Metabolomics,Unknown,Transcriptomics,Genomics,Proteomics

Dataset Information

Blood expression profiles define penetrance in DYT1 dystonia patients

ABSTRACT: DYT1 dystonia is an autosomal-dominantly inherited movement disorder, which is usually caused by a GAG deletion in the TOR1A gene. Due to the reduced penetrance of ~30-40%, the determination of the mutation in a subject is of limited use with regard to actual manifestation of symptoms. In the present study, we used Affymetrix oligonucleotide microarrays to analyze global gene expression in blood samples of 15 manifesting and 15 non-manifesting mutation carriers in order to identify a susceptibility profile beyond the GAG deletion which is associated with the manifestation of symptoms in DYT1 dystonia.We identified a genetic signature which distinguished between asymptomatic mutation carriers and symptomatic DYT1 patients with 86.7% sensitivity and 100% specificity. This genetic signature could correctly predict the disease state in an independent test set with a sensitivity of 87.5% and a specificity of 85.7%.Conclusively, this genetic signature might provide a possibility to distinguish DYT1 patients from asymptomatic mutation carriers. Comparison of whole blood expression profiles of patients with DYT1 dystonia with non manifesting mutation carriers and non mutation carriers

ORGANISM(S): Homo sapiens

SUBMITTER: Michael Walter

PROVIDER: E-GEOD-19419 | biostudies-arrayexpress |

REPOSITORIES: biostudies-arrayexpress

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Publications

Expression profiling in peripheral blood reveals signature for penetrance in DYT1 dystonia.

Walter M M Bonin M M Pullman R Saunders RS Valente E M EM Loi M M Gambarin M M Raymond D D Tinazzi M M Kamm C C Glöckle N N Poths S S Gasser T T Bressman S B SB Klein C C Ozelius L J LJ Riess O O Grundmann K K

Neurobiology of disease 20100104 2

DYT1 dystonia is an autosomal-dominantly inherited movement disorder, which is usually caused by a GAG deletion in the TOR1A gene. Due to the reduced penetrance of approximately 30-40%, the determination of the mutation in a subject is of limited use with regard to actual manifestation of symptoms. In the present study, we used Affymetrix oligonucleotide microarrays to analyze global gene expression in blood samples of 15 manifesting and 15 non-manifesting mutation carriers in order to identify ...[more]

PMID: 20053375

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Dataset Information

Blood expression profiles define penetrance in DYT1 dystonia patients

Publications

Expression profiling in peripheral blood reveals signature for penetrance in DYT1 dystonia.

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