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TranscriptomicsGenomic alterations and gene expression in primary diffuse large B cell lymphomas of immune privileged sites
Primary diffuse large B cell lymphomas of different immune-privileged sites (IP-DLBCL) share many clinical and biological features, such as a relatively poor prognosis, preferential dissemination to other immune-privileged sites and deletion of the HLA region, which suggests that IP-DLBCL represents...
ORGANISM(S): Homo sapiens 
2008-06-18 | E-GEOD-10524 | biostudies-arrayexpress
GenomicsAggressive genomic features in clinicallyindolent primary HHV8-negative effusion-based lymphoma
Human herpesvirus 8-negative effusion-based lymphoma (HHV8-negative EBL) is a distinct lymphoma entity related to fluid overload states caused by underlying medical conditions. Due to a phenotypical resemblance with secondary effusion of diffuse large B-cell lymphoma (DLBCL), HHV8-negative EBL is ea...
EGAS00001002743 | EGA
Genomicsena-DATASET-VUMC-CCA-23-11-2021-14:40:18:772-260 - samples
Genomic profiling of effusion-based fluid samples from 8 HHV8-negative effusion-based lymphoma patients.
EGAD00001008364 | EGA
GenomicsRobust detection of translocations in lymphoma FFPE samples using Targeted Locus Capture-based sequencing - NGS targeted capture control cohort
In routine diagnostic pathology, cancer biopsies are preserved by Formalin-Fixed, Paraffin-Embedding (FFPE) procedures for examination of (intra-) cellular morphology. Such procedures inadvertently induce DNA fragmentation, which compromises sequencing-based analyses of chromosomal rearrangements. Y...
EGAS00001005325 | EGA
Genomicsena-DATASET-VUMC-CCA-26-05-2021-09:58:48:372-433 - samples
Control cohort of lymphoma samples sequenced with a hybrid capture panel designed to be able to detect translocations and mutations in lymphoma samples. used in the paper "Robust detection of translocations in lymphoma FFPE samples using Targeted Locus Capture-based sequencing"
EGAD00001007711 | EGA
Genomicsena-DATASET-VUMC-CCA-12-10-2016-16:43:39:044-188 - samples
Background: In follicular lymphoma (FL), studies addressing the prognostic value of microenvironment-related immunohistochemical (IHC) markers and tumor cell-related genetic markers have yielded conflicting results, precluding implementation in practice. Therefore, the Lunenburg Lymphoma Biomarker C...
EGAD00001002738 | EGA
GenomicsPrognostic relevance of microenvironmental factors CD163 and CD8 combined with EZH2 and chromosome 18 gain in a validation cohort of follicular lymphoma patients of the Lunenburg Lymphoma Biomarker Consortium
Background: In follicular lymphoma (FL), studies addressing the prognostic value of microenvironment-related immunohistochemical (IHC) markers and tumor cell-related genetic markers have yielded conflicting results, precluding implementation in practice. Therefore, the Lunenburg Lymphoma Biomarker C...
EGAS00001002049 | EGA
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