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TranscriptomicsDetermination of variability of fermentor-grown Aspergillus niger
Knowledge of the biological and technical variation for fermentor-grown Aspergillus niger cultures is needed to design DNA microarray experiments properly. We cultured A. niger in batch-operated fermentor vessels and induced with D-xylose. Transcript profiles were followed in detail by qPCR for 8 ge...
ORGANISM(S): Aspergillus niger 
2008-12-30 | E-GEOD-11405 | biostudies-arrayexpress
TranscriptomicsListeria monocytogenes SOS response determined after mitomycin C exposure
The SOS response is a conserved pathway that is activated under certain stress conditions and is regulated by the repressor LexA and the activator RecA. The food-borne pathogen Listeria monocytogenes contains RecA and LexA homologs, but their roles in Listeria have not been established. In this stud...
ORGANISM(S): Listeria monocytogenes EGD-e 
2010-05-19 | E-GEOD-12634 | biostudies-arrayexpress
TranscriptomicsCharacterization of lactic acid and acetic acid mutants in batch fermentation
Four C. thermocellum DSM-1313 derived strains were assessed using metabolite and DNA microarray tools in order to better understand carbon and electron flow within this organism. C. thermocellum is able to ferment cellulose into its fermentation end products L-lactate, acetate, formate, hydrogen gas...
ORGANISM(S): Clostridium thermocellum DSM 1313 
2012-03-01 | E-GEOD-27046 | biostudies-arrayexpress
TranscriptomicsThe transcriptional response of bioreactor-grown Aspergillus niger cultures towards three oils
The industrially important fungus Aspergillus niger feeds naturally on decomposing plant material, for which it is equipped with a range of enzyme systems. A significant proportion of plant material are lipids that might be available either as for energy storage or as membrane building blocks. With ...
ORGANISM(S): Aspergillus niger 
2010-05-06 | E-GEOD-14285 | biostudies-arrayexpress
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