department of Hepatobiliary Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, 230001, China. 2 Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. 3 Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Ben May department of cancer research, The university of Chicago (1)
Breast Tumor Center Sun Yat-Sen Memorial Hospital Sun Yat-Sen University 107 Yanjiang West Road Guangzhou 510120, P.R.China (1)
Chengdu university of traditional chinese medicine (1)
College of Pharmacy, Jinan University, Guangzhou 510632, P. R. China (1)
College of Pharmacy, Jinan University, Guangzhou, China (1)
Department of Analytical Chemistry and CAS Key Laboratory of Receptor Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China (1)
Department of Cardiovascular Surgery, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China (1)
Department of Cellular and Molecular Pharmacology University of California San Francisco (UCSF) (1)
Department of Dermatology, Xinhua Hospital, Shanghai Jiaotong University School of Medicine, Shanghai, China (1)
Department of Gastrointestinal Surgery, Zhongshan Hospital of Xiamen University, School of Medicine, Xiamen (1)
Department of General Surgery, Key Laboratory of Hepatosplenic Surgery, Ministry of Education, The First Affiliated Hospital of Harbin Medical University, Harbin 150001, China. Anhui Province Key Laboratory of Hepatopancreatobiliary Surgery, Hefei, Anhui, 230001, China. Anhui Provincial Clinical Research Center for Hepatobiliary Diseases, Hefei, Anhui, 230001, China. (1)
Department of Microbiology, The University of Hong Kong, Hong Kong, SAR, China (1)
Department of Molecular and Cellular Oncology, The University of Texas MD Anderson Cancer Center (1)
Department of Radiation Oncology, Nanfang Hospital, Southern Medical University (1)
Division of Biotechnology, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China (1)
Fujian Agriculture and Forestry University (1)
HHubei Academy of Agricultural Sciences, Wuhan, China ubei Academy of Agricultural Sciences, Wuhan, China (1)
Hu Bei province,enshi Acandemy of Agricutural sciences (1)
Huazhong Agricultural University (1)
Institutes of Biology and Medical Sciences, Soochow University, Suzhou, People's Republic of China (1)
Jinan University (1)
Key Laboratory of Chinese Ministry of Agriculture for Nuclear-Agricultural Sciences, Institute of Nuclear-Agricultural Sciences, Zhejiang University, China (1)
Lab of Biosystems and Microanalysis, State Key Laboratory of Bioreactor Engineering, East China University of Science and Technology, Shanghai, 200237, China. (1)