Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

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Gene expression profiling in equine polysaccharide storage myopathy


ABSTRACT: Standardized muscular biopsies of the dorsal compartment of the gluteus medius muscle were performed in 7 horses suffering from equine polysaccharide storage myopathy (PSSM) and 6 sound Norman Cob horses . Gene expression analysis was performed using an equine oligonucleotide microarray which included 384 equine gene probes of the nuclear genome and all the mitochondrial genes. All the samples of PSSM muscles were hybridized against the reference control muscles. This reference was made by pooling together all the mRNA extracted after in vitro transcription from the 6 control muscles of the sound horses. Briefly, the hybridization protocol was adapted from Le Brigand et al. (2006). An open-access long oligonucleotide microarray resource for analysis of the human and mouse transcriptomes. Nucleic Acids Res. 2006 Jul 19;34(12).

ORGANISM(S): Equus caballus

SUBMITTER: ERIC BARREY 

PROVIDER: E-GEOD-15572 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Gene expression profiling in equine polysaccharide storage myopathy revealed inflammation, glycogenesis inhibition, hypoxia and mitochondrial dysfunctions.

Barrey Eric E   Mucher Elodie E   Jeansoule Nicolas N   Larcher Thibaut T   Guigand Lydie L   Herszberg Bérénice B   Chaffaux Stéphane S   Guérin Gérard G   Mata Xavier X   Benech Philippe P   Canale Marielle M   Alibert Olivier O   Maltere Péguy P   Gidrol Xavier X  

BMC veterinary research 20090807


<h4>Background</h4>Several cases of myopathies have been observed in the horse Norman Cob breed. Muscle histology examinations revealed that some families suffer from a polysaccharide storage myopathy (PSSM). It is assumed that a gene expression signature related to PSSM should be observed at the transcriptional level because the glycogen storage disease could also be linked to other dysfunctions in gene regulation. Thus, the functional genomic approach could be conducted in order to provide new  ...[more]

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