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Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Transcription profiling of Bos taurus mammary gland infected with E. coli reveals infection induces distinct local and systemic transcriptome responses in the mammary gland (Super Series)

ABSTRACT: This SuperSeries is composed of the following subset Series:; GSE15019: Transcriptome analysis of bovine mammary gland tissue treated with E. coli for 6 hours; GSE15020: Transcriptome analysis of bovine mammary gland tissue treated with E. coli for 24 hours; GSE15022: Transcriptome analysis of bovine mammary gland tissue of an udder quarter adjacent to an E.coli treated one for 24 hrs Experiment Overall Design: Refer to individual Series

ORGANISM(S): Bos taurus

SUBMITTER: Stefan Krebs

PROVIDER: E-GEOD-15025 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Transcription profiling of Bos taurus mammary gland tissue of an udder quarter adjacent to an E.coli treated one for 24 hrs

Project description:By comparison of the transcriptome profiles of udder quarters neighboring to infected quarters and healthy udder tissue we analyse gene expression in the late stage of infection with E. coli 1303. Differentially expressed genes and transcription factors regulating coexpressed genes identified by SOTA clustering were used to identify key genes that define systemic reactions to infection with E. coli 1303. Experiment Overall Design: 10 samples, two conditions: udder quarters neighboring to one which was treated with E. coli for 24h vs healthy control * five replicates

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Transcription profiling of Bos taurus mammary gland tissue treated with E. coli for 6 hours

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